BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0370000 Os09g0370000|Os09g0370000
         (374 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G78110.1  | chr1:29391879-29392907 FORWARD LENGTH=343          123   2e-28
AT1G22230.1  | chr1:7850093-7851037 FORWARD LENGTH=315             77   1e-14

>AT1G78110.1 | chr1:29391879-29392907 FORWARD LENGTH=343
          Length = 342

 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 141/361 (39%), Gaps = 50/361 (13%)

Query: 27  DLLVCFPPRQHLALMPKPICSPSRTTVDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 86
           DLLVCFP R HLAL PKPICSPSR +                                  
Sbjct: 19  DLLVCFPSRTHLALTPKPICSPSRPS---------DSSTNRRPHHRRQLSKLSGGGGGGH 69

Query: 87  XXPLFRGSKAKQAAVEVDD--EPQSPKVTCVGQIKVARPKKQRKVAGKPXXXXXXXXXXX 144
             P+    +A    +  D+  EP SPKVTC GQIKV RP    K  G+            
Sbjct: 70  GSPVLWAKQASSKNMGGDEIAEPTSPKVTCAGQIKV-RPS---KCGGR------------ 113

Query: 145 XXRSWITVVEEIERLHEQRKKVSWLEAVGIRRDALPFLGGALRSLRLKVRCFGSL-HGAV 203
             ++W +V+EEIER+H+ R +  +    G+++D + FL   LR+++   RCFG   H  V
Sbjct: 114 -GKNWQSVMEEIERIHDNRSQSKFF---GLKKDVMGFL-TCLRNIKFDFRCFGDFRHADV 168

Query: 204 ESSTXXXXXXXXXGRGAEEHEXXXXXXXXXXXXXXFSKWLMVLEGSEETPEQXXXXXXXX 263
            S               +E E              FSKW MVL+  EE   +        
Sbjct: 169 TSDDDEEEDDD-----DDEEEEVVEGEEEENSKTVFSKWFMVLQ--EEQNNKDDDKNNNK 221

Query: 264 XXXXXXXXCXXXXXXXXXXXXXXXMRCRSAPAKGLARRRTE---------EPPPPVGXXX 314
                                   MRCRSAPAK     R +         E         
Sbjct: 222 CDEKRDLEDTETEPAVPPPNALLLMRCRSAPAKSWLEERMKVKTEQEKREEQKEEKETED 281

Query: 315 XXXXXXXXXXXXXXXXXXXXXXLVFMRTAPDFLKLSIDIAKETWIVGGV-DPLARSRSWK 373
                                 LV MR   +F +LS DIAKETW+VGG+ DPL+RSRSWK
Sbjct: 282 QETSMKTKKKDLRSLMEEEKMELVLMRYDTEFYRLSSDIAKETWVVGGIQDPLSRSRSWK 341

Query: 374 R 374
            
Sbjct: 342 N 342



>AT1G22230.1 | chr1:7850093-7851037 FORWARD LENGTH=315
          Length = 314

 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 104/282 (36%), Gaps = 48/282 (17%)

Query: 102 EVDDEPQSPKVTCVGQIKVARPKKQRKVAGKPXXXXXXXXXXXXXRSWITVVEEIERLHE 161
           EV +EP SPKVTC GQIKV   K  R   GK               +W +++ EIE++H 
Sbjct: 72  EVVEEPTSPKVTCAGQIKVRSSK--RDGGGK---------------NWQSLMAEIEKIHR 114

Query: 162 QRKKVSWLEAVGIRRDALPFLGGALRSLRLKVRCFGSLHGAVESSTXXXXXXXXXGRGAE 221
            + +  +    GI+RD + FL   LR      RCFG+                      E
Sbjct: 115 SKSESKFF---GIKRDVMGFL-TCLRDFDF--RCFGAF-------PPVDIISDDEEEDEE 161

Query: 222 EHEXXXXXXXXXXXXXXFSKWLMVLEGSEETPEQXXXXXXXXXXXXXXXXCXXXXXXXXX 281
           E E              FSKWLMVL   +   E                           
Sbjct: 162 EEEEDEEEDEDESSGTVFSKWLMVLHEKQNNEE---------CVDGKENVFSDVETAVPP 212

Query: 282 XXXXXXMRCRSAPAKGLARRRTEEPPPPVGXXXXXXXXX--------XXXXXXXXXXXXX 333
                 MRCRSAP K  +  + EE                                    
Sbjct: 213 PNALLLMRCRSAPVKNWSEEKKEETEEGDNRVKQSGEEEEEEKDRVGNKKDLRSLMEEEK 272

Query: 334 XXXLVFMRTAPDFLKLSIDIAKETWIVGGV-DPLARSRSWKR 374
              LV M    ++ KLS DIAKETW+VGG+ DPL RSRSWK+
Sbjct: 273 KMNLVVMNYDTNYYKLSNDIAKETWVVGGIQDPLFRSRSWKK 314



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.135    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,140,076
Number of extensions: 126238
Number of successful extensions: 261
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 255
Number of HSP's successfully gapped: 5
Length of query: 374
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 274
Effective length of database: 8,364,969
Effective search space: 2292001506
Effective search space used: 2292001506
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)