BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0386400 Os09g0386400|AK063271
         (409 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G19560.1  | chr2:8465924-8469069 REVERSE LENGTH=414            525   e-149

>AT2G19560.1 | chr2:8465924-8469069 REVERSE LENGTH=414
          Length = 413

 Score =  525 bits (1353), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 253/410 (61%), Positives = 317/410 (77%), Gaps = 3/410 (0%)

Query: 3   AYLSMGEAHRRIADYXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXDALSAFPDFPRL 61
           AY+SMGEAHRRI +Y                                 DAL+ F D   L
Sbjct: 2   AYVSMGEAHRRITEYLNRFCDAVSYQDSSTLCRLLSFSSNSPPLLSLADALNVFQDSSSL 61

Query: 62  --AADRYPHLSDLLPPLLRAIHSHSLRRFADAYSSFEKAANAFLQEFRNWETPWAMEAMH 119
              +DR+    ++L  + R++ S+ +    +AY +F+K ANAF+QEFRNWE+ WA+EA++
Sbjct: 62  IRQSDRFSEYGEILAHVFRSLQSYRVGNLVEAYLAFDKFANAFVQEFRNWESAWALEALY 121

Query: 120 TVALEIRLLAEKADRELATSGKNPDKLQSAGSFLMKVFGALAVKGPKRIGALYVTCQLFK 179
            V  EIR+LAEKAD++L ++GK+P+KL++AGS LMKVFG LA KGPKR+GALYVTCQLFK
Sbjct: 122 VVCYEIRVLAEKADKDLTSNGKSPEKLKAAGSLLMKVFGVLAGKGPKRVGALYVTCQLFK 181

Query: 180 IYFRLGTVHLCRSVIRSIETARNFDFEDFPVKDKVTYMYYTGRLEVFNENFLVADQKLTY 239
            YF+LGTV+LCRSVIRSIETAR FDFE+FP +DKVTYMYYTGRLEVFNENF  AD KL+Y
Sbjct: 182 TYFKLGTVNLCRSVIRSIETARIFDFEEFPRRDKVTYMYYTGRLEVFNENFPAADTKLSY 241

Query: 240 ALVHCNPQYESNLRRILKFLIPVKLSIGVLPRITLLERYNLLEYADVVTSLKRGDLRLLR 299
           AL +CNP+ E N+R ILK+L+PVKLS+G++P+  LL  YNL EY  +V +L++GDLRLLR
Sbjct: 242 ALQNCNPKRERNIRMILKYLVPVKLSLGIIPKDELLRNYNLHEYTKIVQALRKGDLRLLR 301

Query: 300 QALERHEDQFLKSGVYLVLEKLELQVYQRLVKKIHIIQRQKEPAKAHQIKLEVVVKALKW 359
            AL+ HED+FL+SGVYLVLEKLELQVYQRL+KKI+I Q+  +PA+AHQ+KLE + KAL+W
Sbjct: 302 HALQEHEDRFLRSGVYLVLEKLELQVYQRLMKKIYINQKLSDPARAHQLKLEGIAKALRW 361

Query: 360 LEIDMDVDEVECIMACLIYKNLIKGYFAHKSKVLVLSKQDPFPKLNGKPV 409
           L++DMD+DEVECIM  LIYKNL+KGY AHKSKV+VLSKQDPFPKLNGKPV
Sbjct: 362 LDMDMDLDEVECIMTILIYKNLVKGYLAHKSKVVVLSKQDPFPKLNGKPV 411



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.325    0.139    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,720,142
Number of extensions: 300772
Number of successful extensions: 982
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 983
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 308
Effective length of database: 8,337,553
Effective search space: 2567966324
Effective search space used: 2567966324
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 113 (48.1 bits)