BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0249700 Os09g0249700|AK069757
(587 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G25800.1 | chr3:9422822-9425783 REVERSE LENGTH=588 1087 0.0
AT1G13320.1 | chr1:4563692-4567348 REVERSE LENGTH=588 1064 0.0
AT1G25490.1 | chr1:8951700-8954899 FORWARD LENGTH=589 1036 0.0
>AT3G25800.1 | chr3:9422822-9425783 REVERSE LENGTH=588
Length = 587
Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/587 (88%), Positives = 566/587 (96%)
Query: 1 MASMDEPLYPIAILIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE 60
M+ +DEPLYPIA+LIDELKN+DIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDD+
Sbjct: 1 MSMIDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD 60
Query: 61 DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKES 120
DEVLLAMAEELGVFIPYVGGVE+AHVLLPPLETL TVEETCVR+KAVESLCR+G+QM+ES
Sbjct: 61 DEVLLAMAEELGVFIPYVGGVEYAHVLLPPLETLSTVEETCVREKAVESLCRVGSQMRES 120
Query: 121 DIVDWFVPVVKRLAAGEWFTARVSSCGLFHIAYPSAPDQLKAELRTIYGQLCQDDMPMVR 180
D+VD F+ +VKRLAAGEWFTARVS+CG+FHIAYPSAPD LK ELR++Y QLCQDDMPMVR
Sbjct: 121 DLVDHFISLVKRLAAGEWFTARVSACGVFHIAYPSAPDMLKTELRSLYTQLCQDDMPMVR 180
Query: 181 RAAASNLGKFAATVEQNYLKTEVMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA 240
RAAA+NLGKFAATVE +LKT+VMS+F+DLTQDDQDSVRLLAVEGCAALGKLLEPQDCV
Sbjct: 181 RAAATNLGKFAATVESAHLKTDVMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVQ 240
Query: 241 HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEHSREQLVPAYVRLLRDNEAEVRIAA 300
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPE +R +LVPAYVRLLRDNEAEVRIAA
Sbjct: 241 HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAA 300
Query: 301 AGKVTKFCRILSPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLL 360
AGKVTKFCRIL+P++AIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGK+ATIE LL
Sbjct: 301 AGKVTKFCRILNPEIAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLL 360
Query: 361 PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY 420
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
Sbjct: 361 PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY 420
Query: 421 IPLLASQLGVGFFDDKLGALCMQWLEDKVFSIRDAAANNLKRLAEEFGPEWAMQHIIPQV 480
IPLLASQLGVGFFDDKLGALCMQWL+DKV SIRDAAANNLKRLAEEFGPEWAMQHI+PQV
Sbjct: 421 IPLLASQLGVGFFDDKLGALCMQWLQDKVHSIRDAAANNLKRLAEEFGPEWAMQHIVPQV 480
Query: 481 LEKINNPHYLYRMTILQAISLLAPVMGAEITCQQLLPVVINSSKDRVPNIKFNVAKVLQA 540
LE +NNPHYLYRMTIL+A+SLLAPVMG+EITC +LLPVV+ +SKDRVPNIKFNVAKVLQ+
Sbjct: 481 LEMVNNPHYLYRMTILRAVSLLAPVMGSEITCSKLLPVVMTASKDRVPNIKFNVAKVLQS 540
Query: 541 LIPILDQSVVEKNVKPCLVELSEDPDVDVRYYANQALQACDQIMMSS 587
LIPI+DQSVVEK ++P LVELSEDPDVDVR++ANQALQ+ D +MMSS
Sbjct: 541 LIPIVDQSVVEKTIRPGLVELSEDPDVDVRFFANQALQSIDNVMMSS 587
>AT1G13320.1 | chr1:4563692-4567348 REVERSE LENGTH=588
Length = 587
Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/587 (87%), Positives = 559/587 (95%)
Query: 1 MASMDEPLYPIAILIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE 60
M+ +DEPLYPIA+LIDELKN+DIQ RLNSI+RLS IARALGEERTRKELIPFLSENNDD+
Sbjct: 1 MSMVDEPLYPIAVLIDELKNDDIQRRLNSIKRLSIIARALGEERTRKELIPFLSENNDDD 60
Query: 61 DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKES 120
DEVLLAMAEELG FI YVGGVE+A+VLLPPLETL TVEETCVR+KAV+SLCRIGAQM+ES
Sbjct: 61 DEVLLAMAEELGGFILYVGGVEYAYVLLPPLETLSTVEETCVREKAVDSLCRIGAQMRES 120
Query: 121 DIVDWFVPVVKRLAAGEWFTARVSSCGLFHIAYPSAPDQLKAELRTIYGQLCQDDMPMVR 180
D+V+ F P+ KRL+AGEWFTARVS+CG+FHIAYPSAPD LK ELR+IYGQLCQDDMPMVR
Sbjct: 121 DLVEHFTPLAKRLSAGEWFTARVSACGIFHIAYPSAPDVLKTELRSIYGQLCQDDMPMVR 180
Query: 181 RAAASNLGKFAATVEQNYLKTEVMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA 240
RAAA+NLGKFAAT+E +LKT++MS+F+DLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
Sbjct: 181 RAAATNLGKFAATIESAHLKTDIMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA 240
Query: 241 HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEHSREQLVPAYVRLLRDNEAEVRIAA 300
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPE +R LVPAY RLL DNEAEVRIAA
Sbjct: 241 HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYARLLCDNEAEVRIAA 300
Query: 301 AGKVTKFCRILSPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLL 360
AGKVTKFCRIL+P+LAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGK+ATIE LL
Sbjct: 301 AGKVTKFCRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLL 360
Query: 361 PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY 420
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
Sbjct: 361 PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY 420
Query: 421 IPLLASQLGVGFFDDKLGALCMQWLEDKVFSIRDAAANNLKRLAEEFGPEWAMQHIIPQV 480
IPLLASQLGVGFFD+KLGALCMQWL+DKV SIR+AAANNLKRLAEEFGPEWAMQHI+PQV
Sbjct: 421 IPLLASQLGVGFFDEKLGALCMQWLQDKVHSIREAAANNLKRLAEEFGPEWAMQHIVPQV 480
Query: 481 LEKINNPHYLYRMTILQAISLLAPVMGAEITCQQLLPVVINSSKDRVPNIKFNVAKVLQA 540
LE INNPHYLYRMTIL+A+SLLAPVMG+EITC +LLP VI +SKDRVPNIKFNVAK++Q+
Sbjct: 481 LEMINNPHYLYRMTILRAVSLLAPVMGSEITCSKLLPAVITASKDRVPNIKFNVAKMMQS 540
Query: 541 LIPILDQSVVEKNVKPCLVELSEDPDVDVRYYANQALQACDQIMMSS 587
LIPI+DQ+VVE ++PCLVELSEDPDVDVRY+ANQALQ+ D +MMSS
Sbjct: 541 LIPIVDQAVVENMIRPCLVELSEDPDVDVRYFANQALQSIDNVMMSS 587
>AT1G25490.1 | chr1:8951700-8954899 FORWARD LENGTH=589
Length = 588
Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/581 (84%), Positives = 548/581 (94%)
Query: 1 MASMDEPLYPIAILIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE 60
MA +DEPLYPIA+LIDELKN+DIQLRLNSIRRLSTIARALGEERTRKELIPFLSEN+DD+
Sbjct: 1 MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENSDDD 60
Query: 61 DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKES 120
DEVLLAMAEELGVFIP+VGG+E AHVLLPPLE+LCTVEETCVR+KAVESLC+IG+QMKE+
Sbjct: 61 DEVLLAMAEELGVFIPFVGGIEFAHVLLPPLESLCTVEETCVREKAVESLCKIGSQMKEN 120
Query: 121 DIVDWFVPVVKRLAAGEWFTARVSSCGLFHIAYPSAPDQLKAELRTIYGQLCQDDMPMVR 180
D+V+ FVP+VKRLA GEWF ARVS+CG+FH+AY D LK ELR Y QLC+DDMPMVR
Sbjct: 121 DLVESFVPLVKRLAGGEWFAARVSACGIFHVAYQGCTDVLKTELRATYSQLCKDDMPMVR 180
Query: 181 RAAASNLGKFAATVEQNYLKTEVMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA 240
RAAASNLGKFA TVE +L E+M++FDDLT+DDQDSVRLLAVEGCAALGKLLEPQDCVA
Sbjct: 181 RAAASNLGKFATTVESTFLIAEIMTMFDDLTKDDQDSVRLLAVEGCAALGKLLEPQDCVA 240
Query: 241 HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEHSREQLVPAYVRLLRDNEAEVRIAA 300
ILPVIVNFSQDKSWRVRYMVANQLYELCEAVGP+ +R LVPAYVRLLRDNEAEVRIAA
Sbjct: 241 RILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDCTRTDLVPAYVRLLRDNEAEVRIAA 300
Query: 301 AGKVTKFCRILSPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLL 360
AGKVTKFCR+L+P+LAIQHILPCVKELSSDSSQHVRSALASVIMGMAP+LGK++TIE LL
Sbjct: 301 AGKVTKFCRLLNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPILGKDSTIEHLL 360
Query: 361 PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY 420
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
Sbjct: 361 PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY 420
Query: 421 IPLLASQLGVGFFDDKLGALCMQWLEDKVFSIRDAAANNLKRLAEEFGPEWAMQHIIPQV 480
+PLLASQLG+GFFDDKLGALCMQWL+DKV+SIR+AAANNLKRLAEEFGPEWAMQH++PQV
Sbjct: 421 VPLLASQLGIGFFDDKLGALCMQWLQDKVYSIREAAANNLKRLAEEFGPEWAMQHLVPQV 480
Query: 481 LEKINNPHYLYRMTILQAISLLAPVMGAEITCQQLLPVVINSSKDRVPNIKFNVAKVLQA 540
L+ +NNPHYL+RM +L+AISL+APVMG+EITC + LPVV+ +SKDRVPNIKFNVAK+LQ+
Sbjct: 481 LDMVNNPHYLHRMMVLRAISLMAPVMGSEITCSKFLPVVVEASKDRVPNIKFNVAKLLQS 540
Query: 541 LIPILDQSVVEKNVKPCLVELSEDPDVDVRYYANQALQACD 581
LIPI+DQSVV+K ++ CLV+LSEDPDVDVRY+ANQAL + D
Sbjct: 541 LIPIVDQSVVDKTIRQCLVDLSEDPDVDVRYFANQALNSID 581
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.136 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,742,510
Number of extensions: 470869
Number of successful extensions: 1423
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1350
Number of HSP's successfully gapped: 7
Length of query: 587
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 483
Effective length of database: 8,255,305
Effective search space: 3987312315
Effective search space used: 3987312315
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)