BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0416800 Os09g0416800|AK065377
(280 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G32070.1 | chr2:13640829-13641656 REVERSE LENGTH=276 394 e-110
AT1G80780.3 | chr1:30358517-30359583 FORWARD LENGTH=287 380 e-106
AT5G10960.1 | chr5:3464581-3465414 FORWARD LENGTH=278 347 4e-96
AT1G15920.2 | chr1:5469962-5470822 FORWARD LENGTH=287 309 1e-84
AT3G44260.1 | chr3:15952213-15953055 REVERSE LENGTH=281 263 6e-71
AT5G22250.1 | chr5:7365605-7366441 REVERSE LENGTH=279 256 9e-69
AT1G06450.1 | chr1:1965924-1967006 FORWARD LENGTH=361 149 2e-36
AT1G61470.1 | chr1:22678185-22679021 FORWARD LENGTH=279 111 4e-25
AT1G27820.1 | chr1:9691628-9692560 FORWARD LENGTH=311 100 1e-21
AT1G27890.1 | chr1:9714136-9715044 REVERSE LENGTH=303 98 5e-21
AT3G44240.1 | chr3:15940184-15940903 FORWARD LENGTH=240 91 9e-19
>AT2G32070.1 | chr2:13640829-13641656 REVERSE LENGTH=276
Length = 275
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 177/267 (66%), Positives = 220/267 (82%)
Query: 8 KPDGVEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNADFNYATL 67
K D ++IREVW DNLE+E A+IRE+VDDFP+VAMDTEFPG+VCRP+GTFK+N +++Y TL
Sbjct: 6 KDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEYHYETL 65
Query: 68 KANVDMLKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADSIDLLRRS 127
K NV++LK+IQLGLTFS+E G LP+ G + + C+WQFNFR FD +D+ A DSI+LLR+S
Sbjct: 66 KTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQS 125
Query: 128 GIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDFXXXXXXXXXXXXPDTIT 187
GIDF +++ G D++RFAELLMSSG+V+N V WVTFHSGYDF P+T T
Sbjct: 126 GIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQT 185
Query: 188 GFFDLIRIYFPVVYDIKHLMRFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLTALSFK 247
GFF++I +YFP VYDIKHLM+FCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT+ +F+
Sbjct: 186 GFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLTSCTFR 245
Query: 248 KLKEAYFNGLTEKYAGVLYGLGTEGGE 274
KL+E +F G EKY+GVLYGLG E G+
Sbjct: 246 KLQENFFIGSMEKYSGVLYGLGVENGQ 272
>AT1G80780.3 | chr1:30358517-30359583 FORWARD LENGTH=287
Length = 286
Score = 380 bits (975), Expect = e-106, Method: Compositional matrix adjust.
Identities = 175/265 (66%), Positives = 213/265 (80%), Gaps = 1/265 (0%)
Query: 8 KPDGVEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNADFNYATL 67
K D ++IREVW DNL+ E +IR++VDDFPYVAMDTEFPG+V RP+GTFKSNAD++Y TL
Sbjct: 6 KDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADYHYETL 65
Query: 68 KANVDMLKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADSIDLLRRS 127
K NV++LK+IQLGLTFSNE G LP+ G + + C+WQFNFR FD +D+ A DSI+LL++S
Sbjct: 66 KTNVNILKMIQLGLTFSNEQGNLPTCGTD-KYCIWQFNFREFDLDSDIFALDSIELLKQS 124
Query: 128 GIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDFXXXXXXXXXXXXPDTIT 187
GID +++ DG D++RFAELLMSSG+V+N V WVTFHSGYDF PD+ T
Sbjct: 125 GIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQT 184
Query: 188 GFFDLIRIYFPVVYDIKHLMRFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLTALSFK 247
FF LI +YFP VYDIKHLM+FCNSLHGGLNKLAELL+VERVGICHQAGSDSLLT+ +F+
Sbjct: 185 DFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTFR 244
Query: 248 KLKEAYFNGLTEKYAGVLYGLGTEG 272
KLKE +F G KY+GVLYGLG E
Sbjct: 245 KLKENFFVGPLHKYSGVLYGLGVEN 269
>AT5G10960.1 | chr5:3464581-3465414 FORWARD LENGTH=278
Length = 277
Score = 347 bits (890), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 167/273 (61%), Positives = 201/273 (73%), Gaps = 1/273 (0%)
Query: 8 KPDGVEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNADFNYATL 67
K D + IREVW+ NL EFA+IREIVD F Y+AMDTEFPGVV +P+ TFK N D NY TL
Sbjct: 6 KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65
Query: 68 KANVDMLKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADSIDLLRRS 127
K NVD+LKLIQ+GLTFS+E+G LP+ G + + C+WQFNFR F+ D+ A++SI+LLR+
Sbjct: 66 KENVDLLKLIQVGLTFSDENGNLPTCGTD-KFCIWQFNFREFNIGEDIYASESIELLRQC 124
Query: 128 GIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDFXXXXXXXXXXXXPDTIT 187
GIDF ++ G D RF EL+MSSG+V+N + WVTFH GYDF P
Sbjct: 125 GIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQA 184
Query: 188 GFFDLIRIYFPVVYDIKHLMRFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLTALSFK 247
FF L+ +YFP VYDIKHLM FCN L GGLN+LAEL+ VERVGICHQAGSDSLLT SF+
Sbjct: 185 DFFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFR 244
Query: 248 KLKEAYFNGLTEKYAGVLYGLGTEGGETSSAAH 280
KLKE YF G TEKY GVLYGLG E G T++ A+
Sbjct: 245 KLKERYFPGSTEKYTGVLYGLGVEDGTTTTVAN 277
>AT1G15920.2 | chr1:5469962-5470822 FORWARD LENGTH=287
Length = 286
Score = 309 bits (791), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 151/273 (55%), Positives = 194/273 (71%), Gaps = 7/273 (2%)
Query: 2 ATPAAEKPDGVEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPL------GT 55
A E+ D +EIREVW NLE E A+I + +DDFPYVAMDTEFPG+VC+ +
Sbjct: 4 APNPEEEDDTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNP 63
Query: 56 FKSNADFNYATLKANVDMLKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDV 115
+ + ++NY TLKANV+MLKLIQLGLT S+E G LP+ G + C+WQFNFR F+ +D+
Sbjct: 64 YSIHYEYNYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGT-NKQCIWQFNFREFNVISDM 122
Query: 116 AAADSIDLLRRSGIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDFXXXXX 175
A DSI+LLR+S ID +++ G DA+RFAELLM SGVV+N ++ WVTFH GYDF
Sbjct: 123 FALDSIELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLK 182
Query: 176 XXXXXXXPDTITGFFDLIRIYFPVVYDIKHLMRFCNSLHGGLNKLAELLDVERVGICHQA 235
P+ I+ FFD + +FPVVYDIK+LM FC +L+GGL K+AELL V+RVGI HQA
Sbjct: 183 LLSGKELPEEISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQA 242
Query: 236 GSDSLLTALSFKKLKEAYFNGLTEKYAGVLYGL 268
GSDSLLT +F K+KE +F G KY+G L+GL
Sbjct: 243 GSDSLLTLRTFIKMKEFFFTGSLLKYSGFLFGL 275
>AT3G44260.1 | chr3:15952213-15953055 REVERSE LENGTH=281
Length = 280
Score = 263 bits (673), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/268 (52%), Positives = 184/268 (68%), Gaps = 8/268 (2%)
Query: 8 KPDGVEI--REVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNADFNYA 65
KPDGV + REVW +NLE+EF +I EI+DD+P+++MDTEFPGV+ + F +N D Y
Sbjct: 11 KPDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRF-TNPDDLYT 69
Query: 66 TLKANVDMLKLIQLGLTFSNEHGGLPSLGPE-GRPCVWQFNFRGFDPRTDVAAADSIDLL 124
LKANVD L LIQ+GLT S+ +G LP LG + R +W+FNFR FD D A DSI+LL
Sbjct: 70 LLKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELL 129
Query: 125 RRSGIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDFXXXXXXXXXXXXPD 184
RR GIDF R+ DG ++ RFAEL+MSSG+V N EV WVTFHS YDF P
Sbjct: 130 RRQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPG 189
Query: 185 TITGFFDLIRIYF-PVVYDIKHLMRFC-NSLHGGLNKLAELLDVER-VGICHQAGSDSLL 241
+ F ++R+ F VYD+KH+M+FC L GGL+++A L+V R VG CHQAGSDSLL
Sbjct: 190 ALGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLL 249
Query: 242 TALSFKKLKEAYF-NGLTEKYAGVLYGL 268
T +F+++++ YF EK+AGVLYGL
Sbjct: 250 TWHAFQRMRDLYFVQDGPEKHAGVLYGL 277
>AT5G22250.1 | chr5:7365605-7366441 REVERSE LENGTH=279
Length = 278
Score = 256 bits (654), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 137/275 (49%), Positives = 183/275 (66%), Gaps = 7/275 (2%)
Query: 1 MATPAAEKPDGVEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRP-LGTFKS- 58
M A+ D + IR+VW NLE+EF +IR IV+D+P+++MDTEFPGV+ + L +
Sbjct: 1 MIKSEADLSDVIVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRG 60
Query: 59 NADFNYATLKANVDMLKLIQLGLTFSNEHGGLPSLG-PEGRPCVWQFNFRGFDPRTDVAA 117
N ++ Y LK+NVD L LIQ+GLT S+ G LP LG + R +W+FNFR FD D A
Sbjct: 61 NPNYLYNLLKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHA 120
Query: 118 ADSIDLLRRSGIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDFXXXXXXX 177
DSI+LLRR GIDF R+ +G ++ RFAEL+MSSG++ N V WVTFHS YDF
Sbjct: 121 PDSIELLRRHGIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKIL 180
Query: 178 XXXXXPDTITGFFDLIRIYF-PVVYDIKHLMRFCNS-LHGGLNKLAELLDVER-VGICHQ 234
P + F L+R +F VYD+KH+MRFC L+GGL+++A L+V R VG CHQ
Sbjct: 181 TRRQLPVALREFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQ 240
Query: 235 AGSDSLLTALSFKKLKEAYF-NGLTEKYAGVLYGL 268
AGSDSLLT +F+++++ YF EK+AGVLYGL
Sbjct: 241 AGSDSLLTWQAFQRMRDLYFVEDGAEKHAGVLYGL 275
>AT1G06450.1 | chr1:1965924-1967006 FORWARD LENGTH=361
Length = 360
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 133/261 (50%), Gaps = 21/261 (8%)
Query: 15 REVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNADFNYATLKANVDML 74
R VW N++ E A + E + FP +A DTE+PG++ R F S++D Y +K NV+
Sbjct: 10 RRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTY--FDSSSDECYRAMKGNVENT 67
Query: 75 KLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADSIDLLRRSGIDFTRH 134
KLIQ G T N G + VW+ NF F +D SI+ LRR G+D +
Sbjct: 68 KLIQCGFTLFNAKGEIGG--------VWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKI 119
Query: 135 SADGAD--ARRFAELLMSSGVVMNSE--VRWVTFHSGYDFXXXXXXXXXXXXPDTITGFF 190
+G D F LM+ V S+ V +VTF YDF P+T F
Sbjct: 120 RDEGVDMFGYGFFPKLMT---VFRSQKHVEFVTFQGAYDFAYFLSILNHGKLPETHGEFA 176
Query: 191 DLIRIYFPVVYDIKHLMRFCNSL--HGGLNKLAELLDVERVGICHQAGSDSLLTALSFKK 248
+ F VYD K + FC L H GL+KLA+LL + RVG H AGSDSL+TAL F K
Sbjct: 177 TEVVKVFGQVYDTKVMAGFCEGLGEHLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIK 236
Query: 249 LKEAYFNGLTEKYAGVLYGLG 269
LK Y + + G++YG+G
Sbjct: 237 LKHVYEDSRFAR--GLIYGIG 255
>AT1G61470.1 | chr1:22678185-22679021 FORWARD LENGTH=279
Length = 278
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 111/240 (46%), Gaps = 21/240 (8%)
Query: 16 EVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNADFNYATLKANVDMLK 75
EVW N +AE IR+ + +A+DTEFPG C ++ + Y +K NVD
Sbjct: 4 EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPG--CLKETPMDASDEIRYRDMKFNVDNTH 61
Query: 76 LIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADSIDLLRRSGIDFTRHS 135
LIQLGLT L +G W+ N F+ + SI L+ +G+D +
Sbjct: 62 LIQLGLT----------LFGKGITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIR 111
Query: 136 ADGADARRFAELLMSSGVVMNSE---VRWVTFHSGYDFXXXXXXXXXXXXPDTITGFFDL 192
+G E M ++N + +RWVTF YD P+T F +
Sbjct: 112 EEGIG---IEEFFMEFSQILNEKHGKMRWVTFQGSYDKAYLLKGLTRKPLPETSKEFDET 168
Query: 193 IRIYF-PVVYDIKHLMRFCNSLHG--GLNKLAELLDVERVGICHQAGSDSLLTALSFKKL 249
++ VYD+K + C+ L GL ++A++L + RVG H AGSDS LTA F KL
Sbjct: 169 VQQLLGRFVYDVKKMAGLCSGLSSRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKL 228
>AT1G27820.1 | chr1:9691628-9692560 FORWARD LENGTH=311
Length = 310
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 109/242 (45%), Gaps = 23/242 (9%)
Query: 16 EVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNADFNYATLKANVDMLK 75
EVW N E E IR+ + +A+DTEFPG C ++ + Y +K NVD
Sbjct: 8 EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPG--CLKETPMDASEEIRYRDMKFNVDNTH 65
Query: 76 LIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADSIDLLRRSGI--DFTR 133
LIQLG T + G + W+ N FD SI L+ +G+ D R
Sbjct: 66 LIQLGFTLFDRRGFAKT---------WEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIR 116
Query: 134 HSADGADA--RRFAELLMSSGVVMNSEVRWVTFHSGYDFXXXXXXXXXXX-XPDTITGFF 190
G D R F+++L + ++ WV F YD P+T F
Sbjct: 117 EEGIGIDEFFRDFSQILTEK----DGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFH 172
Query: 191 DLIRIYF-PVVYDIKHLMRFCNSLHG--GLNKLAELLDVERVGICHQAGSDSLLTALSFK 247
+ ++ V+D+K + C+ L GL ++A++L ++RVG H AGSDS LTA F
Sbjct: 173 ETVQQLLGKFVFDVKKIAESCSGLSSQFGLQRIADVLQMKRVGKAHHAGSDSELTARVFT 232
Query: 248 KL 249
KL
Sbjct: 233 KL 234
>AT1G27890.1 | chr1:9714136-9715044 REVERSE LENGTH=303
Length = 302
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 111/242 (45%), Gaps = 23/242 (9%)
Query: 16 EVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNADFNYATLKANVDMLK 75
EVW N E E IR+ + F +A+DTEFPG C ++ + Y +K NVD
Sbjct: 3 EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPG--CLKETPMDASEEIRYRDMKFNVDNTH 60
Query: 76 LIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADSIDLLRRSGIDFTRHS 135
LIQLG T + G + W+ N F+ SI L+ +G++ +
Sbjct: 61 LIQLGFTLFDRRGITKT---------WEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIG 111
Query: 136 ADGADA----RRFAELLMSSGVVMNSEVRWVTFHSGYDFXXXXXXXXXXX-XPDTITGFF 190
+G R F+++L + ++ WV F YD P+T F
Sbjct: 112 EEGIGIEEFFRDFSQILKEK----DGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFH 167
Query: 191 DLI-RIYFPVVYDIKHLMRFCNSLHG--GLNKLAELLDVERVGICHQAGSDSLLTALSFK 247
+ + ++ V+D+K + C+ L GL ++A++L ++RVG H AGSDS LTA F
Sbjct: 168 ETVEQLLGKFVFDVKKIAESCSGLSSRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFT 227
Query: 248 KL 249
KL
Sbjct: 228 KL 229
>AT3G44240.1 | chr3:15940184-15940903 FORWARD LENGTH=240
Length = 239
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 98/225 (43%), Gaps = 13/225 (5%)
Query: 27 AVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNADFNYATLKANVDMLKLIQLGLTFSNE 86
++I + + + ++A+DTEFP + T + + Y + +VD KLIQLGLT +
Sbjct: 2 SLIEDCLRSYRFIAIDTEFPSTLRET--TQHATDEERYMDMSFSVDRAKLIQLGLTLFDI 59
Query: 87 HGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADSIDLLRRSGIDFTRHSADGADARRFAE 146
+G + W+ NF F D SI+ LRR+G+D + +G F
Sbjct: 60 NGRIGG--------TWEINFSDFGV-DDARNEKSIEFLRRNGLDLRKIREEGIRIEGFFS 110
Query: 147 LLMSSGVVMNSEVRWVTFHSGYDFXXXXXXXXXXXXPDTITGFFDLIRIYFPVVYDIKHL 206
+ + WVTFH YD P T F + VYD+K +
Sbjct: 111 EMFWMLKKTRRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVM 170
Query: 207 MRFCNSLHG--GLNKLAELLDVERVGICHQAGSDSLLTALSFKKL 249
C L GL LA + RVG H AGS++ LTA+ F K+
Sbjct: 171 AGRCEGLSSRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKV 215
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.139 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,975,408
Number of extensions: 241346
Number of successful extensions: 459
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 427
Number of HSP's successfully gapped: 11
Length of query: 280
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 183
Effective length of database: 8,447,217
Effective search space: 1545840711
Effective search space used: 1545840711
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)