BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0252700 Os09g0252700|AK101283
(1220 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55860.1 | chr1:20879900-20895393 REVERSE LENGTH=3931 1163 0.0
AT1G70320.1 | chr1:26488745-26501281 REVERSE LENGTH=3659 1150 0.0
>AT1G55860.1 | chr1:20879900-20895393 REVERSE LENGTH=3931
Length = 3930
Score = 1163 bits (3008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/1234 (51%), Positives = 834/1234 (67%), Gaps = 34/1234 (2%)
Query: 1 IRLSAFIVLVQASHDSESLALFLNNEPEFIDEXXXXXXYEDEIPEKIRRLGILSLVALCQ 60
IRL AF+VLVQAS D+E++ F N EPEF++E YED +PEKIR L +LSLVAL Q
Sbjct: 517 IRLYAFVVLVQASGDTENVVSFFNGEPEFVNELVTLVSYEDTVPEKIRILCLLSLVALSQ 576
Query: 61 DRSHQPTVLSSVTSGGHRGILPSLMQKAVDSIINGSTKWSTEFAEEXXXXXXXXXXXTPG 120
DR+ QPTVL++VTSGGHRG+L LMQKA+DS++ ++KWS FAE + G
Sbjct: 577 DRTRQPTVLTAVTSGGHRGLLSGLMQKAIDSVVCITSKWSLAFAEALLSLVTVLVSSSSG 636
Query: 121 SLALQEAGFIPTIXXXXXXXXXXXXXXVSTAVHVIEGFLDYHNPSSALFRDLGGLDDTIA 180
A++EAG IPT+ VS AVH++E F+DY NP++ALFRDLGGLDDTI
Sbjct: 637 CSAMREAGLIPTLVPLIKDTDPQHLHLVSAAVHILEAFMDYSNPAAALFRDLGGLDDTIF 696
Query: 181 RLKIEVSQVDIGSKKSEEPQSMSKGKEVESSLPPPDMQTVHSEALISYNRRNLMKALLRT 240
RLK+EVS+ + K + S S G + E Q +SEALISY+RR L+KALLR
Sbjct: 697 RLKLEVSRTE-DDVKEKNCSSDSNGPDTE--------QLPYSEALISYHRRLLLKALLRA 747
Query: 241 ISLATYVPGSSARVDGSEENVLPPCLCTIFRRAKEFGGGVFSLAATVMSDLIHKDPTCFT 300
ISL TY PG++ + GSEE++LP CLC IFRRAK+FGGGVFSLAATVMSDLIHKDPTCF
Sbjct: 748 ISLGTYAPGNT-NLYGSEESLLPECLCIIFRRAKDFGGGVFSLAATVMSDLIHKDPTCFN 806
Query: 301 VLDAAGLPQAFIDAIMGGILYNSDAITCIPQCLDALCLNSSGLQLVKDHNALRCFVKIFT 360
LD+AGL F+DAI ++ +++AITCIPQCLDALCLN+SGLQ VKD NALRCFVKIFT
Sbjct: 807 ALDSAGLTSTFLDAISDEVICSAEAITCIPQCLDALCLNNSGLQAVKDRNALRCFVKIFT 866
Query: 361 SRSYLKALGGDTAGALSLGLDELLRHQSSLRSSGVDMLIEILNTISKVXXXXXXXXXXXX 420
S SYL+AL GDT G+LS GLDELLRHQSSLR+ GVDM IEILN++ +
Sbjct: 867 SPSYLRALTGDTPGSLSSGLDELLRHQSSLRTYGVDMFIEILNSMLIIGSGMEATTSKSA 926
Query: 421 X--XXXXPLPMETDVQGGTXXXXXXXXXXXXXXKMVDASLDATSSSIESYLPECICNVGR 478
P+PME DV + + S D + ++IE +LP+C+CNV R
Sbjct: 927 DVPTSAAPVPMEIDVDEKSLAVSDE----------AEPSSDTSPANIELFLPDCVCNVAR 976
Query: 479 LIETILQNSDTCRLFSEKKGIEAVLQLFKLPLMPVSVSVGQSISVAFKNFSSQHSVSLAR 538
L ET+LQN++ C LF EKKGI+AVLQLF LPLMP+S S+GQS SVAFKNFS QHS LAR
Sbjct: 977 LFETVLQNAEVCSLFVEKKGIDAVLQLFSLPLMPLSTSLGQSFSVAFKNFSPQHSAGLAR 1036
Query: 539 AVCSFCRDHLKLTNGLLGSVSGTKLVISDHVKQSPXXXXXXXXXXXXXXCNFLLKGNAFM 598
VCS+ R+HLK T LL S+ GT+L+ + Q+ NFLLKG+A +
Sbjct: 1037 IVCSYLREHLKKTKILLVSIEGTQLLKLESAIQTKILRSLSCLEGMLSLSNFLLKGSASV 1096
Query: 599 VSELAFADAEILRELGKVYIEVTWQISLLSDSKV-EKQDMEQDDVPGDASVSNLSERDSD 657
+SEL+ ADA++L+ELG Y + WQ++L +D+K EK+ +++ ++ S+ +ER+SD
Sbjct: 1097 ISELSAADADVLKELGITYKQTIWQMALCNDTKEDEKKSVDRGSDNSVSASSSTAERESD 1156
Query: 658 DDTNAASVTRHMNPV-SVRTSSVSPWNMEQDIISAVRSAASIHRHGRHTLSRIR-GRLSG 715
+D++ A R+ NPV +SS S W +++ +S VRS IH RH ++R+R GR
Sbjct: 1157 EDSSNALAVRYTNPVSIRSSSSQSIWGGDREFLSIVRSGEGIHGRTRHAIARMRGGRTRR 1216
Query: 716 AMDAAHTDIDSPFSPGESSQSHDTIKKSPDVVVSELLTKLGHTMRSFLSTLVKGLPA--R 773
+++ + D + P +S SH+ KKS +V+++E+L KL T+R F + LVKG + R
Sbjct: 1217 HLESFNFDSEIPADLPVTSSSHELKKKSTEVLIAEILNKLNCTLRFFFTALVKGFTSANR 1276
Query: 774 RRAD-SSLTPASRSLVIALAQLFLTALGYSGH-STAGFEMSLSVKCRYLGKVVEDMAALT 831
RR D +SL+ AS++L ALA++FL AL + G+ + AG E SLSVKCRYLGKVV+D+ L+
Sbjct: 1277 RRIDGASLSSASKTLGTALAKVFLEALNFDGYGAAAGHEKSLSVKCRYLGKVVDDITFLS 1336
Query: 832 FDSRRRSCNSAIVNSFYVNGTFKELLTTFEATSQLLWTLPFSVPTTGSDQASSISEKV-S 890
FD+RRR C +A+VNSFYV+GTFKELLTTFEATSQLLWT+PFS+P + ++ + S
Sbjct: 1337 FDTRRRVCFTAMVNSFYVHGTFKELLTTFEATSQLLWTVPFSIPASSTENEKPGERNIWS 1396
Query: 891 HNSWLLDTLQSYCKLLEYCVNSSFLLSP-SHNQLLVQPMVTELSINLFPVPSEPESFVRI 949
H+ WL+DTLQ+YC+ L+Y VNS++LLSP S QLLVQP LSI LFPVP EPE+FVR
Sbjct: 1397 HSKWLVDTLQNYCRALDYFVNSTYLLSPTSQTQLLVQPASVGLSIGLFPVPREPETFVRN 1456
Query: 950 LQSQVLEAVLPVWNHTMFPECSPSLITSLISIVSHICSGVGALKQSRAGVGAA-NQRLTS 1008
LQSQVL+ +LP+WNH MFP+C+P+ + S+ S+V+HI SGV +++R+GV NQR
Sbjct: 1457 LQSQVLDVILPIWNHPMFPDCNPNFVASVTSLVTHIYSGVVDARENRSGVTRGINQRALP 1516
Query: 1009 PPLDESSIATIVEMGFSRARAEEALRSVRTNSVEMATDWLFSHPEEFVQEDVQLAQALAL 1068
LDES + IVEMGFSR+RAE ALR V TNSVEMA DWLF++PE+ VQED +LAQALAL
Sbjct: 1517 LQLDESIVGMIVEMGFSRSRAEIALRRVGTNSVEMAMDWLFTNPEQPVQEDDELAQALAL 1576
Query: 1069 SLGNTTEASKEDGCNKNGPSVVEDKGVILLPLDDILAVSTKLFSSGDDMAFPLTDLLVTL 1128
SLGN++E K + K E+ P+D+++A S KLF S D MAFPL DL VTL
Sbjct: 1577 SLGNSSETPKLEDTEKPVDVPQEEAEPKEPPVDEVIAASVKLFQSDDSMAFPLMDLFVTL 1636
Query: 1129 CNQNKGDDRQPVILYLFEQLKRFPSDSSVDAGXXXXXXXXXXXXXXXXXXIREIGAENGV 1188
CN+NKG+DR ++ YL +QLK D S D G REI A++G+
Sbjct: 1637 CNRNKGEDRPKIVSYLIQQLKLVQLDFSKDTGALTMIPHILALVLSEDDNTREIAAQDGI 1696
Query: 1189 VPHVLNLLE--NLKSRTEKTDQTWNSISALLLIL 1220
V + +L NLKS +E ISALLL+L
Sbjct: 1697 VTVAIGILTDFNLKSESETEILAPKCISALLLVL 1730
>AT1G70320.1 | chr1:26488745-26501281 REVERSE LENGTH=3659
Length = 3658
Score = 1150 bits (2974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/1234 (51%), Positives = 832/1234 (67%), Gaps = 32/1234 (2%)
Query: 1 IRLSAFIVLVQASHDSESLALFLNNEPEFIDEXXXXXXYEDEIPEKIRRLGILSLVALCQ 60
IRL AFIVLVQAS D+E++ F N EPEF++E YED +P KIR L + SLVAL Q
Sbjct: 268 IRLYAFIVLVQASGDTENVVSFFNGEPEFVNELVTLVSYEDTVPAKIRILCLQSLVALSQ 327
Query: 61 DRSHQPTVLSSVTSGGHRGILPSLMQKAVDSIINGSTKWSTEFAEEXXXXXXXXXXXTPG 120
DR+ QPTVL++VTSGGHRG+L LMQKA+DS+I ++KWS FAE + G
Sbjct: 328 DRTRQPTVLTAVTSGGHRGLLSGLMQKAIDSVICNTSKWSLAFAEALLSLVTVLVSSSSG 387
Query: 121 SLALQEAGFIPTIXXXXXXXXXXXXXXVSTAVHVIEGFLDYHNPSSALFRDLGGLDDTIA 180
A++EAG IPT+ VSTAVH++E F+DY NP++ALFRDLGGLDDTI
Sbjct: 388 CSAMREAGLIPTLVPLIKDTDPQHLHLVSTAVHILEVFMDYSNPAAALFRDLGGLDDTIF 447
Query: 181 RLKIEVSQVDIGSKKSEEPQSMSKGKEVESSLPPPDMQTVHSEALISYNRRNLMKALLRT 240
RLK EVS+ + K+ S S G E ++ P +SEALISY+RR L+KALLR
Sbjct: 448 RLKQEVSRTEDDVKEIV-CCSGSNGPEDDTEQLP------YSEALISYHRRLLLKALLRA 500
Query: 241 ISLATYVPGSSARVDGSEENVLPPCLCTIFRRAKEFGGGVFSLAATVMSDLIHKDPTCFT 300
ISL TY PG++ + GSEE++LP CLC IFRRAK+FGGGVFSLAATVMSDLIHKDPTCF
Sbjct: 501 ISLGTYAPGNT-NLYGSEESLLPECLCIIFRRAKDFGGGVFSLAATVMSDLIHKDPTCFN 559
Query: 301 VLDAAGLPQAFIDAIMGGILYNSDAITCIPQCLDALCLNSSGLQLVKDHNALRCFVKIFT 360
LD+AGL AF+DAI ++ +++AITCIPQCLDALCLN+SGLQ VKD NALRCFVKIF+
Sbjct: 560 ALDSAGLTSAFLDAISDEVICSAEAITCIPQCLDALCLNNSGLQAVKDRNALRCFVKIFS 619
Query: 361 SRSYLKALGGDTAGALSLGLDELLRHQSSLRSSGVDMLIEILNTISKVXXXXXXXXXXXX 420
S SYLKAL DT G+LS GLDELLRHQSSLR+ GVDM IEILN+I +
Sbjct: 620 SPSYLKALTSDTPGSLSSGLDELLRHQSSLRTYGVDMFIEILNSILIIGSGMEATTSKSA 679
Query: 421 X--XXXXPLPMETDVQGGTXXXXXXXXXXXXXXKMVDASLDATSSSIESYLPECICNVGR 478
P+PME DV + + S D + ++IE +LP+C+CNV R
Sbjct: 680 DVPTDAAPVPMEIDVDEKSLAVSDE----------AEPSSDTSPANIELFLPDCVCNVAR 729
Query: 479 LIETILQNSDTCRLFSEKKGIEAVLQLFKLPLMPVSVSVGQSISVAFKNFSSQHSVSLAR 538
L ET+LQN++ C LF EKKGI+ VLQLF LPLMP+S S+GQS SVAFKNFS QHS LAR
Sbjct: 730 LFETVLQNAEVCSLFVEKKGIDTVLQLFSLPLMPLSTSLGQSFSVAFKNFSPQHSAGLAR 789
Query: 539 AVCSFCRDHLKLTNGLLGSVSGTKLVISDHVKQSPXXXXXXXXXXXXXXCNFLLKGNAFM 598
+CS+ R+HLK TN LL S+ GT+L+ + Q+ NFLLKG+A +
Sbjct: 790 ILCSYLREHLKKTNNLLVSIEGTQLLKLESAVQTKILRSLSCLEGMLSLSNFLLKGSASV 849
Query: 599 VSELAFADAEILRELGKVYIEVTWQISLLSDSKV-EKQDMEQDDVPGDASVSNLSERDSD 657
+SEL+ A+A++L+ELG Y + WQ++L +D+K EK+ +++ ++ S+ +ER+SD
Sbjct: 850 ISELSAANADVLKELGITYKQTIWQMALCNDTKEDEKKSVDRASDNSVSASSSTAERESD 909
Query: 658 DDTNAASVTRHMNPV-SVRTSSVSPWNMEQDIISAVRSAASIHRHGRHTLSRIR-GRLSG 715
+D++ A R+ NPV +SS S W ++ +S VRS +H H RH ++R+R GR
Sbjct: 910 EDSSNALAVRYTNPVSIRSSSSQSIWGGHREFLSVVRSGRGVHGHTRHAIARMRGGRTRR 969
Query: 716 AMDAAHTDIDSPFSPGESSQSHDTIKKSPDVVVSELLTKLGHTMRSFLSTLVKGLPA--R 773
+++ + D + P +S SH+ KKS +V+++E+L KL T+R F ++LVKG + R
Sbjct: 970 HLESFNFDSEIPADLPVTSSSHELKKKSTEVLIAEILNKLNCTLRFFFTSLVKGFTSANR 1029
Query: 774 RRADS-SLTPASRSLVIALAQLFLTALGYSGH-STAGFEMSLSVKCRYLGKVVEDMAALT 831
RR D SL+ AS++L ALA++FL AL + G+ + AG + SLS+KCRYLGKVV+D+ LT
Sbjct: 1030 RRIDGPSLSSASKTLGTALAKVFLEALNFQGYGAAAGPDTSLSLKCRYLGKVVDDITFLT 1089
Query: 832 FDSRRRSCNSAIVNSFYVNGTFKELLTTFEATSQLLWTLPFSVPTTGSDQASSISEKV-S 890
FD+RRR C +A+VNSFYV+GTFKELLTTFEATSQLLW +PFS+ + ++ S + S
Sbjct: 1090 FDTRRRVCFTAMVNSFYVHGTFKELLTTFEATSQLLWKVPFSIRASSTENEKSGERNLWS 1149
Query: 891 HNSWLLDTLQSYCKLLEYCVNSSFLLSP-SHNQLLVQPMVTELSINLFPVPSEPESFVRI 949
H+ WL+DTLQ+YC+ L+Y VNS++LLSP S QLLVQP +LSI LFPVP EPE+FVR
Sbjct: 1150 HSKWLVDTLQNYCRALDYFVNSTYLLSPTSQTQLLVQPASVDLSIGLFPVPREPETFVRN 1209
Query: 950 LQSQVLEAVLPVWNHTMFPECSPSLITSLISIVSHICSGVGALKQSRAG-VGAANQRLTS 1008
LQSQVLE +LP+WNH MFP+C+P+ + S+ S+V+HI SGV +++R+G NQR
Sbjct: 1210 LQSQVLEVILPIWNHPMFPDCNPNFVASVTSLVTHIYSGVVDTRENRSGATQGTNQRALP 1269
Query: 1009 PPLDESSIATIVEMGFSRARAEEALRSVRTNSVEMATDWLFSHPEEFVQEDVQLAQALAL 1068
DE+ + IVEMGFSR+RAE+ALR V TNSVEMA DWLF++PE+ VQED +LAQALAL
Sbjct: 1270 LQPDEAIVGMIVEMGFSRSRAEDALRRVGTNSVEMAMDWLFTNPEDPVQEDDELAQALAL 1329
Query: 1069 SLGNTTEASKEDGCNKNGPSVVEDKGVILLPLDDILAVSTKLFSSGDDMAFPLTDLLVTL 1128
SLGN++E K + K E+ P+D+++A S KLF S D +AFPL DL VTL
Sbjct: 1330 SLGNSSETPKLEDTEKPVDVPQEEAEPKEPPVDEVIAASVKLFQSDDSIAFPLVDLFVTL 1389
Query: 1129 CNQNKGDDRQPVILYLFEQLKRFPSDSSVDAGXXXXXXXXXXXXXXXXXXIREIGAENGV 1188
CN+NKG+DR ++ YL +QLK D S D G REI A++G+
Sbjct: 1390 CNRNKGEDRPKIVFYLIQQLKLVQLDFSKDTGALTMIPHILALVLSEDDNTREIAAQDGI 1449
Query: 1189 VPHVLNLLE--NLKSRTEKTDQTWNSISALLLIL 1220
V + +L NLKS +E ISALLL+L
Sbjct: 1450 VAVAIGILTDFNLKSESETDILAPKCISALLLVL 1483
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.131 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 22,906,629
Number of extensions: 877101
Number of successful extensions: 2739
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2707
Number of HSP's successfully gapped: 2
Length of query: 1220
Length of database: 11,106,569
Length adjustment: 110
Effective length of query: 1110
Effective length of database: 8,090,809
Effective search space: 8980797990
Effective search space used: 8980797990
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 117 (49.7 bits)