BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0389000 Os09g0389000|Os09g0389000
         (399 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02570.1  | chr3:543463-545478 REVERSE LENGTH=433              378   e-105
AT1G67070.1  | chr1:25042324-25044412 FORWARD LENGTH=442          369   e-102

>AT3G02570.1 | chr3:543463-545478 REVERSE LENGTH=433
          Length = 432

 Score =  378 bits (971), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/409 (48%), Positives = 264/409 (64%), Gaps = 30/409 (7%)

Query: 16  CAVQHYEWGRRGAASIVARL----ADQQ-DP--------------------DLXXXXXXX 50
           C+V+ Y+WG+ G+ S+V R+    +D + DP                    D        
Sbjct: 25  CSVKDYDWGKIGSDSLVYRVYAANSDYEIDPTRPYAELWMGTHESGPSYLEDADGSNGVT 84

Query: 51  XXXXXXXXXXXXXXXXLQAGAGNAGYV-QVLSVAKALSIQAHPDKKRAEALHALRPSVYK 109
                           L+    +  ++ +VLSVA+ LSIQAHPDKK A+ +H   P++YK
Sbjct: 85  LRSWITENPKSLGNRVLEKWGCDLPFLFKVLSVARPLSIQAHPDKKLAKKMHKAHPNLYK 144

Query: 110 DDNHKPEMAIAITEFRALYGFAAIQELKDVLRTVPEVEGLIGHEHAAKLMSFKEYDAGNQ 169
           DDNHKPEMA+A T+F AL GF  +QELK V+R +PE+E L+G E A ++    E+D   +
Sbjct: 145 DDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCITEHDE-EK 203

Query: 170 VKSTLQSAFANLMLASKDMVSEALSKLISRLNIESKIRTLTDKEELVLSLERQYQEDVGV 229
           VKS +++ F  LM A  D   + +SKL  RL++ES+ R LTDKE LVL LE+QY  D+GV
Sbjct: 204 VKSVVRTIFTLLMSADADTTKKIVSKLKRRLHMESQERQLTDKERLVLKLEKQYPNDIGV 263

Query: 230 LAALFFNYVKLSPGEALHIGANEPHAYLSGECIECMATSDNVVRAGLTPKYKDIQTLCSM 289
           ++A FFNYVKL+PGEAL++GANEPHAYL GEC+E MATSDNVVRAGLT K  DIQTLCSM
Sbjct: 264 ISAFFFNYVKLNPGEALYLGANEPHAYLFGECLEVMATSDNVVRAGLTSKPLDIQTLCSM 323

Query: 290 LTYKQAFPEILQGVPVQPHVRRYSPPFDEFEVDWCLVPADEVVTISSVPGPSVFLVITGE 349
           L+YK  +PEIL+G  ++P++ RY PPF+EFEVD C +P+       SVPGPS+ LV+ GE
Sbjct: 324 LSYKLGYPEILKGTRIRPYITRYLPPFEEFEVDLCDLPSGASTVFPSVPGPSLLLVLQGE 383

Query: 350 GELHAESLSGGKKEAKEGDVFFVPAYTEINLSTHKSMQLYRAGVNSRFF 398
           G +  E+ + G      GDV FVPA TEI+L +   ++LYRAG+NSRF 
Sbjct: 384 GRMSTEASADG---ISMGDVLFVPADTEIHLRSSSDLKLYRAGINSRFL 429



>AT1G67070.1 | chr1:25042324-25044412 FORWARD LENGTH=442
          Length = 441

 Score =  369 bits (947), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 177/322 (54%), Positives = 240/322 (74%), Gaps = 4/322 (1%)

Query: 78  QVLSVAKALSIQAHPDKKRAEALHALRPSVYKDDNHKPEMAIAITEFRALYGFAAIQELK 137
           +VLSV KALSIQAHP+K  AE LH   P +Y+D+NHKPE+A+A+T F+AL GF  ++ELK
Sbjct: 120 KVLSVTKALSIQAHPNKALAEKLHREDPLLYRDNNHKPEIALAVTPFQALCGFVTLKELK 179

Query: 138 DVLRTVPEVEGLIGHEHAAKLMSFKEYDAGNQVKSTLQSAFANLMLASKDMVSEALSKLI 197
           +V+  VPE+  L+G + A ++ +  E+D   ++KS ++  F  LM AS +   + +S++ 
Sbjct: 180 EVITNVPEITELVGSKAADQIFNVHEHDEDERIKSVVRLIFTQLMSASNNETKQVVSRMK 239

Query: 198 SRLNIESKIRTLTDKEELVLSLERQYQEDVGVLAALFFNYVKLSPGEALHIGANEPHAYL 257
           +RL +E+K R L++KE+LVL LE+QY  D+GV++A FFNYVKL+PGEAL++ ANEPHAY+
Sbjct: 240 NRLLLETKHRELSEKEKLVLELEKQYTGDIGVISAFFFNYVKLNPGEALYLDANEPHAYI 299

Query: 258 SGECIECMATSDNVVRAGLTPKYKDIQTLCSMLTYKQAFPEILQGVPVQPHVRRYSPPFD 317
           SG+C+ECMA SDNVVRAGLTPK++D+QTLCSMLTYK  +PEIL+G P+ P+V RY PPFD
Sbjct: 300 SGDCVECMAASDNVVRAGLTPKHRDVQTLCSMLTYKLGYPEILKGFPLTPYVTRYLPPFD 359

Query: 318 EFEVDWCLVPADEVVTISSVPGPSVFLVITGEGELHAESLSGGKKEAKEGDVFFVPAYTE 377
           EFEVD C +P  +     +VPGPSV+LVI G+G+L   S    K     GDV FVPA  E
Sbjct: 360 EFEVDHCDLPRGKSTVFPAVPGPSVYLVIEGKGQLRTGS---SKVLVNRGDVLFVPADIE 416

Query: 378 INLSTHKS-MQLYRAGVNSRFF 398
           I+++     M+LYRAGV+SRFF
Sbjct: 417 IHVTGESDVMKLYRAGVSSRFF 438



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.133    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,536,806
Number of extensions: 297513
Number of successful extensions: 714
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 709
Number of HSP's successfully gapped: 2
Length of query: 399
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 298
Effective length of database: 8,337,553
Effective search space: 2484590794
Effective search space used: 2484590794
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)