BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0309200 Os09g0309200|AK109582
(436 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G18750.1 | chr2:8125827-8128363 FORWARD LENGTH=623 233 2e-61
AT5G57580.1 | chr5:23314994-23317683 REVERSE LENGTH=648 227 8e-60
AT1G73805.1 | chr1:27745761-27749178 REVERSE LENGTH=452 227 1e-59
AT2G24300.2 | chr2:10340913-10343457 FORWARD LENGTH=600 221 8e-58
AT4G25800.1 | chr4:13125224-13127765 FORWARD LENGTH=602 218 6e-57
AT4G31000.1 | chr4:15103402-15105799 FORWARD LENGTH=563 207 1e-53
AT5G62570.2 | chr5:25114934-25116967 FORWARD LENGTH=495 197 1e-50
AT5G26920.1 | chr5:9475860-9478448 FORWARD LENGTH=564 163 2e-40
>AT2G18750.1 | chr2:8125827-8128363 FORWARD LENGTH=623
Length = 622
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/316 (41%), Positives = 186/316 (58%), Gaps = 20/316 (6%)
Query: 28 PEAKRKRQTVPSFISVMRGAMAAEKIQKLGLDLEPFFRKAVQEELERSLSKHG--HLLYR 85
PE KR P+ SV+ A+ + +Q+L LEP R+ V EE+ER+L+K G L R
Sbjct: 30 PERKR-----PALASVIVEALKMDSLQRLCSSLEPILRRVVSEEVERALAKLGPARLSER 84
Query: 86 SPPMLVNSVDS-SLKLAFAKRLQLPIFTNNKLVDVDNNPLQVXXXXXXXXXXXXXXXPMI 144
S P + + +L+L F RL +P+FT K+ + V
Sbjct: 85 SSPKRIEGIGGRNLQLQFRSRLSVPLFTGGKIEGEQGAAIHVVLLDMTTGHVLTVGPEAS 144
Query: 145 KKLEVLVLDGDF-SHGDEGWSSDEFSGAIVREREGRRPLLVGTLNVAMADDHLGVAFIDD 203
KL+V+VLDGDF + D+GWS +EF G +V+ER+G+RPLL G + V + + GV + +
Sbjct: 145 AKLDVVVLDGDFNTEDDDGWSGEEFEGHLVKERQGKRPLLTGDVQVTLKE---GVGTLGE 201
Query: 204 VAFTDNSSWTRSRRFRIGVRAVAVAGSGDGGELRIREAVSESFMVKDHRGESYKKHFPPR 263
+ FTDNSSW R R+FR+G+R SG +R+REA +E+F VKDHRGE YKKH+PP
Sbjct: 202 LIFTDNSSWIRCRKFRLGLRV----SSGYCEGMRVREAKTEAFTVKDHRGELYKKHYPPA 257
Query: 264 PDDEVWRLKNIRKDGPIHKRLESERVRNVQGFLNLHATNPEKLRKLV--VMSDRLWKATL 321
DDEVWRL+ I KDG HK+L + NV+ FL L + +KLR ++ MS+R+W+
Sbjct: 258 LDDEVWRLEKIGKDGAFHKKLNKAGIYNVKEFLRLMVKDSQKLRTILGSGMSNRMWETLA 317
Query: 322 HHAKTCDFRAAEMMQV 337
H+KTC +EM+ V
Sbjct: 318 EHSKTCVL--SEMLYV 331
>AT5G57580.1 | chr5:23314994-23317683 REVERSE LENGTH=648
Length = 647
Score = 227 bits (579), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 131/314 (41%), Positives = 181/314 (57%), Gaps = 32/314 (10%)
Query: 28 PEAKRKRQTVPSFISVMRGAMAAEKIQKLGLDLEPFFRKAVQEELERSLSKHGHLLYRSP 87
PE KR P+F SV+ A+ + +QKL LEP R+ V EELER+L+K G P
Sbjct: 24 PERKR-----PAFASVIVEALKVDSLQKLCSSLEPILRRVVSEELERALAKLG------P 72
Query: 88 PMLVNSVDSS-----------LKLAFAKRLQLPIFTNNKLVDVDNNPLQVXXXXXXXXXX 136
L S SS L+L F RL LP+FT K+ + V
Sbjct: 73 ARLTGSSGSSPKRIEGPDGRKLQLHFKSRLSLPLFTGGKVEGEQGAVIHVVLIDANTGRA 132
Query: 137 XXXXXPMIKKLEVLVLDGDF-SHGDEGWSSDEFSGAIVREREGRRPLLVGTLNVAMADDH 195
KL ++VL+GDF + DE W+ +EF +V+ER G+RPLL G + V + +
Sbjct: 133 VVYGPEASAKLHIVVLEGDFNTEDDEDWTQEEFESHVVKERSGKRPLLTGEVYVTLKE-- 190
Query: 196 LGVAFIDDVAFTDNSSWTRSRRFRIGVRAVAVAGSGDGGELRIREAVSESFMVKDHRGES 255
GV + ++ FTDNSSW RSR+FR+G+R V+ G DG +RIREA +E+F+VKDHRGE
Sbjct: 191 -GVGTLGELVFTDNSSWIRSRKFRLGLRVVS--GCCDG--MRIREAKTEAFVVKDHRGEL 245
Query: 256 YKKHFPPRPDDEVWRLKNIRKDGPIHKRLESERVRNVQGFLNLHATNPEKLRKLV--VMS 313
YKKH+PP +D+VWRL I KDG HK+L +E + V+ FL + + KLR ++ MS
Sbjct: 246 YKKHYPPALNDDVWRLDKIGKDGAFHKKLTAEGINTVEDFLRVMVKDSPKLRTILGSGMS 305
Query: 314 DRLWKATLHHAKTC 327
+++W A + HAKTC
Sbjct: 306 NKMWDALVEHAKTC 319
>AT1G73805.1 | chr1:27745761-27749178 REVERSE LENGTH=452
Length = 451
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 134/305 (43%), Positives = 189/305 (61%), Gaps = 21/305 (6%)
Query: 31 KRKRQTVPSF---ISVMRGAMAAEKIQKLGLDLEPFFRKAVQEELERSLSKHGHLLYRSP 87
KR + +PS IS + GA+ +E L LEP RK V++E+E +SK L RS
Sbjct: 20 KRIKSVLPSLASPISSVFGALISE--NTLRSVLEPVIRKVVRQEVEYGISKRFRL-SRSS 76
Query: 88 PMLVNSVDSS---LKLAFAKRLQLPIFTNNKLVDVDNNPLQVXXXXXXXXXXXXXXXPMI 144
+ + +++ LKL F K L PIFT +K+ DVDNNPL++ P+
Sbjct: 77 SFRIEAPEATTPTLKLIFRKNLMTPIFTGSKISDVDNNPLEIILVDDSNKPVNLNR-PI- 134
Query: 145 KKLEVLVLDGDFSHGDEGWSSDEFSGAIVREREGRRPLLVGTLNVAMADDHLGVAFIDDV 204
KL+++ L GDF GD+ W+SDEF I++ER+G+RPLL G ++V + + GVA I ++
Sbjct: 135 -KLDIVALHGDFPSGDK-WTSDEFESNIIKERDGKRPLLAGEVSVTVRN---GVATIGEI 189
Query: 205 AFTDNSSWTRSRRFRIGVRAVAVAGSGDGGELRIREAVSESFMVKDHRGESYKKHFPPRP 264
FTDNSSW RSR+FRIG + VA SG G + + EA++E+ +V+DHRGE YKKH PP
Sbjct: 190 VFTDNSSWIRSRKFRIGAK-VAKGSSGQG--VVVCEAMTEAIVVRDHRGELYKKHHPPML 246
Query: 265 DDEVWRLKNIRKDGPIHKRLESERVRNVQGFLNLHATNPEKLRKLV--VMSDRLWKATLH 322
+DEVWRL+ I KDG HK+L S + VQ FL L + ++LR+++ MSDR W+ TL
Sbjct: 247 EDEVWRLEKIGKDGAFHKKLSSRHINTVQDFLKLSVVDVDELRQILGPGMSDRKWEVTLK 306
Query: 323 HAKTC 327
HA+ C
Sbjct: 307 HAREC 311
>AT2G24300.2 | chr2:10340913-10343457 FORWARD LENGTH=600
Length = 599
Score = 221 bits (562), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 129/307 (42%), Positives = 180/307 (58%), Gaps = 16/307 (5%)
Query: 28 PEAKRKRQTVPSFISVMRGAMAAEKIQKLGLDLEPFFRKAVQEELERSLSKHGH--LLYR 85
PE+KR Q VP+ SV+ A+ + +Q+L LEP FR+ V EE+ER+LS+ G+ L R
Sbjct: 17 PESKR--QKVPALASVIVEAVKVDSLQRLCSSLEPLFRRIVSEEVERALSRLGNAKLTSR 74
Query: 86 SP-PMLVNSVDS-SLKLAFAKRLQLPIFTNNKLVDVDNNPLQVXXXXXXXXXXXXXXXPM 143
SP P + + +L+L F R+ +FT K+ + + V
Sbjct: 75 SPEPKRIQDRNGRNLQLHFRTRMPPHLFTGGKVEGERGSAIHVVLIDANTGNVVQTGEES 134
Query: 144 IKKLEVLVLDGDFS-HGDEGWSSDEFSGAIVREREGRRPLLVGTLNVAMADDHLGVAFID 202
KL V+VL+GDF+ DE W+ + F V+EREG+RP+L G + + + GV +
Sbjct: 135 ASKLNVVVLEGDFNDEDDEDWTREHFESFEVKEREGKRPILTGDTQIVLKE---GVGTLG 191
Query: 203 DVAFTDNSSWTRSRRFRIGVRAVAVAGSGDGGELRIREAVSESFMVKDHRGESYKKHFPP 262
++ FTDNSSW RSR+FR+GV+ SG G IREA +E F VKDHRGE YKKH+PP
Sbjct: 192 ELTFTDNSSWIRSRKFRLGVKP----ASGYGDSFCIREAKTEPFAVKDHRGELYKKHYPP 247
Query: 263 RPDDEVWRLKNIRKDGPIHKRLESERVRNVQGFLNLHATNPEKLRKLV--VMSDRLWKAT 320
DEVWRL I KDG +HK+L + V+ FL L +P+KLR L+ MS+R+W+ T
Sbjct: 248 AVHDEVWRLDRIAKDGVLHKKLLKANIVTVEDFLRLLVKDPQKLRNLLGSGMSNRMWENT 307
Query: 321 LHHAKTC 327
+ HAKTC
Sbjct: 308 VEHAKTC 314
>AT4G25800.1 | chr4:13125224-13127765 FORWARD LENGTH=602
Length = 601
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 128/308 (41%), Positives = 177/308 (57%), Gaps = 20/308 (6%)
Query: 28 PEAKRKRQTVPSFISVMRGAMAAEKIQKLGLDLEPFFRKAVQEELERSLSKHGHLLYR-- 85
PE KR P+ SV+ A+ + +QKL LEP R+ V EE+ER+L+K
Sbjct: 13 PERKR-----PALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLVPTRLTTS 67
Query: 86 ---SPPMLVNSVDSSLKLAFAKRLQLPIFTNNKLVDVDNNPLQVXXXXXXXXXXXXXXXP 142
SP + +L+L F RL LP+FT ++ + V
Sbjct: 68 SVFSPKRIGGPDGRNLQLHFKSRLSLPLFTGGRVEGEQGATIHVVLIDANTGRPVTVGPE 127
Query: 143 MIKKLEVLVLDGDFSH-GDEGWSSDEFSGAIVREREGRRPLLVGTLNVAMADDHLGVAFI 201
KLEV+VL GDF++ DE W+ +EF +V+EREG+RPLL G L V + + GV +
Sbjct: 128 ASLKLEVVVLGGDFNNEDDEDWTQEEFESHVVKEREGKRPLLTGDLFVVLKE---GVGTL 184
Query: 202 DDVAFTDNSSWTRSRRFRIGVRAVAVAGSGDGGELRIREAVSESFMVKDHRGESYKKHFP 261
++ FTDNSSW RSR+FR+G+R + G DG +RIREA +E+F VKDHRGE YKKH+P
Sbjct: 185 GEIVFTDNSSWIRSRKFRLGLRVPS--GYCDG--IRIREAKTEAFSVKDHRGELYKKHYP 240
Query: 262 PRPDDEVWRLKNIRKDGPIHKRLESERVRNVQGFLNLHATNPEKLRKLV--VMSDRLWKA 319
P +DEVWRL+ I KDG HKRL + + V+GFL + KLR ++ MS+++W
Sbjct: 241 PALNDEVWRLEKIGKDGAFHKRLTAAGIVTVEGFLRQLVRDSTKLRAILGSGMSNKMWDL 300
Query: 320 TLHHAKTC 327
+ HAKTC
Sbjct: 301 LVEHAKTC 308
>AT4G31000.1 | chr4:15103402-15105799 FORWARD LENGTH=563
Length = 562
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/307 (39%), Positives = 175/307 (57%), Gaps = 20/307 (6%)
Query: 28 PEAKRKRQTVPSFISVMRGAMAAEKIQKLGLDLEPFFRKAVQEELERSLSK--HGHLLYR 85
PE+KR Q +P+ SV+ A+ + +Q+L LEP FR+ V EE+ER++S+ + R
Sbjct: 21 PESKR--QKLPALASVIVEAVKVDSLQRLCSSLEPLFRRIVSEEVERAISRLENSKSTSR 78
Query: 86 SP-PMLVNSVDS-SLKLAFAKRLQLPIFTNNKLVDVDNNPLQVXXXXXXXXXXXXXXXPM 143
S P + +D +L+L F R+ +FT K+ + + V
Sbjct: 79 STEPNKIQGLDGRNLQLRFRTRMPPHLFTGGKVEGEQGSAIHVVLIDANTGNVIQTGEES 138
Query: 144 IKKLEVLVLDGDFS-HGDEGWSSDEFSGAIVREREGRRPLLVGTLNVAMADDHLGVAFID 202
+ KL ++VLDGDF+ D+ W+ + F V+EREG+RP+L G +V + + GV +
Sbjct: 139 MTKLNIVVLDGDFNDEDDKDWTREHFESFEVKEREGKRPILTGDRHVIIKE---GVGTLG 195
Query: 203 DVAFTDNSSWTRSRRFRIGVRAVAVAGSGDGGELRIREAVSESFMVKDHRGESYKKHFPP 262
+ FTDNSSW RSR+FR+GV+ IREA +E F VKDHRGE YKKH+PP
Sbjct: 196 KLTFTDNSSWIRSRKFRLGVKPAT--------GFHIREAKTEPFAVKDHRGELYKKHYPP 247
Query: 263 RPDDEVWRLKNIRKDGPIHKRLESERVRNVQGFLNLHATNPEKLRKLV--VMSDRLWKAT 320
DEVWRL I KDG +HK+L + V+ FL + +P+KLR L+ MS+R+W T
Sbjct: 248 VLHDEVWRLDKIAKDGALHKKLLKSNIVTVEDFLQILMKDPQKLRSLLGSGMSNRMWDNT 307
Query: 321 LHHAKTC 327
+ HAKTC
Sbjct: 308 VEHAKTC 314
>AT5G62570.2 | chr5:25114934-25116967 FORWARD LENGTH=495
Length = 494
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 167/290 (57%), Gaps = 21/290 (7%)
Query: 60 LEPFFRKAVQEELERSLSKHGHLLYRSPPMLVNSVDS-SLKLAFAKRLQLPIFTNNKLVD 118
LEP RK V+EE+E +L KH + + ++S +L+L F L LP+FT+ ++
Sbjct: 32 LEPLIRKVVKEEVELALGKHLAGIKWICEKETHPLESRNLQLKFLNNLSLPVFTSARIEG 91
Query: 119 VDNNPLQVXXXXXXXXXXXXXXXPMIKKLEVLVLDGDFSHGDEGWSSDEFSGAIVREREG 178
+ ++V KLEV V++GDF+ + W+ ++ IVREREG
Sbjct: 92 DEGQAIRVGLIDPSTGQIFSSGPASSAKLEVFVVEGDFNSVSD-WTDEDIRNNIVREREG 150
Query: 179 RRPLLVGTLNVAMADDHLGVAFIDDVAFTDNSSWTRSRRFRIGVRAVAVAGSGDGGELRI 238
++PLL G + + D G+ +D+++FTDNSSWTRSR+FR+GVR V ++I
Sbjct: 151 KKPLLNGNVFAVLND---GIGVMDEISFTDNSSWTRSRKFRLGVRIV-----DQFDYVKI 202
Query: 239 REAVSESFMVKDHRGESYKKHFPPRPDDEVWRLKNIRKDGPIHKRLESERVRNVQGFLNL 298
REA++ESF+V+DHRGE YKKH PP DEVWRL+ I KDG H+RL + V+ FL
Sbjct: 203 REAITESFVVRDHRGELYKKHHPPSLFDEVWRLEKIGKDGAFHRRLNLSNINTVKDFLTH 262
Query: 299 HATNPEKLRKLV--VMSDRLWKATLHHAKTCDFRAAEMMQVKQSSIEAYQ 346
N KLR+++ MS ++W+ TL HA++C V SS+ YQ
Sbjct: 263 FHLNSSKLRQVLGTGMSSKMWEITLDHARSC---------VLDSSVHVYQ 303
>AT5G26920.1 | chr5:9475860-9478448 FORWARD LENGTH=564
Length = 563
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 156/296 (52%), Gaps = 22/296 (7%)
Query: 39 SFISVMRGAMAAEKIQKLGLDLEPFFRKAVQEELERSL----SKHGHLLYRSPPMLVNSV 94
+F V++ M + + + +E R+ V+EE++RSL S + RS +S
Sbjct: 24 TFKKVVKKVMRDQSNNQFMIQMENMIRRIVREEIQRSLQPFLSSSCVSMERSRSETPSS- 82
Query: 95 DSSLKLAFAKRLQLPIFTNNKLVDVDNNPLQVXXXXXXXXXXXXXXXPMIKKLEVLVLDG 154
S LKL F IFT +K+ D +PL + ++E++ L+
Sbjct: 83 RSRLKLCFINSPPSSIFTGSKIEAEDGSPLVIELVDATTNTLVSTGPFSSSRVELVPLNA 142
Query: 155 DFSHGDEGWSSDEFSGAIVREREGRRPLLVGTLNVAMADDHLGVAFID-DVAFTDNSSWT 213
DF+ +E W+ + F+ I+ +REG+RPLL G L V + + GV I D+AF+DNSSWT
Sbjct: 143 DFT--EESWTVEGFNRNILTQREGKRPLLTGDLTVMLKN---GVGVITGDIAFSDNSSWT 197
Query: 214 RSRRFRIGVRAVAVAGSGDGGELRIREAVSESFMVKDHRGESYKKHFPPRPDDEVWRLKN 273
RSR+FR+G + +GDG EA SE+F +D RGESYKKH PP P DEVWRL+
Sbjct: 198 RSRKFRLGAKL-----TGDGAV----EARSEAFGCRDQRGESYKKHHPPCPSDEVWRLEK 248
Query: 274 IRKDGPIHKRLESERVRNVQGFLNLHATNPEKLRKLV--VMSDRLWKATLHHAKTC 327
I KDG RL ++ V+ F L+ N +L ++ +S + W + HA C
Sbjct: 249 IAKDGVSATRLAERKILTVKDFRRLYTVNRNELHNIIGAGVSKKTWNTIVSHAMDC 304
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.132 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,180,698
Number of extensions: 370234
Number of successful extensions: 979
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 936
Number of HSP's successfully gapped: 8
Length of query: 436
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 334
Effective length of database: 8,310,137
Effective search space: 2775585758
Effective search space used: 2775585758
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)