BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0258700 Os09g0258700|Os09g0258700
(375 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G62850.1 | chr5:25230204-25231527 REVERSE LENGTH=241 208 4e-54
AT3G28007.1 | chr3:10408243-10409633 REVERSE LENGTH=252 195 4e-50
AT4G10850.1 | chr4:6675068-6676718 FORWARD LENGTH=259 192 3e-49
AT1G66770.1 | chr1:24906451-24907236 REVERSE LENGTH=262 174 5e-44
AT5G40260.1 | chr5:16089842-16091527 FORWARD LENGTH=240 169 2e-42
AT1G21460.1 | chr1:7512030-7513281 REVERSE LENGTH=248 137 8e-33
AT5G13170.1 | chr5:4181331-4183171 REVERSE LENGTH=293 131 5e-31
AT5G23660.1 | chr5:7971936-7973796 REVERSE LENGTH=286 123 2e-28
AT5G53190.1 | chr5:21572417-21574284 REVERSE LENGTH=264 121 7e-28
AT3G14770.1 | chr3:4957787-4959202 REVERSE LENGTH=237 121 7e-28
AT5G50800.1 | chr5:20665280-20667140 REVERSE LENGTH=295 120 9e-28
AT4G25010.1 | chr4:12854630-12856351 REVERSE LENGTH=282 120 2e-27
AT4G15920.1 | chr4:9030742-9033343 REVERSE LENGTH=242 119 3e-27
AT3G16690.1 | chr3:5684563-5686425 REVERSE LENGTH=231 117 8e-27
AT5G50790.1 | chr5:20656461-20657827 REVERSE LENGTH=290 117 9e-27
AT3G48740.1 | chr3:18052814-18054663 REVERSE LENGTH=290 116 2e-26
AT2G39060.1 | chr2:16306818-16308206 REVERSE LENGTH=259 112 4e-25
>AT5G62850.1 | chr5:25230204-25231527 REVERSE LENGTH=241
Length = 240
Score = 208 bits (529), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 128/171 (74%)
Query: 1 MVSPDLIRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFY 60
M P R +VGIVGN+ISFGLF +P+PT +I K K V +FK DPY+AT+LNCM+W FY
Sbjct: 1 MTDPHTARTIVGIVGNVISFGLFCAPIPTMVKIWKMKSVSEFKPDPYVATVLNCMMWTFY 60
Query: 61 GLPIVHPNSILVVTINGIGLVIEAVYLTIFFLFSDKKNKKKMGVVLATEALFMAAVVLGV 120
GLP V P+S+LV+TING GL +E VY+TIFF+F+ ++K+ + + E +FMA V+
Sbjct: 61 GLPFVQPDSLLVITINGTGLFMELVYVTIFFVFATSPVRRKITIAMVIEVIFMAVVIFCT 120
Query: 121 LLGAHTHQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSV 171
+ HT ++RS+++GILC++F IMY++PLT+M V+KTKSV+YMP LS+
Sbjct: 121 MYFLHTTKQRSMLIGILCIVFNVIMYAAPLTVMKLVIKTKSVKYMPFFLSL 171
>AT3G28007.1 | chr3:10408243-10409633 REVERSE LENGTH=252
Length = 251
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 127/172 (73%)
Query: 1 MVSPDLIRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFY 60
MV+ + RN+ GI GN+IS LFLSP+PTF I K K V+++KADPYLAT+LNC LWVFY
Sbjct: 1 MVNATVARNIAGICGNVISLFLFLSPIPTFITIYKKKKVEEYKADPYLATVLNCALWVFY 60
Query: 61 GLPIVHPNSILVVTINGIGLVIEAVYLTIFFLFSDKKNKKKMGVVLATEALFMAAVVLGV 120
GLP+V P+S+LV+TING GL IE VYL IFF FS K K+G+ L E +F+ V
Sbjct: 61 GLPMVQPDSLLVITINGTGLAIELVYLAIFFFFSPTSRKVKVGLWLIGEMVFVGIVATCT 120
Query: 121 LLGAHTHQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSVE 172
LL HTH +RS VGI CVIF ++MY +PLTIMS+V+KTKSV+YMP LS+
Sbjct: 121 LLLFHTHNQRSSFVGIFCVIFVSLMYIAPLTIMSKVIKTKSVKYMPFSLSLA 172
>AT4G10850.1 | chr4:6675068-6676718 FORWARD LENGTH=259
Length = 258
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 126/170 (74%), Gaps = 1/170 (0%)
Query: 5 DLIRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGLPI 64
+L+R +VGI+GN I+ LFLSP PTF RI+K K V+++ PYLATL+NC++WV YGLP
Sbjct: 7 NLLRKIVGIIGNFIALCLFLSPTPTFVRIVKKKSVEEYSPIPYLATLINCLVWVLYGLPT 66
Query: 65 VHPNSILVVTINGIGLVIEAVYLTIFFLFSDK-KNKKKMGVVLATEALFMAAVVLGVLLG 123
VHP+S LV+TING G++IE V+LTIFF++ + K + + V+A E F+A + + VL
Sbjct: 67 VHPDSTLVITINGTGILIEIVFLTIFFVYCGRQKQRLIISAVIAAETAFIAILAVLVLTL 126
Query: 124 AHTHQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSVEA 173
HT ++R++ VGI+C +F +MY+SPL++M V+KTKSVE+MP LSV
Sbjct: 127 QHTTEKRTMSVGIVCCVFNVMMYASPLSVMKMVIKTKSVEFMPFWLSVAG 176
>AT1G66770.1 | chr1:24906451-24907236 REVERSE LENGTH=262
Length = 261
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 122/168 (72%), Gaps = 1/168 (0%)
Query: 5 DLIRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGLPI 64
+LIR +VGI+GN IS LFLSP PTF I+K K V+ + PYLATLLNC++ YGLP+
Sbjct: 7 NLIRKIVGILGNFISLCLFLSPTPTFIHIVKKKSVEKYSPLPYLATLLNCLVRALYGLPM 66
Query: 65 VHPNSILVVTINGIGLVIEAVYLTIFFLFSDKKNKK-KMGVVLATEALFMAAVVLGVLLG 123
VHP+S L+VTI+GIG+ IE V+LTIFF+F ++ + + VL + +F+A + + VL
Sbjct: 67 VHPDSTLLVTISGIGITIEIVFLTIFFVFCGRQQHRLVISAVLTVQVVFVATLAVLVLTL 126
Query: 124 AHTHQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSV 171
HT +R++ VGI+ +F +MY+SPL++M V+KTKS+E+MP LLSV
Sbjct: 127 EHTTDQRTISVGIVSCVFNAMMYASPLSVMKMVIKTKSLEFMPFLLSV 174
>AT5G40260.1 | chr5:16089842-16091527 FORWARD LENGTH=240
Length = 239
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 119/174 (68%), Gaps = 4/174 (2%)
Query: 1 MVSPDLIRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFY 60
MV +R ++G++GN+ISFGLF +P TF+RI K K V++F PY+AT++NCMLWVFY
Sbjct: 1 MVDAKQVRFIIGVIGNVISFGLFAAPAKTFWRIFKKKSVEEFSYVPYVATVMNCMLWVFY 60
Query: 61 GLPIVHPNSILVVTINGIGLVIEAVYLTIFFLFSD-KKNKKK--MGVVLATEALFMAAVV 117
GLP+VH +SILV TING+GLVIE Y+ ++ ++ KKN ++ +G LA E + + A++
Sbjct: 61 GLPVVHKDSILVSTINGVGLVIELFYVGVYLMYCGHKKNHRRNILG-FLALEVILVVAII 119
Query: 118 LGVLLGAHTHQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSV 171
L L + VG++C +F MY +P + +VVKTKSVEYMP LLS+
Sbjct: 120 LITLFALKGDFVKQTFVGVICDVFNIAMYGAPSLAIIKVVKTKSVEYMPFLLSL 173
>AT1G21460.1 | chr1:7512030-7513281 REVERSE LENGTH=248
Length = 247
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 102/168 (60%), Gaps = 3/168 (1%)
Query: 5 DLIRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGLPI 64
++ + G+ GN + LFL+P TF RIIKNK + F PY TLLNC+L +YGLP
Sbjct: 2 NIAHTIFGVFGNATALFLFLAPSITFKRIIKNKSTEQFSGIPYPMTLLNCLLSAWYGLPF 61
Query: 65 VHPNSILVVTINGIGLVIEAVYLTIFFLFSDKKNKKKM-GVVLATEALFMAAVVLGVLLG 123
V ++ LV TING G VIE VY+ IF ++ KK K K+ G+ A+F A V V L
Sbjct: 62 VSKDNTLVSTINGTGAVIETVYVLIFLFYAPKKEKIKIFGIFSCVLAVF--ATVALVSLF 119
Query: 124 AHTHQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSV 171
A R L G+ +F IMY+SPL+IM VVKTKSVE+MP LS+
Sbjct: 120 ALQGNGRKLFCGLAATVFSIIMYASPLSIMRLVVKTKSVEFMPFFLSL 167
>AT5G13170.1 | chr5:4181331-4183171 REVERSE LENGTH=293
Length = 292
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 109/171 (63%), Gaps = 3/171 (1%)
Query: 1 MVSPDLIRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFY 60
M++ + + GI+GN+ISF +FL+PVPTFYRI K K + F++ PY +L +CMLW++Y
Sbjct: 4 MINHHFLAFIFGILGNVISFLVFLAPVPTFYRIYKRKSTESFQSLPYQVSLFSCMLWLYY 63
Query: 61 GLPIVHPNSILVVTINGIGLVIEAVYLTIFFLFSDKKNK-KKMGVVLATEALFMAAVVLG 119
L + ++ L++TIN G V+E +Y+ +FF ++ ++ + M + +A F + +++
Sbjct: 64 AL--IKKDAFLLITINSFGCVVETLYIAMFFAYATREKRISAMKLFIAMNVAFFSLILMV 121
Query: 120 VLLGAHTHQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLS 170
T + ++G +CV ++++PL I+++V+KTKSVEYMP LS
Sbjct: 122 THFVVKTPPLQVSVLGWICVAISVSVFAAPLMIVARVIKTKSVEYMPFTLS 172
>AT5G23660.1 | chr5:7971936-7973796 REVERSE LENGTH=286
Length = 285
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 102/163 (62%), Gaps = 8/163 (4%)
Query: 12 GIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGLPIVHPNSIL 71
G++GN+ISF +FLSPVPTFYRI K K + F++ PY+ L + MLW++Y + L
Sbjct: 15 GLLGNLISFAVFLSPVPTFYRICKKKTTEGFQSIPYVVALFSAMLWLYYATQ--KKDVFL 72
Query: 72 VVTINGIGLVIEAVYLTIFFLFSDKKNKK---KMGVVLATEALFMAAVVLGVLLGAHTHQ 128
+VTIN G IE +Y++IF F+ KK + K+ ++L F ++L L T
Sbjct: 73 LVTINSFGCFIETIYISIFVAFASKKARMLTVKL-LLLMNFGGFCLILLLCQFLAKGT-- 129
Query: 129 RRSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSV 171
R+ I+G +CV F ++++PL+I+ V+KTKSVEYMP LS+
Sbjct: 130 TRAKIIGGICVGFSVCVFAAPLSIIRTVIKTKSVEYMPFSLSL 172
>AT5G53190.1 | chr5:21572417-21574284 REVERSE LENGTH=264
Length = 263
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
Query: 5 DLIRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGLPI 64
D +R +GI+GN S L+ +P+ TF R+ K K ++F PY+ TL NC+++ +YGLPI
Sbjct: 3 DKLRLSIGILGNGASLLLYTAPIVTFSRVFKKKSTEEFSCFPYVMTLFNCLIYTWYGLPI 62
Query: 65 VH--PNSILVVTINGIGLVIEAVYLTIFFLFSDKKNKKKMGVVLATEALFMAAVVLGVLL 122
V ++ +VTING+G+++E++++ I+F ++ K K K+GV + L
Sbjct: 63 VSHLWENLPLVTINGVGILLESIFIFIYFYYASPKEKIKVGVTFVPVIVGFGLTTAISAL 122
Query: 123 GAHTHQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLS 170
H+ R VG + ++ MY SPL +M +V++T+SVEYMP LS
Sbjct: 123 VFDDHRHRKSFVGSVGLVASISMYGSPLVVMKKVIETRSVEYMPFYLS 170
>AT3G14770.1 | chr3:4957787-4959202 REVERSE LENGTH=237
Length = 236
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Query: 3 SPDLIRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGL 62
S + +++ GI GNI +FGLF+SP+PTF RI++NK + F PY+ LLNC++ ++YG
Sbjct: 9 SLSMCKDVAGIAGNIFAFGLFVSPMPTFRRIMRNKSTEQFSGLPYIYALLNCLICLWYGT 68
Query: 63 PIVHPNSILVVTINGIGLVIEAVYLTIFFLFSDKKNKKKMGVVLATEALFMAAVVLGVLL 122
P + ++ +++T+N +G + Y+ +F + +DKKNK KM +L + +V G L
Sbjct: 69 PFISHSNAMLMTVNSVGATFQLCYIILFIMHTDKKNKMKMLGLLFVVFAVVGVIVAGS-L 127
Query: 123 GAHTHQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSVE 172
R VG L M++SPL +++ V++TKSVE+MP LS+
Sbjct: 128 QIPDQLTRWYFVGFLSCGSLVSMFASPLFVINLVIRTKSVEFMPFYLSLS 177
>AT5G50800.1 | chr5:20665280-20667140 REVERSE LENGTH=295
Length = 294
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 102/161 (63%), Gaps = 3/161 (1%)
Query: 12 GIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGLPIVHPNSIL 71
GI+GNIISF +FL+PVPTF RI K K + F++ PY++ L + MLW++Y + + L
Sbjct: 13 GILGNIISFVVFLAPVPTFVRICKKKSTEGFQSLPYVSALFSAMLWIYYAMQ-KDGTAFL 71
Query: 72 VVTINGIGLVIEAVYLTIFFLFSDKKNK-KKMGVVLATEALFMAAVVLGVLLGAHTHQRR 130
++TIN G VIE +Y+ +F +++KK + + V+ L AA+VL L R
Sbjct: 72 LITINAFGCVIETIYIVLFVSYANKKTRISTLKVLGLLNFLGFAAIVLVCELLTKGSTRE 131
Query: 131 SLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSV 171
++ GI CV F ++++PL+IM VV+T+SVE+MP LS+
Sbjct: 132 KVLGGI-CVGFSVSVFAAPLSIMRVVVRTRSVEFMPFSLSL 171
>AT4G25010.1 | chr4:12854630-12856351 REVERSE LENGTH=282
Length = 281
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 102/161 (63%), Gaps = 3/161 (1%)
Query: 12 GIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGLPIVHPNSIL 71
G++GNIISF +FL+PVPTF RI K K ++ F++ PY++ L + MLW++Y L L
Sbjct: 13 GVLGNIISFIVFLAPVPTFVRICKKKSIEGFESLPYVSALFSAMLWIYYALQ-KDGAGFL 71
Query: 72 VVTINGIGLVIEAVYLTIFFLFSDKKNK-KKMGVVLATEALFMAAVVLGVLLGAHTHQRR 130
++TIN +G IE +Y+ +F +++KK + + V+ L AA++L L R
Sbjct: 72 LITINAVGCFIETIYIILFITYANKKARISTLKVLGLLNFLGFAAIILVCELLTKGSNRE 131
Query: 131 SLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSV 171
++ GI CV F ++++PL+IM V++TKSVE+MP LS+
Sbjct: 132 KVLGGI-CVGFSVCVFAAPLSIMRVVIRTKSVEFMPFSLSL 171
>AT4G15920.1 | chr4:9030742-9033343 REVERSE LENGTH=242
Length = 241
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 95/161 (59%), Gaps = 3/161 (1%)
Query: 11 VGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGLPIVHPNSI 70
+G++GN+IS +FLSPV TF++I+K + +++K+ PY+ TLL LW +YG IV P
Sbjct: 8 IGVIGNVISVLVFLSPVETFWKIVKRRSTEEYKSLPYICTLLGSSLWTYYG--IVTPGEY 65
Query: 71 LVVTINGIGLVIEAVYLTIFFLFSDKKNK-KKMGVVLATEALFMAAVVLGVLLGAHTHQR 129
LV T+NG G ++E +Y+++F ++ + K K + V F A ++ +
Sbjct: 66 LVSTVNGFGALVETIYVSLFLFYAPRHLKLKTVDVEAMLNVFFPIAAIVATRSAFEDEKM 125
Query: 130 RSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLS 170
RS +G + IMY SPL+ M VV TKSV+YMP LS
Sbjct: 126 RSQSIGFISAGLNIIMYGSPLSAMKTVVTTKSVKYMPFWLS 166
>AT3G16690.1 | chr3:5684563-5686425 REVERSE LENGTH=231
Length = 230
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 95/161 (59%), Gaps = 3/161 (1%)
Query: 11 VGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGLPIVHPNSI 70
VG++GN+IS +FLSPV TF+RI++ + ++++ PY+ TL++ LW +YG IV P
Sbjct: 8 VGVIGNVISVLVFLSPVETFWRIVQRRSTEEYECFPYICTLMSSSLWTYYG--IVTPGEY 65
Query: 71 LVVTINGIGLVIEAVYLTIFFLFSDK-KNKKKMGVVLATEALFMAAVVLGVLLGAHTHQR 129
LV T+NG G + E++Y+ IF F K + K + VVLA F + G
Sbjct: 66 LVSTVNGFGALAESIYVLIFLFFVPKSRFLKTVVVVLALNVCFPVIAIAGTRTLFGDANS 125
Query: 130 RSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLS 170
RS +G +C IMY SPL+ + VV T+SV++MP LS
Sbjct: 126 RSSSMGFICATLNIIMYGSPLSAIKTVVTTRSVQFMPFWLS 166
>AT5G50790.1 | chr5:20656461-20657827 REVERSE LENGTH=290
Length = 289
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
Query: 2 VSPDLIRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYG 61
+S ++ + GI+GNIISF + L+P+PTF RI K K + +++ PY+ +L + MLW++Y
Sbjct: 3 ISQAVLATVFGILGNIISFFVCLAPIPTFVRIYKRKSSEGYQSIPYVISLFSAMLWMYYA 62
Query: 62 LPIVHPNSILVVTINGIGLVIEAVYLTIFFLFSDKKNKK-KMGVVLATEALFMAAVVLGV 120
+ + ++++++TIN V++ VY+++FF ++ KK K + VL + L A+ +
Sbjct: 63 M--IKKDAMMLITINSFAFVVQIVYISLFFFYAPKKEKTLTVKFVLFVDVLGFGAIFVLT 120
Query: 121 LLGAHTHQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLS 170
H ++R ++G +C++F ++ +PL I+ +V+KTKS E+MP LS
Sbjct: 121 YFIIHANKRVQ-VLGYICMVFALSVFVAPLGIIRKVIKTKSAEFMPFGLS 169
>AT3G48740.1 | chr3:18052814-18054663 REVERSE LENGTH=290
Length = 289
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 102/165 (61%), Gaps = 12/165 (7%)
Query: 12 GIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGLPIVHPNSIL 71
G++GN+ISF +FLSPVPTFYRI K K + F++ PY+ L + LW++Y + L
Sbjct: 15 GLLGNLISFAVFLSPVPTFYRIWKKKTTEGFQSIPYVVALFSATLWLYYATQ--KKDVFL 72
Query: 72 VVTINGIGLVIEAVYLTIFFLFSDKKNKK---KMGVVLATEALFMAAVVLGVLL--GAHT 126
+VTIN G IE +Y+++F ++ K + KM ++L F A ++L L GA
Sbjct: 73 LVTINAFGCFIETIYISMFLAYAPKPARMLTVKM-LLLMNFGGFCAILLLCQFLVKGA-- 129
Query: 127 HQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSV 171
R+ I+G +CV F ++++PL+I+ V+KT+SVEYMP LS+
Sbjct: 130 --TRAKIIGGICVGFSVCVFAAPLSIIRTVIKTRSVEYMPFSLSL 172
>AT2G39060.1 | chr2:16306818-16308206 REVERSE LENGTH=259
Length = 258
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 102/166 (61%), Gaps = 2/166 (1%)
Query: 7 IRNMVGIVGNIISFGLFLSPVPTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGLPIVH 66
I + G++GNI+SFG+FLSPVPTFY I K K + F++ PY+ L + L ++YG I+
Sbjct: 8 IAFLFGLLGNIVSFGVFLSPVPTFYGIYKKKSSKGFQSIPYICALASATLLLYYG--IMK 65
Query: 67 PNSILVVTINGIGLVIEAVYLTIFFLFSDKKNKKKMGVVLATEALFMAAVVLGVLLGAHT 126
++ L+++IN G IE YL ++ L++ ++ K ++ + +++ ++
Sbjct: 66 THAYLIISINTFGCFIEISYLFLYILYAPREAKISTLKLIVICNIGGLGLLILLVNLLVP 125
Query: 127 HQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSVE 172
Q R VG +C + +++SPL++M +V+KTKSVEYMP LLS+
Sbjct: 126 KQHRVSTVGWVCAAYSLAVFASPLSVMRKVIKTKSVEYMPFLLSLS 171
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.133 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,334,385
Number of extensions: 282217
Number of successful extensions: 961
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 929
Number of HSP's successfully gapped: 17
Length of query: 375
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 275
Effective length of database: 8,364,969
Effective search space: 2300366475
Effective search space used: 2300366475
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)