BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0373300 Os09g0373300|Os09g0373300
(200 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08470.1 | chr1:2682262-2683977 REVERSE LENGTH=391 125 2e-29
AT3G57030.1 | chr3:21101653-21103204 REVERSE LENGTH=375 119 2e-27
AT5G22020.1 | chr5:7287878-7289357 REVERSE LENGTH=396 117 4e-27
AT3G57010.1 | chr3:21095854-21097316 REVERSE LENGTH=377 114 5e-26
AT3G57020.1 | chr3:21098515-21100303 REVERSE LENGTH=371 110 4e-25
AT2G41290.1 | chr2:17210599-17212904 REVERSE LENGTH=377 108 1e-24
AT3G59530.1 | chr3:21993710-21995164 FORWARD LENGTH=404 102 2e-22
AT2G41300.1 | chr2:17214312-17216292 REVERSE LENGTH=395 98 3e-21
AT1G74000.1 | chr1:27829266-27831401 REVERSE LENGTH=330 97 8e-21
AT1G74020.1 | chr1:27835289-27837277 REVERSE LENGTH=336 87 7e-18
AT1G74010.1 | chr1:27832432-27834017 REVERSE LENGTH=326 80 5e-16
AT3G51430.1 | chr3:19086548-19087909 FORWARD LENGTH=372 48 4e-06
>AT1G08470.1 | chr1:2682262-2683977 REVERSE LENGTH=391
Length = 390
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 89/139 (64%), Gaps = 7/139 (5%)
Query: 65 VTGPESLAFDGRGDGPYTGGSDXXXXXXXXXXXXXTEFAYNSRHKSISVCSPEKKLV--- 121
V GPES+AFD +G GPYTG +D T+FAY S ++S +C P+ L+
Sbjct: 67 VQGPESIAFDPQGRGPYTGVADGRILFWNGTRW--TDFAYTSNNRS-ELCDPKPSLLDYL 123
Query: 122 VPESVCGRPLGLQFHHASGDLYVADAYLGLLRAPAHGGLAEVVATEAAGVPFNFLNGLDV 181
E +CGRPLGL+F +GDLY+ADAYLG+++ GGLA V EA GVP F N LD+
Sbjct: 124 KDEDICGRPLGLRFDKKNGDLYIADAYLGIMKVGPEGGLATSVTNEADGVPLRFTNDLDI 183
Query: 182 DQRTGDVYFTDSSTTYRRR 200
D G+VYFTDSS+ ++RR
Sbjct: 184 DDE-GNVYFTDSSSFFQRR 201
>AT3G57030.1 | chr3:21101653-21103204 REVERSE LENGTH=375
Length = 374
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 91/154 (59%), Gaps = 8/154 (5%)
Query: 49 TKSIDPSLAVMTLPAPVTGPESLAFDGRGDGPYTGGSDXXXXXXXXXXXXXTEFAYNS-- 106
++ + PS V+ L +GPES+AFD G+GPY G SD ++FA+ S
Sbjct: 39 SRDVFPSAKVVNLTG-ASGPESIAFDPAGEGPYVGVSDGRILKWRGEPLGWSDFAHTSSN 97
Query: 107 RHKSISVCSPEKKLVVPESVCGRPLGLQFHHASGDLYVADAYLGLLRAPAHGGLAEVVAT 166
R + +PE E VCGRPLGL+F +GDLY+ADAY GLL GGLA+ + T
Sbjct: 98 RQECARPFAPEL-----EHVCGRPLGLRFDKKTGDLYIADAYFGLLVVGPAGGLAKPLVT 152
Query: 167 EAAGVPFNFLNGLDVDQRTGDVYFTDSSTTYRRR 200
EA G PF F N LD+D++ +YFTD+S ++RR
Sbjct: 153 EAEGQPFRFTNDLDIDEQEDVIYFTDTSARFQRR 186
>AT5G22020.1 | chr5:7287878-7289357 REVERSE LENGTH=396
Length = 395
Score = 117 bits (293), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 85/139 (61%), Gaps = 7/139 (5%)
Query: 65 VTGPESLAFDGRGDGPYTGGSDXXXXXXXXXXXXXTEFAYNSRHKSISVCSPEKK---LV 121
+ GPES+AFD G GPYTG +D +FAY S ++S +C P+ +
Sbjct: 73 IQGPESVAFDSLGRGPYTGVADGRVLFWDGEKW--IDFAYTSSNRS-EICDPKPSALSYL 129
Query: 122 VPESVCGRPLGLQFHHASGDLYVADAYLGLLRAPAHGGLAEVVATEAAGVPFNFLNGLDV 181
E +CGRPLGL+F +GDLY+ADAY+GLL+ GGLA + TEA GVP F N LD+
Sbjct: 130 RNEHICGRPLGLRFDKRTGDLYIADAYMGLLKVGPEGGLATPLVTEAEGVPLGFTNDLDI 189
Query: 182 DQRTGDVYFTDSSTTYRRR 200
G VYFTDSS +Y+RR
Sbjct: 190 AD-DGTVYFTDSSISYQRR 207
>AT3G57010.1 | chr3:21095854-21097316 REVERSE LENGTH=377
Length = 376
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 78/141 (55%), Gaps = 6/141 (4%)
Query: 60 TLPAPVTGPESLAFDGRGDGPYTGGSDXXXXXXXXXXXXXTEFAYNSRHKSISVCSPEKK 119
T+P PV GPESL FD +G+GPY G +D +FAY S H+ CS +
Sbjct: 47 TIPLPVDGPESLEFDPQGEGPYVGVTDGRILKWRGEELGWVDFAYTSPHRD--NCSSHE- 103
Query: 120 LVVPESVCGRPLGLQFHHASGDLYVADAYLGLLRAPAHGGLAEVVATEAAGVPFNFLNGL 179
VVP CGRPLGL F +GDLY+ D Y G+++ GGLAE+V EA G F N
Sbjct: 104 -VVPS--CGRPLGLSFERKTGDLYICDGYFGVMKVGPEGGLAELVVDEAEGRKVMFANQG 160
Query: 180 DVDQRTGDVYFTDSSTTYRRR 200
D+D+ YF DSS TY R
Sbjct: 161 DIDEEEDIFYFNDSSDTYHFR 181
>AT3G57020.1 | chr3:21098515-21100303 REVERSE LENGTH=371
Length = 370
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 60 TLPAPVTGPESLAFDGRGDGPYTGGSDXXXXXXXXXXXXXTEFAYNSRHKSISVCSPEKK 119
T+P PV GPES+ FD +G+GPY D +FAY S H+ CS K
Sbjct: 46 TIPIPVAGPESIEFDPKGEGPYAAVVDGRILKWRGDDLGWVDFAYTSPHRG--NCS--KT 101
Query: 120 LVVPESVCGRPLGLQFHHASGDLYVADAYLGLLRAPAHGGLAEVVATEAAGVPFNFLNGL 179
VVP CGRPLGL F +GDLY+ D YLGL++ GGLAE++ EA G F N
Sbjct: 102 EVVP--TCGRPLGLTFEKKTGDLYICDGYLGLMKVGPEGGLAELIVDEAEGRKVMFANQG 159
Query: 180 DVDQRTGDVYFTDSSTTYRRR 200
D+D+ YF DSS Y R
Sbjct: 160 DIDEEEDVFYFNDSSDKYHFR 180
>AT2G41290.1 | chr2:17210599-17212904 REVERSE LENGTH=377
Length = 376
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 67 GPESLAFDGRGDGPYTGGSDXXXXXXXXXXXXXTEFAYNSRHKSISVCSPEKKLVVPESV 126
GPES FD GDGPYTG SD +FA + + C + E V
Sbjct: 51 GPESFVFDFFGDGPYTGLSDGRIVKWLANESRWIDFAVTTSARE--GCEGPHEHQRTEHV 108
Query: 127 CGRPLGLQFHHASGDLYVADAYLGLLRAPAHGGLAEVVATEAAGVPFNFLNGLDVDQRTG 186
CGRPLGL F ++GDLY+ADAY+GLL+ GG+A V F N LD++ RTG
Sbjct: 109 CGRPLGLAFDKSTGDLYIADAYMGLLKVGPTGGVATQVLPRELNEALRFTNSLDINPRTG 168
Query: 187 DVYFTDSSTTYRRR 200
VYFTDSS+ Y+RR
Sbjct: 169 VVYFTDSSSVYQRR 182
>AT3G59530.1 | chr3:21993710-21995164 FORWARD LENGTH=404
Length = 403
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 65 VTGPESLAFDGRGDGPYTGGSDXXXXXXXXXXXXXTEFAYNSRHKSISVC-----SPEKK 119
V GPESL FD G GPYTG +D F+ + S C S K
Sbjct: 82 VFGPESLEFDSLGRGPYTGLADGRVVRWMGEAIGWETFSVVTSKWSEEACVRGVDSTTNK 141
Query: 120 LVVPESVCGRPLGLQFHHASGDLYVADAYLGLLRAPAHGGLAEVVATEAAGVPFNFLNGL 179
E +CGRPLGL+FH +G+LY+ADAY GLL GG+A +AT G P F N L
Sbjct: 142 QWKHEKLCGRPLGLRFHKETGNLYIADAYYGLLVVGPEGGIATPLATHVEGKPILFANDL 201
Query: 180 DVDQRTGDVYFTDSSTTYRR 199
D+ R G ++FTD+S Y R
Sbjct: 202 DI-HRNGSIFFTDTSKRYDR 220
>AT2G41300.1 | chr2:17214312-17216292 REVERSE LENGTH=395
Length = 394
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Query: 73 FDGRGDGPYTGGSDXXXXXXXXXXXXXTEFAYNSRHKSISVCSPEKKLVVPESVCGRPLG 132
D RG+GPY G +D EFAY+S H+ CS K E CGRPLG
Sbjct: 84 LDPRGEGPYVGVTDGRILKWSGEDLGWIEFAYSSPHRK--NCSSHK----VEPACGRPLG 137
Query: 133 LQFHHASGDLYVADAYLGLLRAPAHGGLAEVVATEAAGVPFNFLNGLDVDQRTGDVYFTD 192
L F SGDLY D YLG+++ GGLAE V E G F N +D+D+ +YF D
Sbjct: 138 LSFEKKSGDLYFCDGYLGVMKVGPKGGLAEKVVDEVEGQKVMFANQMDIDEEEDAIYFND 197
Query: 193 SSTTY 197
SS TY
Sbjct: 198 SSDTY 202
>AT1G74000.1 | chr1:27829266-27831401 REVERSE LENGTH=330
Length = 329
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Query: 55 SLAVMTLPAPVTGPESLAFDGRGDGPYTGGSDXXXXXXXXXXXXXTEFAYNSRHKSISVC 114
S + +P TGPE+ AFD G G YTG + +FA + S+C
Sbjct: 28 SFQKLPVPGNRTGPEAFAFDSTGKGFYTGVT-GGKILKYLPKKGYVDFAQITNSSKSSLC 86
Query: 115 SPEKKLVVPESVCGRPLGLQFHHASGDLYVADAYLGLLRAPAHGGLAEVVATEAAGVPFN 174
E CGRP G+ F+ +GDLYVADA LGL P GGLA+ +A G PF
Sbjct: 87 DGALGTTNVEK-CGRPAGIAFNTKTGDLYVADAALGLHVIPRRGGLAKKIADSVGGKPFL 145
Query: 175 FLNGLDVDQRTGDVYFTDSSTTYRRR 200
FL+GLDVD TG VYFT S+T+ R
Sbjct: 146 FLDGLDVDPTTGVVYFTSFSSTFGPR 171
>AT1G74020.1 | chr1:27835289-27837277 REVERSE LENGTH=336
Length = 335
Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 53 DPSLAVMTLPAPVTGPESLAFDGRGDGPYTGGSDXXXXXXXXXXXXXTEFAYNSRHKSIS 112
D S + +P +GPE+ AFD G G YTG S +FA + + S
Sbjct: 24 DASFQKLPVPETRSGPEAFAFDSTGKGFYTGVS-GGKILKYLPETGYVDFAQITESSNSS 82
Query: 113 VCSPEKKLVVPESVCGRPLGLQFHHASGDLYVADAYLGLLRAPAHGGLAEVVATEAAGVP 172
C + CGRP G+ F+ +GDLYVADA LGL GGLA + G P
Sbjct: 83 WCDGTIGTALAGR-CGRPAGIAFNEKTGDLYVADAPLGLHVISPAGGLATKITDSVDGKP 141
Query: 173 FNFLNGLDVDQRTGDVYFTDSSTTY 197
F FL+GLDVD TG VYFT S+ +
Sbjct: 142 FKFLDGLDVDPTTGVVYFTSFSSRF 166
>AT1G74010.1 | chr1:27832432-27834017 REVERSE LENGTH=326
Length = 325
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 53 DPSLAVMTLPAPVTGPESLAFDGRGDGPYTGGSDXXXXXXXXXXXXXTEFAYNSRHKSIS 112
D S + +P +GPES AFD G G YTG S +FA + + +
Sbjct: 23 DASFQKLPVPDKRSGPESFAFDSTG-GFYTGVS-GGKILKYVPGKGYVDFAQITDSSNSA 80
Query: 113 VCSPEKKLVVPESVCGRPLGLQFHHASGDLYVADAYLGLLRAPAHGGLAEVVATEAAGVP 172
C+ CGRP G+ + +GDLYVADA LGL GGLA +A G P
Sbjct: 81 WCNGALGTAFAGK-CGRPAGIALNSKTGDLYVADAPLGLHVISPAGGLATKLADSVDGKP 139
Query: 173 FNFLNGLDVDQRTGDVYFTDSSTTYRRR 200
F FL+GLDVD TG VYFT S+ + R
Sbjct: 140 FKFLDGLDVDPTTGVVYFTSFSSKFGPR 167
>AT3G51430.1 | chr3:19086548-19087909 FORWARD LENGTH=372
Length = 371
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 109 KSISVCSPEKKLVVPESVC--GRPLGLQFHHASGDLYVADAYLGLLRAPAHGGLAEVVAT 166
K +SV VV + V GRPLG+ F G++ VADAY GLL G E++
Sbjct: 92 KRVSVHDSANDSVVEDWVNTGGRPLGIAFG-VHGEVIVADAYKGLLNISGDGKKTELLTD 150
Query: 167 EAAGVPFNFLNGLDVDQRTGDVYFTDSSTTY 197
+A GV F + + V G +YFTD+S Y
Sbjct: 151 QAEGVKFKLTDVVAV-ADNGVLYFTDASYKY 180
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,704,002
Number of extensions: 139530
Number of successful extensions: 296
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 279
Number of HSP's successfully gapped: 14
Length of query: 200
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 106
Effective length of database: 8,529,465
Effective search space: 904123290
Effective search space used: 904123290
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 109 (46.6 bits)