BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0266000 Os09g0266000|AK061549
         (331 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G71480.1  | chr1:26932079-26933086 FORWARD LENGTH=217          202   2e-52
AT5G41470.1  | chr5:16593953-16595419 FORWARD LENGTH=278          112   2e-25
AT3G25270.1  | chr3:9203934-9204965 REVERSE LENGTH=344             63   2e-10
AT2G02650.1  | chr2:735411-736546 FORWARD LENGTH=366               49   5e-06

>AT1G71480.1 | chr1:26932079-26933086 FORWARD LENGTH=217
          Length = 216

 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 94/155 (60%), Positives = 122/155 (78%), Gaps = 3/155 (1%)

Query: 61  ETAARSAADVVRAFYDGVNRRDLAAVEPLIAEGCVYEDLVFPNPFVGRAEILGFFAGFMG 120
           ETA  SA++VV +FY  VN  DL++V  LIA+ CVYEDLVF +PFVGR  IL FF  F+ 
Sbjct: 65  ETAPTSASEVVSSFYAAVNVHDLSSVTDLIAQDCVYEDLVFSSPFVGRKAILDFFGKFIE 124

Query: 121 SVSSDLRFVIDDISAGDDSRAVGVTWHLDWKGRPFPFSRGCSFYRLQLDEKQQQLQIVYG 180
           S S+DL+FVIDDIS  +DS AVGV+WHL+WKG+ FPFS+GCSFYRL++ + ++  QIVYG
Sbjct: 125 STSTDLQFVIDDIST-EDSSAVGVSWHLEWKGKNFPFSKGCSFYRLEVIDGKR--QIVYG 181

Query: 181 RDCVEPAVKPGESALLIIRAVTWIFERFPRLANML 215
           RDCVEPA+KPGE+ L  I+ VTW+ ++FP+LA+  
Sbjct: 182 RDCVEPAIKPGETVLAAIKGVTWLLQKFPQLADQF 216



>AT5G41470.1 | chr5:16593953-16595419 FORWARD LENGTH=278
          Length = 277

 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 86/152 (56%), Gaps = 3/152 (1%)

Query: 66  SAADVVRAFYDGVNRRDLAAVEPLIAEGCVYEDLVFPNPFVGRAEILGFFAGFMGSVSSD 125
           S  D V  FY  +N ++   +   I+  C  +D  FP PF G+ E + FF   + S+  +
Sbjct: 74  SGYDAVMKFYSSINEKNQDQLSSCISSDCFIDDFSFPKPFRGKQEAMEFFEELVKSMGQN 133

Query: 126 LRFVIDDISAGDDSRAVGVTWHLDWKGRPFPFSRGCSFYRLQLDEKQQQLQIVYGRDCVE 185
           ++F ++++  GD   A  V WHL+WKGR  PF+RGCSFY   +DE   +L I   R  +E
Sbjct: 134 VKFCVENVCEGDGHSA-AVNWHLEWKGRKIPFTRGCSFYEF-IDE-GGRLVIRNARILIE 190

Query: 186 PAVKPGESALLIIRAVTWIFERFPRLANMLTK 217
             +KPG   L +++ +T++F+ FP+ A +  +
Sbjct: 191 SPIKPGGITLSLLKNITFLFDEFPKGAELFLE 222



>AT3G25270.1 | chr3:9203934-9204965 REVERSE LENGTH=344
          Length = 343

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 37/69 (53%)

Query: 217 KCVIGKIIWKSRAPARCKFFMYTAMRGACLTADNLQRRGWHLAPVCHLCSQDRETCAHIF 276
           K  I   IWK +   + K F++  + GA  T DNL+RR     P CH C Q+ ET  H+F
Sbjct: 11  KAEIKAKIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLF 70

Query: 277 LSCRYTQQV 285
             C Y QQV
Sbjct: 71  FDCFYAQQV 79



>AT2G02650.1 | chr2:735411-736546 FORWARD LENGTH=366
          Length = 365

 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 38/83 (45%)

Query: 220 IGKIIWKSRAPARCKFFMYTAMRGACLTADNLQRRGWHLAPVCHLCSQDRETCAHIFLSC 279
           + + IWK     + K F++  + GA  T   L+ R     P+C  C  + ET  HI  +C
Sbjct: 33  VKQAIWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNC 92

Query: 280 RYTQQVCATVRGRLGLSSTTPSA 302
            YTQ V  +    +G     PS+
Sbjct: 93  PYTQSVWRSANIIIGNQWGPPSS 115



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.326    0.137    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,274,888
Number of extensions: 251508
Number of successful extensions: 634
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 631
Number of HSP's successfully gapped: 4
Length of query: 331
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 232
Effective length of database: 8,392,385
Effective search space: 1947033320
Effective search space used: 1947033320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 112 (47.8 bits)