BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0386500 Os09g0386500|AK064072
(216 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G22140.1 | chr4:11728556-11730230 REVERSE LENGTH=235 333 4e-92
AT4G39100.1 | chr4:18218298-18220134 REVERSE LENGTH=229 279 7e-76
AT4G04260.1 | chr4:2054636-2055849 FORWARD LENGTH=194 240 5e-64
AT4G14700.1 | chr4:8422236-8424665 FORWARD LENGTH=810 57 5e-09
AT4G12620.1 | chr4:7459812-7462253 REVERSE LENGTH=814 54 7e-08
AT4G11560.1 | chr4:7000095-7003445 REVERSE LENGTH=588 53 1e-07
AT4G23120.1 | chr4:12113308-12115523 FORWARD LENGTH=361 52 2e-07
>AT4G22140.1 | chr4:11728556-11730230 REVERSE LENGTH=235
Length = 234
Score = 333 bits (854), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 147/193 (76%), Positives = 172/193 (89%)
Query: 2 AKTKQGKKDVESYTIKGTTKIVRVGDCVLMRASDTEKAPYVGRVERLETDGRGSVRVRVR 61
+K K G+K+++SYTIKGT K+VR GDCVLMR SD K PYV RVE++E D R +V+V R
Sbjct: 10 SKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCR 69
Query: 62 WYYRPEESKGGRRQFHGAKELFLSDHFDTQSAHTIEGKCVVHSFKNYTKLDNVGPEDFFC 121
WYYRPEES GGRRQFHGAKELFLSDHFD QSAHTIEGKC+VH+FKNYT+L+NVG ED++C
Sbjct: 70 WYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYYC 129
Query: 122 RFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEQAKKLDHF 181
RFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDW+HP+C+GMTIE+AKKLDHF
Sbjct: 130 RFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHF 189
Query: 182 LCADCVKENGTKR 194
+CA+C ++ K+
Sbjct: 190 VCAECSSDDDVKK 202
>AT4G39100.1 | chr4:18218298-18220134 REVERSE LENGTH=229
Length = 228
Score = 279 bits (714), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 129/187 (68%), Positives = 150/187 (80%), Gaps = 1/187 (0%)
Query: 1 MAKTKQGKKDVESYTIKGTTKIVRVGDCVLMRASDTEKAPYVGRVERLETDGRGS-VRVR 59
M K K +K ++SY +K K ++ GD VLMR+S+ K YV RVE +ETD RGS +VR
Sbjct: 1 MPKQKAPRKQLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVR 60
Query: 60 VRWYYRPEESKGGRRQFHGAKELFLSDHFDTQSAHTIEGKCVVHSFKNYTKLDNVGPEDF 119
VRWYYRPEES GGRRQFHGAKE+FLSDHFD QSA TIEGKC VHSF +YTKLD+VG +DF
Sbjct: 61 VRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDF 120
Query: 120 FCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEQAKKLD 179
FCRFEY + TGAF PDRV V+CKCEMPYNPDDLMVQCE C +WFHPSC+G TIE+AKK D
Sbjct: 121 FCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPD 180
Query: 180 HFLCADC 186
+F C +C
Sbjct: 181 NFYCEEC 187
>AT4G04260.1 | chr4:2054636-2055849 FORWARD LENGTH=194
Length = 193
Score = 240 bits (612), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 113/165 (68%), Positives = 134/165 (81%), Gaps = 2/165 (1%)
Query: 31 MRASDTEKAPYVGRVERLETDGRGSVRVRVRWYYRPEESKGGRRQFHGAKELFLSDHFDT 90
MR SD KAPYV RVE++E D R +V+V RWYY PEES GGRRQ HGAKELFLSDHFD
Sbjct: 1 MRPSDAGKAPYVARVEKIEADARNNVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFDV 60
Query: 91 QSAHTIEGKCVVHSFKNYTKLDNVGPEDFFCRFEYKAATGAFTPDRVAVYCKCEMPYNPD 150
QSAHTIEGKC+VH+FKNYT+L+NVG ED++C F+YKAATGAFTPDRVAVY KCEMPYN D
Sbjct: 61 QSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYNSD 120
Query: 151 DLMVQCEGCKDWFHPSCMGMTIEQAKKLDHFLCADCVK-ENGTKR 194
+LM + C H +C+G+TIE+AKKL+HF+C +C E+G KR
Sbjct: 121 ELM-ELLLCHYRVHLACVGVTIEEAKKLEHFVCVECSSDEDGVKR 164
>AT4G14700.1 | chr4:8422236-8424665 FORWARD LENGTH=810
Length = 809
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 41 YVGRVERL--ETDGRGSVRVRVRWYYRPEESKGGRRQFHGAKELFLSDHFDTQSAHTIEG 98
+ R+E+L E D G +R RWY PEE+ GR++ + +EL+L++ F +
Sbjct: 245 WAARIEKLWKEVDD-GVYWIRARWYMIPEETVLGRQRHNLKRELYLTNDFADIEMECVLR 303
Query: 99 KCVVHSFKNYTKLDNVGPEDFFCRFEYKAATGAF 132
C V K ++K N G + F C +EY G+F
Sbjct: 304 HCFVKCPKEFSKASNDGDDVFLCEYEYDVHWGSF 337
>AT4G12620.1 | chr4:7459812-7462253 REVERSE LENGTH=814
Length = 813
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 41 YVGRVERL--ETDGRGSVRVRVRWYYRPEESKGGRRQFHGAKELFLSDHFDTQSAHTIEG 98
+ R+++L E D G +R RWY PEE+ GR+ + +EL+L++ F I
Sbjct: 248 WAARIDKLWKEVDD-GVYWIRARWYMIPEETVSGRQPHNLKRELYLTNDFADIEMECILR 306
Query: 99 KCVVHSFKNYTKLDNVGPEDFFCRFEYKAATGAF 132
C V K ++K N G + F C +EY +F
Sbjct: 307 HCSVKCPKEFSKASNDGDDVFLCEYEYDVHWRSF 340
>AT4G11560.1 | chr4:7000095-7003445 REVERSE LENGTH=588
Length = 587
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 29 VLMRASDTEKAPYVGRVERLETDGRGSVRVRVRWYYRPEESK---GGRRQFHGAKELFLS 85
VL+ D + PYV ++ + GS+ + +W+YRPEE++ GG Q +ELF S
Sbjct: 137 VLLVPEDKSQKPYVAIIKDITQTKDGSMMILGQWFYRPEEAEKRGGGNWQSSDTRELFYS 196
Query: 86 DHFDTQSAHTIEGKCVVHSFKNYTKL 111
H D A ++ +CVV+ + +L
Sbjct: 197 FHRDEVPAESVMHRCVVYFVPAHKQL 222
>AT4G23120.1 | chr4:12113308-12115523 FORWARD LENGTH=361
Length = 360
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 27 DCVLMRASDTEKAPYVGRVERLETDGR-GSVRVRVRWYYRPEESKG---GRRQFHGAKEL 82
D VL+ D EK PYV ++ + T + G V++ V+W YRPEE + G + G+++L
Sbjct: 63 DSVLLVPEDGEK-PYVAIIKDIYTQRKEGHVKLEVQWLYRPEEVEKKYVGNWKSKGSRDL 121
Query: 83 FLSDHFDTQSAHTIEGKCVVHSFKNYTKLDN 113
F S H D A +++ C+VH + ++ N
Sbjct: 122 FYSFHRDEVFAESVKDDCIVHFVQENKQIPN 152
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.136 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,802,570
Number of extensions: 198571
Number of successful extensions: 475
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 482
Number of HSP's successfully gapped: 7
Length of query: 216
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 122
Effective length of database: 8,529,465
Effective search space: 1040594730
Effective search space used: 1040594730
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)