BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0361200 Os09g0361200|Os09g0361200
(317 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G62740.1 | chr5:25201320-25202535 FORWARD LENGTH=287 497 e-141
AT1G69840.1 | chr1:26293932-26295150 REVERSE LENGTH=287 470 e-133
AT3G01290.1 | chr3:88252-89356 REVERSE LENGTH=286 449 e-126
AT5G51570.1 | chr5:20949511-20951234 FORWARD LENGTH=293 348 2e-96
AT4G27585.1 | chr4:13766984-13769832 REVERSE LENGTH=412 57 1e-08
AT5G54100.1 | chr5:21954035-21956500 REVERSE LENGTH=402 57 2e-08
>AT5G62740.1 | chr5:25201320-25202535 FORWARD LENGTH=287
Length = 286
Score = 497 bits (1280), Expect = e-141, Method: Compositional matrix adjust.
Identities = 234/275 (85%), Positives = 262/275 (95%), Gaps = 1/275 (0%)
Query: 40 KIDQSTVAIKENFGKFSEVLEPGCHFLPWCIGQQIAGYLSLRVKQLDVRCETKTKDNVFV 99
++DQSTVAIKE FGKF +VLEPGCHFLPWC+G Q+AGYLSLRV+QLDVRCETKTKDNVFV
Sbjct: 9 QVDQSTVAIKETFGKFEDVLEPGCHFLPWCLGSQVAGYLSLRVQQLDVRCETKTKDNVFV 68
Query: 100 TVVASVQYRALADKASDAFYKLSNTREQIQSYVFDVIRATVPKLNLDDAFEQKNDIAKAV 159
VVAS+QYRALA+KA+DA+YKLSNTR QIQ+YVFDVIRA+VPKL LDD FEQKNDIAKAV
Sbjct: 69 NVVASIQYRALANKANDAYYKLSNTRGQIQAYVFDVIRASVPKLLLDDVFEQKNDIAKAV 128
Query: 160 EDELEKAMSAYGYEIVQTLIIDIEPDVHVKRAMNEIN-AGKLRVAANEKAEAEKILQIKK 218
E+ELEKAMSAYGYEIVQTLI+DIEPD HVKRAMNEIN A ++R+AANEKAEAEKILQIK+
Sbjct: 129 EEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARMRLAANEKAEAEKILQIKR 188
Query: 219 AEGEAESKYLAGVGIARQRQAIVDGLRDSVLAFSENVPGTTAKDIMDMVLVTQYFDTMKE 278
AEGEAESKYL+G+GIARQRQAIVDGLRDSVL F+ NVPGTTAKD+MDMVLVTQYFDTMKE
Sbjct: 189 AEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFAVNVPGTTAKDVMDMVLVTQYFDTMKE 248
Query: 279 IGASSKSTSVFIPHGPGAVKDVAAQIRDGLLQANA 313
IGASSKS++VFIPHGPGAV+DVA+QIRDGLLQ ++
Sbjct: 249 IGASSKSSAVFIPHGPGAVRDVASQIRDGLLQGSS 283
>AT1G69840.1 | chr1:26293932-26295150 REVERSE LENGTH=287
Length = 286
Score = 470 bits (1210), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/275 (83%), Positives = 257/275 (93%), Gaps = 1/275 (0%)
Query: 40 KIDQSTVAIKENFGKFSEVLEPGCHFLPWCIGQQIAGYLSLRVKQLDVRCETKTKDNVFV 99
++DQS VAIKE FGKF EVLEPGCH LPWC+G Q+AG+LSLRV+QLDVRCETKTKDNVFV
Sbjct: 9 QVDQSNVAIKETFGKFDEVLEPGCHCLPWCLGSQVAGHLSLRVQQLDVRCETKTKDNVFV 68
Query: 100 TVVASVQYRALADKASDAFYKLSNTREQIQSYVFDVIRATVPKLNLDDAFEQKNDIAKAV 159
TVVAS+QYRALA+ A DAFYKLSNTR QIQ+YVFDVIRA+VPKL+LD FEQKNDIAK V
Sbjct: 69 TVVASIQYRALAESAQDAFYKLSNTRNQIQAYVFDVIRASVPKLDLDSTFEQKNDIAKTV 128
Query: 160 EDELEKAMSAYGYEIVQTLIIDIEPDVHVKRAMNEINAG-KLRVAANEKAEAEKILQIKK 218
E ELEKAMS YGYEIVQTLI+DIEPDVHVKRAMNEINA ++R AA+EKAEAEKILQIK+
Sbjct: 129 ETELEKAMSHYGYEIVQTLIVDIEPDVHVKRAMNEINAASRMREAASEKAEAEKILQIKR 188
Query: 219 AEGEAESKYLAGVGIARQRQAIVDGLRDSVLAFSENVPGTTAKDIMDMVLVTQYFDTMKE 278
AEGEAESKYL+G+GIARQRQAIVDGLR+SVLAFSE+VPGT++KD+MDMVLVTQYFDT+KE
Sbjct: 189 AEGEAESKYLSGMGIARQRQAIVDGLRNSVLAFSESVPGTSSKDVMDMVLVTQYFDTLKE 248
Query: 279 IGASSKSTSVFIPHGPGAVKDVAAQIRDGLLQANA 313
IGASSKS SVFIPHGPGAV+D+A+QIRDGLLQ N+
Sbjct: 249 IGASSKSNSVFIPHGPGAVRDIASQIRDGLLQGNS 283
>AT3G01290.1 | chr3:88252-89356 REVERSE LENGTH=286
Length = 285
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/273 (77%), Positives = 249/273 (91%), Gaps = 1/273 (0%)
Query: 41 IDQSTVAIKENFGKFSEVLEPGCHFLPWCIGQQIAGYLSLRVKQLDVRCETKTKDNVFVT 100
+ QS VA+KE FGKF +VL PG F+PW IG +AG L+LR++QLDV+CETKTKDNVFVT
Sbjct: 10 VKQSDVAVKERFGKFQKVLNPGLQFVPWVIGDYVAGTLTLRLQQLDVQCETKTKDNVFVT 69
Query: 101 VVASVQYRALADKASDAFYKLSNTREQIQSYVFDVIRATVPKLNLDDAFEQKNDIAKAVE 160
VVAS+QYR LADKASDAFY+LSN QI++YVFDVIRA VPKLNLDD FEQKN+IAK+VE
Sbjct: 70 VVASIQYRVLADKASDAFYRLSNPTTQIKAYVFDVIRACVPKLNLDDVFEQKNEIAKSVE 129
Query: 161 DELEKAMSAYGYEIVQTLIIDIEPDVHVKRAMNEIN-AGKLRVAANEKAEAEKILQIKKA 219
+EL+KAM+AYGYEI+QTLIIDIEPD VKRAMNEIN A ++RVAA+EKAEAEKI+QIK+A
Sbjct: 130 EELDKAMTAYGYEILQTLIIDIEPDQQVKRAMNEINAAARMRVAASEKAEAEKIIQIKRA 189
Query: 220 EGEAESKYLAGVGIARQRQAIVDGLRDSVLAFSENVPGTTAKDIMDMVLVTQYFDTMKEI 279
EGEAESKYL+G+GIARQRQAIVDGLRDSVL F+ NVPGT+AKD++DMV++TQYFDTM++I
Sbjct: 190 EGEAESKYLSGLGIARQRQAIVDGLRDSVLGFAGNVPGTSAKDVLDMVMMTQYFDTMRDI 249
Query: 280 GASSKSTSVFIPHGPGAVKDVAAQIRDGLLQAN 312
GA+SKS++VFIPHGPGAV DVAAQIR+GLLQAN
Sbjct: 250 GATSKSSAVFIPHGPGAVSDVAAQIRNGLLQAN 282
>AT5G51570.1 | chr5:20949511-20951234 FORWARD LENGTH=293
Length = 292
Score = 348 bits (894), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 159/274 (58%), Positives = 218/274 (79%), Gaps = 1/274 (0%)
Query: 41 IDQSTVAIKENFGKFSEVLEPGCHFLPWCIGQQIAGYLSLRVKQLDVRCETKTKDNVFVT 100
I+Q++V + E +G+F + EPGCHF GQ +AG LS R+K LDV+ ETKTKDNVFV
Sbjct: 12 IEQASVGVVERWGRFEHIAEPGCHFFNPLAGQWLAGVLSTRIKSLDVKIETKTKDNVFVQ 71
Query: 101 VVASVQYRALADKASDAFYKLSNTREQIQSYVFDVIRATVPKLNLDDAFEQKNDIAKAVE 160
+V S+QYR + A DAFY+L N +EQIQ+YVFDV+RA VP + LD FEQK ++AK+V
Sbjct: 72 LVCSIQYRVVKASADDAFYELQNPKEQIQAYVFDVVRALVPMMTLDALFEQKGEVAKSVL 131
Query: 161 DELEKAMSAYGYEIVQTLIIDIEPDVHVKRAMNEINAG-KLRVAANEKAEAEKILQIKKA 219
+ELEK M AYGY I L++DI PD V++AMNEINA +L++A+ K EAEKILQ+K+A
Sbjct: 132 EELEKVMGAYGYSIEHILMVDIIPDPSVRKAMNEINAAQRLQLASVYKGEAEKILQVKRA 191
Query: 220 EGEAESKYLAGVGIARQRQAIVDGLRDSVLAFSENVPGTTAKDIMDMVLVTQYFDTMKEI 279
E EAE+KYL GVG+ARQRQAI DGLR+++L FS+ V GT+AK++MD++++TQYFDT++++
Sbjct: 192 EAEAEAKYLGGVGVARQRQAITDGLRENILNFSDKVEGTSAKEVMDLIMITQYFDTIRDL 251
Query: 280 GASSKSTSVFIPHGPGAVKDVAAQIRDGLLQANA 313
G SSK+T+VF+PHGPG V+D++ QIR+G+++A A
Sbjct: 252 GNSSKNTTVFLPHGPGHVRDISDQIRNGMMEAAA 285
>AT4G27585.1 | chr4:13766984-13769832 REVERSE LENGTH=412
Length = 411
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 32/238 (13%)
Query: 23 FTSANLNSSSDSPLPRSK-----IDQSTVAIKENFGKFSEVLEPGCHFL-PWCIGQQIAG 76
FTSA S+S P + + + + E FGK++ L G HFL P+ +IA
Sbjct: 43 FTSAGYPSNSFQLTPPTNWGIRIVPERKAFVIERFGKYATTLPSGIHFLIPFV--DRIAY 100
Query: 77 YLSLRVKQLDVRCETK-TKDNVFVTVVASVQYRALADKASDAFYKLSNTREQIQSYVFDV 135
SL+ + + + +T TKDNV + + V Y + D A Y + + +
Sbjct: 101 VHSLKEEAIPIPNQTAITKDNVSIH-IDGVLYVKIVDPKL-ASYGVESPIYAVVQLAQTT 158
Query: 136 IRATVPKLNLDDAFEQKNDIAKAVEDELEKAMSAYGYEIVQTLIIDIEPDVHVKRAMNEI 195
+R+ + K+ LD FE+++ + + + + + A +G + ++ I DI P V+ AM E+
Sbjct: 159 MRSELGKITLDKTFEERDTLNEKIVEAINVAAKDWGLQCLRYEIRDIMPPHGVRAAM-EM 217
Query: 196 NAGKLRVAANEKAEAEKILQIKKAEGEAESKYLAGVGIARQRQAIVDGLRDSVLAFSE 253
A +AE +K QI ++EGE +S I DG + SV+ SE
Sbjct: 218 QA---------EAERKKRAQILESEGERQSHI-----------NIADGKKSSVILASE 255
>AT5G54100.1 | chr5:21954035-21956500 REVERSE LENGTH=402
Length = 401
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 35/236 (14%)
Query: 23 FTSANLNSSSDSPLPRSKIDQSTVAIKENFGKFSEVLEPGCHFL-PWCIGQQIAGYLSLR 81
F S ++N S+ + + + + E FGKF L G HFL P+ +IA SL+
Sbjct: 93 FNSYHINPPSNWGI--RIVPERKACVIERFGKFHTTLPAGIHFLVPFV--DRIAYVHSLK 148
Query: 82 VKQLDVRCETK-TKDNVFVTVVASVQYRALADKASDAFYKLSNTREQIQSYVFDVIRATV 140
+ + + +T TKDNV + + V Y + D A Y + N + +R+ +
Sbjct: 149 EEAIPIGNQTAITKDNVSIH-IDGVLYVKIVDP-KLASYGVENPIYAVMQLAQTTMRSEL 206
Query: 141 PKLNLDDAFEQKNDIAKAVEDELEKAMSAYGYEIVQTLIIDIEPDVHVKRAMNEINAGKL 200
K+ LD FE+++ + + + + + A +G + ++ I DI P V+ AM E+ A
Sbjct: 207 GKITLDKTFEERDTLNEKIVEAINVAAKDWGLQCLRYEIRDIMPPNGVRVAM-EMQA--- 262
Query: 201 RVAANEKAEAEKILQIKKAEGEAESKYLAGVGIARQRQAIV---DGLRDSVLAFSE 253
+AE +K QI ++EGE RQA + DG + SV+ SE
Sbjct: 263 ------EAERKKRAQILESEGE--------------RQAHINRADGKKSSVILESE 298
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.130 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,857,226
Number of extensions: 223100
Number of successful extensions: 640
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 641
Number of HSP's successfully gapped: 6
Length of query: 317
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 218
Effective length of database: 8,392,385
Effective search space: 1829539930
Effective search space used: 1829539930
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 112 (47.8 bits)