BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0420300 Os09g0420300|AK120582
(411 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G57970.1 | chr5:23467316-23468910 FORWARD LENGTH=348 295 4e-80
AT1G80850.1 | chr1:30385607-30387272 REVERSE LENGTH=328 261 6e-70
AT1G15970.1 | chr1:5486544-5488494 REVERSE LENGTH=353 258 4e-69
AT1G75090.1 | chr1:28187647-28189612 REVERSE LENGTH=330 246 2e-65
AT1G13635.1 | chr1:4674248-4675784 FORWARD LENGTH=312 217 1e-56
AT3G12710.1 | chr3:4040572-4041828 REVERSE LENGTH=313 198 6e-51
AT5G44680.1 | chr5:18024461-18025893 REVERSE LENGTH=354 197 1e-50
>AT5G57970.1 | chr5:23467316-23468910 FORWARD LENGTH=348
Length = 347
Score = 295 bits (754), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 125/199 (62%), Positives = 158/199 (79%), Gaps = 7/199 (3%)
Query: 164 ALTGPP-------RCPWVTPNTDPCYAAFHDHEWGVPVHDDKKLFEMLVLSGALAEMTWP 216
AL PP RC WVTPN+DPCY FHD EWGVPVHDDK+LFE+LVLSGALAE TWP
Sbjct: 142 ALDSPPNGSETKKRCTWVTPNSDPCYIVFHDEEWGVPVHDDKRLFELLVLSGALAEHTWP 201
Query: 217 AILSKRETFKEVFMDFDPLLVAKLSERKILGPCSPARSLLSEHRLRIIIENAQEVLKVIE 276
ILSKR+ F+EVF DFDP + K++E+KI+GP SPA +LLS+ +LR +IENA+++LKVIE
Sbjct: 202 TILSKRQAFREVFADFDPNAIVKINEKKIIGPGSPASTLLSDLKLRAVIENARQILKVIE 261
Query: 277 EFGSFDNYCWGFLNSKPMVGRFRHPREVPMKTPKADAMSQDLLRRGFLGVGPTVIYAFMQ 336
E+GSFD Y W F+ +K +V +FR+ R+VP KTPKA+ +S+DL+RRGF VGPTV+Y+FMQ
Sbjct: 262 EYGSFDKYIWSFVKNKAIVSKFRYQRQVPAKTPKAEVISKDLVRRGFRSVGPTVVYSFMQ 321
Query: 337 AVGMANDHLVTCYRFGECC 355
A G+ NDHL +C+RF C
Sbjct: 322 AAGITNDHLTSCFRFHHCI 340
>AT1G80850.1 | chr1:30385607-30387272 REVERSE LENGTH=328
Length = 327
Score = 261 bits (666), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 144/188 (76%)
Query: 167 GPPRCPWVTPNTDPCYAAFHDHEWGVPVHDDKKLFEMLVLSGALAEMTWPAILSKRETFK 226
G RC W+TP +D CY AFHD EWGVPVHDDK+LFE+L LSGALAE++W ILSKR+ F+
Sbjct: 132 GRKRCAWITPKSDQCYIAFHDEEWGVPVHDDKRLFELLSLSGALAELSWKDILSKRQLFR 191
Query: 227 EVFMDFDPLLVAKLSERKILGPCSPARSLLSEHRLRIIIENAQEVLKVIEEFGSFDNYCW 286
EVFMDFDP+ +++L+ +KI P A +LLSE +LR I+ENA +V K+I FGSFD Y W
Sbjct: 192 EVFMDFDPIAISELTNKKITSPEIAATTLLSEQKLRSILENANQVCKIIGAFGSFDKYIW 251
Query: 287 GFLNSKPMVGRFRHPREVPMKTPKADAMSQDLLRRGFLGVGPTVIYAFMQAVGMANDHLV 346
F+N KP +FR+PR+VP+KT KA+ +S+DL+RRGF V PTVIY+FMQ G+ NDHL
Sbjct: 252 NFVNQKPTQSQFRYPRQVPVKTSKAELISKDLVRRGFRSVSPTVIYSFMQTAGLTNDHLT 311
Query: 347 TCYRFGEC 354
C+R +C
Sbjct: 312 CCFRHHDC 319
>AT1G15970.1 | chr1:5486544-5488494 REVERSE LENGTH=353
Length = 352
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 146/189 (77%)
Query: 167 GPPRCPWVTPNTDPCYAAFHDHEWGVPVHDDKKLFEMLVLSGALAEMTWPAILSKRETFK 226
G RC W+TP DPCY AFHD EWGVPVHDDKKLFE+L LSGALAE++W ILS+R +
Sbjct: 143 GRKRCAWITPKADPCYVAFHDEEWGVPVHDDKKLFELLCLSGALAELSWTDILSRRHILR 202
Query: 227 EVFMDFDPLLVAKLSERKILGPCSPARSLLSEHRLRIIIENAQEVLKVIEEFGSFDNYCW 286
EVFMDFDP+ VA+L+++K+ P + A SLLSE ++R I++N++ V K+I E GS Y W
Sbjct: 203 EVFMDFDPVAVAELNDKKLTAPGTAAISLLSEVKIRSILDNSRHVRKIIAECGSLKKYMW 262
Query: 287 GFLNSKPMVGRFRHPREVPMKTPKADAMSQDLLRRGFLGVGPTVIYAFMQAVGMANDHLV 346
F+N+KP +FR+ R+VP+KT KA+ +S+DL+RRGF V PTVIY+FMQA G+ NDHL+
Sbjct: 263 NFVNNKPTQSQFRYQRQVPVKTSKAEFISKDLVRRGFRSVSPTVIYSFMQAAGLTNDHLI 322
Query: 347 TCYRFGECC 355
C+R+ +CC
Sbjct: 323 GCFRYQDCC 331
>AT1G75090.1 | chr1:28187647-28189612 REVERSE LENGTH=330
Length = 329
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 157/222 (70%), Gaps = 2/222 (0%)
Query: 160 EAAPALTGP-PRCPWVTPNTDPCYAAFHDHEWGVPVHDDKKLFEMLVLSGALAEMTWPAI 218
+ +P + GP RC W+TPN+DP Y FHD EWGVPV DDKKLFE+LV S ALAE +WP+I
Sbjct: 109 DISPKIPGPVKRCHWITPNSDPIYVLFHDEEWGVPVRDDKKLFELLVFSQALAEFSWPSI 168
Query: 219 LSKRETFKEVFMDFDPLLVAKLSERKILGPCSPARSLLSEHRLRIIIENAQEVLKVIEEF 278
L +R+ F+++F +FDP +A+ +E++++ +LSE +LR I+ENA+ VLKV +EF
Sbjct: 169 LRRRDDFRKLFEEFDPSAIAQFTEKRLMSLRVNGCLILSEQKLRAIVENAKSVLKVKQEF 228
Query: 279 GSFDNYCWGFLNSKPMVGRFRHPREVPMKTPKADAMSQDLLRRGFLGVGPTVIYAFMQAV 338
GSF NYCW F+N KP+ +R+ R+VP+K+PKA+ +S+D+++RGF VGPTV+Y+F+QA
Sbjct: 229 GSFSNYCWRFVNHKPLRNGYRYGRQVPVKSPKAEYISKDMMQRGFRCVGPTVMYSFLQAS 288
Query: 339 GMANDHLVTCYRFGECCSCSSSTEXXXXXXMDGADNHSKSMV 380
G+ NDHL C+R+ E C+ + E D HS +V
Sbjct: 289 GIVNDHLTACFRYQE-CNVETERETKSHETETKLDLHSPLLV 329
>AT1G13635.1 | chr1:4674248-4675784 FORWARD LENGTH=312
Length = 311
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 134/191 (70%)
Query: 168 PPRCPWVTPNTDPCYAAFHDHEWGVPVHDDKKLFEMLVLSGALAEMTWPAILSKRETFKE 227
P RC W+T +D Y FHD +WGVPV+DD LFE L +SG L + W IL ++E F+E
Sbjct: 114 PKRCNWITKKSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRKEHFRE 173
Query: 228 VFMDFDPLLVAKLSERKILGPCSPARSLLSEHRLRIIIENAQEVLKVIEEFGSFDNYCWG 287
F +FDP VAK+ E++I S +L E R+R I++NA+ + KV+ EFGSF ++ WG
Sbjct: 174 AFCEFDPNRVAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFSSFVWG 233
Query: 288 FLNSKPMVGRFRHPREVPMKTPKADAMSQDLLRRGFLGVGPTVIYAFMQAVGMANDHLVT 347
F++ KP++ +F++ R VP+++PKA+ +S+D+++RGF VGP ++++FMQA G+ DHLV
Sbjct: 234 FMDYKPIINKFKYSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTIDHLVD 293
Query: 348 CYRFGECCSCS 358
C+R G+C S +
Sbjct: 294 CFRHGDCVSLA 304
>AT3G12710.1 | chr3:4040572-4041828 REVERSE LENGTH=313
Length = 312
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 132/188 (70%), Gaps = 2/188 (1%)
Query: 168 PPRCPWVTPNTDPCYAAFHDHEWGVPVHDDKKLFEMLVLSGALAEMTWPAILSKRETFKE 227
P RC ++TP +DP Y A+HD EWGVPVHDDK LFE+L LSGA W + L KR +++
Sbjct: 121 PQRCSFLTPTSDPIYVAYHDEEWGVPVHDDKTLFELLTLSGAQVGSDWTSTLRKRHDYRK 180
Query: 228 VFMDFDPLLVAKLSERKILGPCSPARSLLSEHRLRIIIENAQEVLKVIEEFGSFDNYCWG 287
FM+F+ +VAKL+E+++ + +S ++R ++ENA++++++ + F S + Y WG
Sbjct: 181 AFMEFEAEVVAKLTEKEMNAISIEYKIEMS--KVRGVVENAKKIVEIKKAFVSLEKYLWG 238
Query: 288 FLNSKPMVGRFRHPREVPMKTPKADAMSQDLLRRGFLGVGPTVIYAFMQAVGMANDHLVT 347
F+N KP+ ++ ++P+KT K++++S+D++RRGF VGPTV+++FMQA G+ NDHL+T
Sbjct: 239 FVNHKPISTNYKLGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLIT 298
Query: 348 CYRFGECC 355
C R C
Sbjct: 299 CCRHAPCT 306
>AT5G44680.1 | chr5:18024461-18025893 REVERSE LENGTH=354
Length = 353
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 135/195 (69%), Gaps = 12/195 (6%)
Query: 170 RCPWVTPNTDPCYAAFHDHEWGVPVHDDKKLFEMLVLSGALAEMTWPAILSKRETFKEVF 229
RC ++T ++DP Y A+HD EWGVPVHDD LFE+LVL+GA W ++L +R TF+E F
Sbjct: 165 RCSFITTSSDPIYVAYHDKEWGVPVHDDNLLFELLVLTGAQVGSDWTSVLKRRNTFREAF 224
Query: 230 MDFDPLLVAKLSERKILGPCSPARSLLSEHRLRI-----IIENAQEVLKVIEEFGSFDNY 284
F+ LVA +E+KI +S+++++ + + +++NA+++LKV + GSF+ Y
Sbjct: 225 SGFEAELVADFNEKKI-------QSIVNDYGINLSQVLAVVDNAKQILKVKRDLGSFNKY 277
Query: 285 CWGFLNSKPMVGRFRHPREVPMKTPKADAMSQDLLRRGFLGVGPTVIYAFMQAVGMANDH 344
WGF+ KP+ ++ +++P+KT K++ +S+D++RRGF VGPTVI++ MQA G+ NDH
Sbjct: 278 IWGFMKHKPVTTKYTSCQKIPVKTSKSETISKDMVRRGFRFVGPTVIHSLMQAAGLTNDH 337
Query: 345 LVTCYRFGECCSCSS 359
L+TC R EC + ++
Sbjct: 338 LITCPRHLECTAMAA 352
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.133 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,782,892
Number of extensions: 245995
Number of successful extensions: 479
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 477
Number of HSP's successfully gapped: 7
Length of query: 411
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 310
Effective length of database: 8,337,553
Effective search space: 2584641430
Effective search space used: 2584641430
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)