BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0255400 Os09g0255400|AK071383
         (381 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G48220.1  | chr5:19549930-19552046 FORWARD LENGTH=380          402   e-112
AT2G04400.1  | chr2:1531208-1533578 FORWARD LENGTH=403            394   e-110

>AT5G48220.1 | chr5:19549930-19552046 FORWARD LENGTH=380
          Length = 379

 Score =  402 bits (1033), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 186/275 (67%), Positives = 236/275 (85%), Gaps = 1/275 (0%)

Query: 106 VPRNMLEQIIWDKEVEVSQRKAKKPLQKVIESSQHAPPARDFVGALTAAYSRNVAPALIA 165
            PRN+LE+I+W K+ EV+Q K +KPL  + ++  + PPA+DF+GAL +A+ R   P LIA
Sbjct: 103 TPRNILEEIVWHKDKEVAQMKERKPLYSLKKALDNVPPAKDFIGALRSAHQRTGLPGLIA 162

Query: 166 EVKKASPSRGVLREDFNPVEIAQSYEKNGAACLSILTDEKHFQGSFENLETVRNSGVKCP 225
           EVKKASPSRG+LREDFNPVEIAQ+YEK GAACLS+LTD+K+F+GS+ENL+ +  +GVKCP
Sbjct: 163 EVKKASPSRGILREDFNPVEIAQAYEKGGAACLSVLTDDKYFKGSYENLQAIMEAGVKCP 222

Query: 226 LLCKEFVIDIWQIYYARSKGADAILLIAAVLPDLDIKYMLRICKNLGMTALIEVHDEREL 285
           LL KEF+++ WQIYY RSKGADA+LLIA+VLPDLDIKYM++ICK LGM  L+EVHDERE+
Sbjct: 223 LLLKEFIVEAWQIYYGRSKGADAVLLIASVLPDLDIKYMIKICKILGMATLVEVHDEREM 282

Query: 286 DRVLKIDGVQLIGINNRSLETFKVDTSNTKTLLE-KRGDLIRDKGILVVGESGLFTPDDV 344
           DRVL I+GV+LIGINNR+LETF+VD   TK LLE +RG+LIR K ILVVGESGLFTP+D+
Sbjct: 283 DRVLAIEGVELIGINNRNLETFEVDLGITKKLLEGERGELIRQKDILVVGESGLFTPEDI 342

Query: 345 AYVQNAGVSAILVGESLVKQENPGQAIAGLYGKDL 379
           A+VQ AGV A+LVGESL+KQ +PG+AI+ L+G+D+
Sbjct: 343 AFVQEAGVKAVLVGESLIKQSDPGKAISTLFGRDV 377



>AT2G04400.1 | chr2:1531208-1533578 FORWARD LENGTH=403
          Length = 402

 Score =  394 bits (1012), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 185/280 (66%), Positives = 234/280 (83%), Gaps = 1/280 (0%)

Query: 103 DKAVPRNMLEQIIWDKEVEVSQRKAKKPLQKVIESSQHAPPARDFVGALTAAYSRNVAPA 162
           D   PRN+LE+I W K+VEVS+ K   PL  + ++ + APP RDFVGAL  A+ R   P 
Sbjct: 122 DADSPRNILEEITWYKDVEVSRMKELNPLDVLKKAVEDAPPTRDFVGALRMAHKRTGFPG 181

Query: 163 LIAEVKKASPSRGVLREDFNPVEIAQSYEKNGAACLSILTDEKHFQGSFENLETVRNSGV 222
           LIAEVKKASPSRG+L+E+F+PVEIAQ+YEK GAACLS+LTD+K+FQG FENLE +R++GV
Sbjct: 182 LIAEVKKASPSRGILKENFDPVEIAQAYEKGGAACLSVLTDQKYFQGGFENLEAIRSAGV 241

Query: 223 KCPLLCKEFVIDIWQIYYARSKGADAILLIAAVLPDLDIKYMLRICKNLGMTALIEVHDE 282
           KCPLLCKEFV+D WQIYYAR+KGADA+LLIAAVL DL+I ++L+ICK L + AL+EVHDE
Sbjct: 242 KCPLLCKEFVVDPWQIYYARTKGADAVLLIAAVLADLEITFLLKICKKLSLAALVEVHDE 301

Query: 283 RELDRVLKIDGVQLIGINNRSLETFKVDTSNTKTLLE-KRGDLIRDKGILVVGESGLFTP 341
           RE+ RVL I+G++L+GINNRSLETF+VD SNTK LLE + G  IR++ ++VVGESGLFTP
Sbjct: 302 REMGRVLGIEGIELVGINNRSLETFEVDISNTKKLLEGEHGRQIRERDMIVVGESGLFTP 361

Query: 342 DDVAYVQNAGVSAILVGESLVKQENPGQAIAGLYGKDLLH 381
           DD+AYVQ AGV A+LVGES+VKQ +P + IAGL+G+++ H
Sbjct: 362 DDIAYVQAAGVKAVLVGESIVKQNDPEKGIAGLFGRNISH 401



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.316    0.134    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,679,181
Number of extensions: 262746
Number of successful extensions: 594
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 592
Number of HSP's successfully gapped: 2
Length of query: 381
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 281
Effective length of database: 8,364,969
Effective search space: 2350556289
Effective search space used: 2350556289
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)