BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0322200 Os09g0322200|AK067539
         (187 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19460.1  | chr5:6563112-6565178 FORWARD LENGTH=375            236   5e-63
AT5G19470.1  | chr5:6566357-6568632 FORWARD LENGTH=366            220   3e-58

>AT5G19460.1 | chr5:6563112-6565178 FORWARD LENGTH=375
          Length = 374

 Score =  236 bits (602), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 109/170 (64%), Positives = 132/170 (77%)

Query: 18  AYGVHMNGYVEKEGQKFLWIAKRSDTKQTFPGMLDHLVAGGLPYGISCXXXXXXXXXXXA 77
            YGVHMNGYVE++GQK LWI KRS +K T+PGMLDHLVAGGLP+GISC           A
Sbjct: 205 GYGVHMNGYVERDGQKLLWIGKRSLSKSTYPGMLDHLVAGGLPHGISCGGNLVKECEEEA 264

Query: 78  GIPRSISSNATSVGAISYMDIEGFRYKRDVLFCYDLKLPPDFVPNNEDGEVGSFRLIPVP 137
           GI R+I+  A +VGA+SY+DI+ + +KRDVLFCYDL+LP DFVP N+DGEV SF+LIPV 
Sbjct: 265 GISRAIADRAIAVGAVSYLDIDQYCFKRDVLFCYDLELPEDFVPKNQDGEVESFKLIPVA 324

Query: 138 HAANIIRRTHFFKPNCNLVIIDFLFRHGYINPDYHGYLKLLQSLRRGDCS 187
             A++I++T FFK NC+LVIIDFLFRHG+I P+  GYL L Q LR  DCS
Sbjct: 325 QVASVIKKTSFFKANCSLVIIDFLFRHGFIRPESSGYLDLYQRLRNRDCS 374



>AT5G19470.1 | chr5:6566357-6568632 FORWARD LENGTH=366
          Length = 365

 Score =  220 bits (561), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 103/170 (60%), Positives = 126/170 (74%)

Query: 18  AYGVHMNGYVEKEGQKFLWIAKRSDTKQTFPGMLDHLVAGGLPYGISCXXXXXXXXXXXA 77
            Y +H+NGYVE++GQKFLWI KRS  K T+PG LDHLVAGGLP+GIS            A
Sbjct: 196 GYAIHVNGYVERDGQKFLWIGKRSLAKSTYPGKLDHLVAGGLPHGISVCENLVKECEEEA 255

Query: 78  GIPRSISSNATSVGAISYMDIEGFRYKRDVLFCYDLKLPPDFVPNNEDGEVGSFRLIPVP 137
           GI + ++  A +VG +SYMDI+ + + RDVLFCYDL+LP DFVP N+DGEV SFRLIPV 
Sbjct: 256 GISKVLADRAIAVGVVSYMDIDRYCFTRDVLFCYDLELPQDFVPTNQDGEVDSFRLIPVA 315

Query: 138 HAANIIRRTHFFKPNCNLVIIDFLFRHGYINPDYHGYLKLLQSLRRGDCS 187
             AN++R+T FFK +C+LVIIDFLFRHG I P+  GYL L + LR GDCS
Sbjct: 316 QVANVVRKTSFFKDSCSLVIIDFLFRHGLIRPESPGYLDLYRRLRNGDCS 365



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.326    0.144    0.468 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,455,268
Number of extensions: 180505
Number of successful extensions: 378
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 378
Number of HSP's successfully gapped: 2
Length of query: 187
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 94
Effective length of database: 8,556,881
Effective search space: 804346814
Effective search space used: 804346814
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 108 (46.2 bits)