BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0266400 Os09g0266400|AK065862
         (1095 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27325.2  | chr3:10095956-10102087 FORWARD LENGTH=1122        1124   0.0  

>AT3G27325.2 | chr3:10095956-10102087 FORWARD LENGTH=1122
          Length = 1121

 Score = 1124 bits (2908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 585/1101 (53%), Positives = 742/1101 (67%), Gaps = 46/1101 (4%)

Query: 9    RVAAVLVFTAWIALTALTRLLRPVPNGCVMTYMYPTYIPVSTPKNVSSDRYALFLYHEGW 68
            R+  VL+  AWI L AL  LL+P+ NGC MTYMYPTYIP+S   + +  RY L+LYHEGW
Sbjct: 51   RIVGVLILAAWIGLVALFGLLKPIKNGCTMTYMYPTYIPISVTDDTTPGRYGLYLYHEGW 110

Query: 69   KQIDFHHHLSNLNGVPVLFIPGNGGSYKQVRSLAAESFRAYQNGPLEPTFYREAST---A 125
            ++IDF  HL  L+GVPVLFIPGN GSYKQVRS+AAES RA+Q GP E TFY+EAS     
Sbjct: 111  RKIDFKEHLKKLSGVPVLFIPGNAGSYKQVRSVAAESDRAFQGGPFERTFYQEASLLRGG 170

Query: 126  FSVNELEGFSIPSRYGRMLDWFAVDLEGEHSAMDGRILEEHTEYVVYAIHRILDQYKESH 185
             +  E   + +PS+Y   LDWFAVDLEGEHSAMDGRILEEHTEYVVYAIHRILDQYKESH
Sbjct: 171  GADTESVDYDLPSQYSNRLDWFAVDLEGEHSAMDGRILEEHTEYVVYAIHRILDQYKESH 230

Query: 186  LARSKGRAQSSDNLPSSVILVGHSMGGFVARAALVHPGLRKSAVETILTLSSPHQYPPIA 245
              R +  A +S  LP  VILVGHSMGGFVARAA VHP LRKSAV+TILTLSSPHQ PP+A
Sbjct: 231  DTREREGAAASSKLPHDVILVGHSMGGFVARAAAVHPRLRKSAVQTILTLSSPHQSPPLA 290

Query: 246  LQPSLGQFFLHVNEEWRNGYKT----GLSRTSSAKLSNVVVVSVAGGIHDYQVRSKLALL 301
            LQPSLG +F  VN EW+ GY+     G +  S   LS VVVVS++GG +DYQVRSKL  L
Sbjct: 291  LQPSLGHYFAQVNREWKKGYEVQTSPGGNYVSDPLLSGVVVVSISGGYNDYQVRSKLESL 350

Query: 302  DGIVPSTHGFMVGSSSMKNVWLSMEHQSILWCNQLVVQVAHTLLSMVDPLNGQPFLSSQK 361
            DGIVPS+HGFM+ S+SM NVWLSMEHQ+ILWCNQLVVQV+HTLLSMVD    QPF  + K
Sbjct: 351  DGIVPSSHGFMISSTSMTNVWLSMEHQAILWCNQLVVQVSHTLLSMVDSKTNQPFSDTDK 410

Query: 362  RLFVFAKMLQSAVPQSLSWVAPVSGVKPPNLIASGNKEASDLQQKDSLSCPPSLQWTSDG 421
            RL+V  +MLQSA+ QS + + P+       ++AS              +C   L W  D 
Sbjct: 411  RLWVLTRMLQSALAQSFNGMTPMEVSHELPILASKGS-----------TC--FLDWRDDA 457

Query: 422  LEKDLHIQLNSVTVLAMDGKRRWLDIKKLGSNGKGHFVFVSNLSPCSGVRIHLWPEKDHS 481
            L++DL+IQ ++VT+LAMDG+RRWLDI  LGSNGK HF+FV+NL PCSGVR+HLWPEK+ S
Sbjct: 458  LDRDLYIQTSTVTILAMDGRRRWLDIDLLGSNGKNHFIFVTNLVPCSGVRLHLWPEKEKS 517

Query: 482  SEQNGVPASKKIVEVTSKMVQIPAGPAPKQVEPGSQTEQPPPTAFLLLSPEEMSGFRFMT 541
            +  + +P  ++++EVTSKMV IPAGPAPKQ EPGSQTEQ PP+A L L PE+M GFRF+T
Sbjct: 518  N--SNLPVCERVLEVTSKMVLIPAGPAPKQSEPGSQTEQAPPSAVLKLGPEDMRGFRFLT 575

Query: 542  ISVAPRPTISGRPPPAASMAVGQFFNPEEGTSALSAARIIGSSYIPEEIFLKEDHPLALN 601
            ISVAPR  +SG+PP A SMAVGQFFNP +G   +S+  ++ S+Y  +EIFLKEDHPLA N
Sbjct: 576  ISVAPREAVSGKPPVAVSMAVGQFFNPGDGAVEVSSQSMLLSTYWAKEIFLKEDHPLAYN 635

Query: 602  LSFSVSLGLLPVILSLRTAGCGVKA----TGDQLEAEKNKLCKLRCFPPVALAWDPVSGL 657
            LSFS SLGLLP  LSL+T GCG+K      G+  + +K+KLCKLRCFPPVALAWD  SGL
Sbjct: 636  LSFSTSLGLLPATLSLKTTGCGIKTFGLPDGETGDLDKDKLCKLRCFPPVALAWDSASGL 695

Query: 658  HIIPNIYSETLVVDSSPALWDSHQGTERSTVLVLADPHCSYEXXXXXXXXXXXXXXXXXX 717
            H+  N+YSET+V+DSSPALW S Q +E++TV++L DPHCSY                   
Sbjct: 696  HVFANLYSETIVIDSSPALWSS-QSSEKTTVMLLVDPHCSYTASVHVSAPAMSSRFVLLY 754

Query: 718  XXQILGFMIAVMFFGLMRQSSAWEHDSSVPSVLSAIESNLRLPRAFMFLCFIPVL--LFL 775
              QI+GF  AV+ F LMRQ++ W++  SVP +LSA+E NL +P  F+ L  +P++  LF 
Sbjct: 755  GPQIVGFSFAVIMFALMRQANQWDNKLSVPPLLSAVEYNLEMPSPFLLLAVLPLISSLFY 814

Query: 776  AFLVFTREQNPPLGTFLLVTMMCYIVANGFTXXXXXXXXXXXYVAAILHVFIKRRWQSWE 835
            +FL+   +  PPL +F +V+++CY++AN F              +A++H  +K R Q+ E
Sbjct: 815  SFLM--GQPIPPLTSFTVVSLICYLLANAFISVLTIVSKFPFQASALVHTTVKSRCQALE 872

Query: 836  DGTQSMIVRHFLTLSLPFQSLKIVQIIKNNPSIIVAFATIPLVCLVHPAIGLGVLLLSHA 895
                   +  F  LS  F  LK ++I+K N +I++    + LV  VHPA+GL VLL SHA
Sbjct: 873  RNYSLAFLHWFSILSSSFFCLKAIRILKLNTTILMTLIAVTLVSFVHPALGLFVLLASHA 932

Query: 896  FHAHSTLCSFLAASFR--SITQKKDLYKSMGDNIILPENKQDGLEQLLPMDDSPTSVKSF 953
               H+++C  + AS R  S+ QK +  +        P +++D +   L       S KSF
Sbjct: 933  LCCHNSMCCIMMASKRKESLDQKNEAERKTRH----PSSREDPVSGDL-------SEKSF 981

Query: 954  TDCQLEVFDCRHGIMILHLLATLMFAPSLVAWLQRIGMGQNFPWFVDSVLCVGTILHGLF 1013
             + Q ++F+ RHG++ILHLLA LMF PSL AW QRIG GQ+FPWF DS LCVG I HG+ 
Sbjct: 982  VETQADIFNHRHGLLILHLLAALMFVPSLAAWFQRIGTGQSFPWFADSALCVGVIFHGIL 1041

Query: 1014 GSPPNVSCISFKLPGRRGRDVGLSFLYLVAGYYSFVSSMXXXXXXXXXXXXIIGFICFAS 1073
             S P  S +    P   G  +    +YL+AGYY F S +             +G+I    
Sbjct: 1042 NSRPESSILR-SFPFFSGHQIRPHHIYLLAGYYCFFSGLELAPYKVFYAIASLGYISLTL 1100

Query: 1074 RIIE-TRSTVRGDVISRKHRK 1093
            +I +  ++ +R    SR HR 
Sbjct: 1101 KISQVNKNDLRFRTKSRIHRN 1121



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.136    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 23,931,807
Number of extensions: 1021904
Number of successful extensions: 2459
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 2449
Number of HSP's successfully gapped: 1
Length of query: 1095
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 986
Effective length of database: 8,118,225
Effective search space: 8004569850
Effective search space used: 8004569850
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 117 (49.7 bits)