BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0364500 Os09g0364500|J100031B16
         (434 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10620.1  | chr4:6564297-6566402 FORWARD LENGTH=598            241   7e-64
AT3G57180.1  | chr3:21163663-21166006 REVERSE LENGTH=661          175   5e-44
AT3G47450.1  | chr3:17483195-17486249 REVERSE LENGTH=562           52   7e-07

>AT4G10620.1 | chr4:6564297-6566402 FORWARD LENGTH=598
          Length = 597

 Score =  241 bits (614), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 128/254 (50%), Positives = 164/254 (64%), Gaps = 8/254 (3%)

Query: 171 CARCHSLRHYGVVKRPEAEPLLPDFDFVAAVGPRLASPSGARSLVLLLADASDFDGSFPX 230
           CARCHSLRHYG VK P  E LLPDFDF   VG RL S SGAR++VL++ DASDFDGSFP 
Sbjct: 163 CARCHSLRHYGRVKDPTVENLLPDFDFDHTVGRRLGSASGARTVVLMVVDASDFDGSFPK 222

Query: 231 XXXXXXXXXGEAHGSDWKHGAPANLPRALLVVTKXXXXXXXXXXXXXVHAWAHSXXXXXX 290
                     + +   WK G   N+PR ++VVTK                W         
Sbjct: 223 RVAKLVSRTIDENNMAWKEGKSGNVPRVVVVVTKIDLLPSSLSPNR-FEQWVR--LRARE 279

Query: 291 XXXXXXXXVHLVSAARGWGVRDLLDHVRQLAGSRGNVWAVGARNVGKSTLLNAIARCSGI 350
                   +H VS  + WG++DL++ V  +AG RG+VWAVG++N GKSTL+NA+ +   +
Sbjct: 280 GGLSKITKLHFVSPVKNWGIKDLVEDVAAMAGKRGHVWAVGSQNAGKSTLINAVGK---V 336

Query: 351 EGGPT--LTEAPVPGTTLDVIQVDGVLGSQAKLFDTPGLLHGHQLTSRLTREEQKLVRVS 408
            GG    LTEAPVPGTTL +I+++GVL  +AKLFDTPGLL+ HQ+T+RLTREEQ+LV +S
Sbjct: 337 VGGKVWHLTEAPVPGTTLGIIRIEGVLPFEAKLFDTPGLLNPHQITTRLTREEQRLVHIS 396

Query: 409 KEMRPRTYRLKVIY 422
           KE++PRTYR+K  Y
Sbjct: 397 KELKPRTYRIKEGY 410



>AT3G57180.1 | chr3:21163663-21166006 REVERSE LENGTH=661
          Length = 660

 Score =  175 bits (443), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/251 (41%), Positives = 154/251 (61%), Gaps = 8/251 (3%)

Query: 171 CARCHSLRHYGVVKRPEAEPLLPDFDFVAAVGPRLASP--SGARSLVLLLADASDFDGSF 228
           CARCHSLR+YG VK   AE LLPDFDF   +  RL  P  + + ++V+++ D  DFDGSF
Sbjct: 242 CARCHSLRNYGQVKNQAAENLLPDFDFDRLISTRLIKPMSNSSTTVVVMVVDCVDFDGSF 301

Query: 229 PXXXXXXXXXXGEAHGSDWKHGAPANLPRALLVVTKXXXXXXXXXXXXXVHAWAHSXXXX 288
           P           +   +D K     NLP+ +LV TK             +  W       
Sbjct: 302 PKRAAKSLFQVLQKAENDPK--GSKNLPKLVLVATKVDLLPTQISPAR-LDRWVRHRAKA 358

Query: 289 XXXXXXXXXXVHLVSAARGWGVRDLLDHVRQLAGSRGNVWAVGARNVGKSTLLNAIARCS 348
                     V++VSA +  GV++LL ++++LAG RGNVW +GA+N GKSTL+NA+++  
Sbjct: 359 GGAPKLSG--VYMVSARKDIGVKNLLAYIKELAGPRGNVWVIGAQNAGKSTLINALSKKD 416

Query: 349 GIEGGPTLTEAPVPGTTLDVIQVDGVLGSQAKLFDTPGLLHGHQLTSRLTREEQKLVRVS 408
           G +    LTEAPVPGTTL ++++ G+L ++AK++DTPGLLH + ++ RL  EE+K+V + 
Sbjct: 417 GAKV-TRLTEAPVPGTTLGILKIGGILSAKAKMYDTPGLLHPYLMSLRLNSEERKMVEIR 475

Query: 409 KEMRPRTYRLK 419
           KE++PR+YR+K
Sbjct: 476 KEVQPRSYRVK 486



>AT3G47450.1 | chr3:17483195-17486249 REVERSE LENGTH=562
          Length = 561

 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 16/142 (11%)

Query: 299 VHLVSAARGWGVRDLLDHVRQLAGSRGNVWAVGARNVGKSTLLNAIARCSGIEGGPTL-- 356
           VHL S+    GV  +   +++    R +V+ +GA NVGKS  +NA+ +    E  P    
Sbjct: 255 VHLTSSKSLDGVSGVASEIQKEKKGR-DVYILGAANVGKSAFINALLKTMA-ERDPVAAA 312

Query: 357 ------TEAPVPGTTLDVIQVDGVLGSQAKLFDTPGLLHGHQLTSRLTREEQKLVRVSKE 410
                  ++ VPGTTL  IQ++  +G + KL+DTPG+   H+  + +  ++   +     
Sbjct: 313 AQKYKPIQSAVPGTTLGPIQINAFVGGE-KLYDTPGVHLHHRQAAVVHSDDLPALAPQNR 371

Query: 411 MRPRTYRLKVIYICTSPTQPQS 432
           +R +++      I T PTQ  S
Sbjct: 372 LRGQSFD-----ISTLPTQSSS 388



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.135    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,764,925
Number of extensions: 212320
Number of successful extensions: 500
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 496
Number of HSP's successfully gapped: 3
Length of query: 434
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 333
Effective length of database: 8,337,553
Effective search space: 2776405149
Effective search space used: 2776405149
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)