BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0243200 Os09g0243200|AK107718
(155 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G08139.1 | chr5:2616487-2617617 FORWARD LENGTH=377 62 1e-10
AT5G15820.1 | chr5:5161787-5162833 FORWARD LENGTH=349 59 9e-10
AT3G02340.1 | chr3:477032-478261 FORWARD LENGTH=410 58 2e-09
AT5G60820.1 | chr5:24469636-24470895 FORWARD LENGTH=420 55 1e-08
AT5G01980.1 | chr5:375542-377023 FORWARD LENGTH=494 54 3e-08
AT5G59550.1 | chr5:23998422-23999645 REVERSE LENGTH=408 54 3e-08
AT3G46620.1 | chr3:17178837-17180024 REVERSE LENGTH=396 53 7e-08
AT2G39720.1 | chr2:16567506-16568711 REVERSE LENGTH=402 50 5e-07
AT3G60080.1 | chr3:22187635-22188555 FORWARD LENGTH=307 50 6e-07
AT4G28370.1 | chr4:14035016-14039122 FORWARD LENGTH=563 50 6e-07
AT1G60360.1 | chr1:22242748-22243731 REVERSE LENGTH=328 50 7e-07
AT1G55530.1 | chr1:20729472-20730527 REVERSE LENGTH=352 49 8e-07
AT5G55970.1 | chr5:22668019-22669312 FORWARD LENGTH=344 49 9e-07
AT5G56340.1 | chr5:22818254-22819444 FORWARD LENGTH=397 49 1e-06
AT2G44330.1 | chr2:18310621-18311163 FORWARD LENGTH=181 49 1e-06
AT3G19950.1 | chr3:6942853-6943839 FORWARD LENGTH=329 49 1e-06
AT3G10815.1 | chr3:3385009-3385608 REVERSE LENGTH=200 49 2e-06
AT5G64920.1 | chr5:25944338-25945342 REVERSE LENGTH=335 48 2e-06
AT1G35330.1 | chr1:12965046-12966113 FORWARD LENGTH=328 48 2e-06
AT4G26400.2 | chr4:13344953-13346023 REVERSE LENGTH=357 48 3e-06
AT3G55530.1 | chr3:20595300-20597188 REVERSE LENGTH=274 48 3e-06
AT1G26800.1 | chr1:9285576-9286190 REVERSE LENGTH=205 47 3e-06
AT4G18110.1 | chr4:10037077-10037718 REVERSE LENGTH=214 47 4e-06
AT1G74620.1 | chr1:28028252-28029001 FORWARD LENGTH=250 47 5e-06
AT4G26580.1 | chr4:13411705-13412889 REVERSE LENGTH=336 47 5e-06
AT2G40830.2 | chr2:17043642-17044628 FORWARD LENGTH=329 46 8e-06
AT3G56580.2 | chr3:20962563-20963525 FORWARD LENGTH=321 46 9e-06
>AT5G08139.1 | chr5:2616487-2617617 FORWARD LENGTH=377
Length = 376
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 85 VRLPCAHWYHAGCIGPWLRIRTNCPTCRAELPREPAAADWRVPRRPA 131
V+LPC H YH+ CI PWL++R CP CR ELP + A + R +R
Sbjct: 323 VQLPCNHKYHSECIVPWLKVRNTCPVCRYELPTDDAEYEQRKTQRTT 369
>AT5G15820.1 | chr5:5161787-5162833 FORWARD LENGTH=349
Length = 348
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 81 RQAVVRLPCAHWYHAGCIGPWLRIRTNCPTCRAELPRE 118
++ V RLPC H+YH CI PWL IR CP CR ELP +
Sbjct: 301 KEKVKRLPCKHYYHGECIIPWLGIRNTCPVCRHELPTD 338
>AT3G02340.1 | chr3:477032-478261 FORWARD LENGTH=410
Length = 409
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 81 RQAVVRLPCAHWYHAGCIGPWLRIRTNCPTCRAELPRE 118
+ V RLPC+H+YH CI PWL IR CP CR ELP +
Sbjct: 345 EEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYELPTD 382
>AT5G60820.1 | chr5:24469636-24470895 FORWARD LENGTH=420
Length = 419
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 24/37 (64%)
Query: 82 QAVVRLPCAHWYHAGCIGPWLRIRTNCPTCRAELPRE 118
+ V LPC H YH+ CI PWL IR CP CR ELP +
Sbjct: 383 KEVAELPCRHKYHSECIVPWLGIRNTCPVCRFELPSD 419
>AT5G01980.1 | chr5:375542-377023 FORWARD LENGTH=494
Length = 493
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 23/36 (63%)
Query: 81 RQAVVRLPCAHWYHAGCIGPWLRIRTNCPTCRAELP 116
R +LPC H YHA CI PWL R +CP CR ELP
Sbjct: 360 RNETTQLPCLHLYHAHCIVPWLSARNSCPLCRYELP 395
>AT5G59550.1 | chr5:23998422-23999645 REVERSE LENGTH=408
Length = 407
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 23/33 (69%)
Query: 87 LPCAHWYHAGCIGPWLRIRTNCPTCRAELPREP 119
+PC H +H CI PWL IR +CP CR ELP EP
Sbjct: 215 MPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEP 247
>AT3G46620.1 | chr3:17178837-17180024 REVERSE LENGTH=396
Length = 395
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 87 LPCAHWYHAGCIGPWLRIRTNCPTCRAELPREP 119
+PC H +H CI PWL IR +CP CR ELP +P
Sbjct: 231 MPCKHIFHGDCIVPWLSIRNSCPVCRFELPSDP 263
>AT2G39720.1 | chr2:16567506-16568711 REVERSE LENGTH=402
Length = 401
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%)
Query: 81 RQAVVRLPCAHWYHAGCIGPWLRIRTNCPTCRAELPRE 118
+ + +PC H YH CI PWL IR +CP CR ELP E
Sbjct: 211 KSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAE 248
>AT3G60080.1 | chr3:22187635-22188555 FORWARD LENGTH=307
Length = 306
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 82 QAVVRLPCAHWYHAGCIGPWLRIRTNCPTCRAELP 116
++ RLPC+H YH+ CI PWL +CP CR ELP
Sbjct: 180 ESARRLPCSHIYHSDCIVPWLSDHNSCPLCRFELP 214
>AT4G28370.1 | chr4:14035016-14039122 FORWARD LENGTH=563
Length = 562
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 88 PCAHWYHAGCIGPWLRIRTNCPTCRAELP 116
PC H++H+GC+ W+ I+ CPTCR LP
Sbjct: 532 PCEHFFHSGCLQRWMDIKMECPTCRRSLP 560
>AT1G60360.1 | chr1:22242748-22243731 REVERSE LENGTH=328
Length = 327
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 87 LPCAHWYHAGCIGPWLRIRTNCPTCRAELPREPAAADWR 125
LPC H YH CI PWLR+ +CP CR +LP A+ R
Sbjct: 240 LPCKHIYHKDCIVPWLRLNNSCPICRRDLPLVNTVAESR 278
>AT1G55530.1 | chr1:20729472-20730527 REVERSE LENGTH=352
Length = 351
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 87 LPCAHWYHAGCIGPWLRIRTNCPTCRAELPREPAAAD 123
+PC H +H+ C+ PWL + ++CP CR +LP + A D
Sbjct: 239 MPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTD 275
>AT5G55970.1 | chr5:22668019-22669312 FORWARD LENGTH=344
Length = 343
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 81 RQAVVRLPCAHWYHAGCIGPWLRIRTNCPTCRAELPR 117
++ V +LPC+H +H+ C+ WLRI + CP C+ +LPR
Sbjct: 307 KEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLPR 343
>AT5G56340.1 | chr5:22818254-22819444 FORWARD LENGTH=397
Length = 396
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 87 LPCAHWYHAGCIGPWLRIRTNCPTCRAELPR------EPAAADWRVPRRPAVAETAGSRL 140
+PC H +H CI PWL + ++CP CR ELP E RV R V ET+ +
Sbjct: 275 MPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKTDSERVLRTRNVRETSNGNV 334
>AT2G44330.1 | chr2:18310621-18311163 FORWARD LENGTH=181
Length = 180
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 20/31 (64%)
Query: 86 RLPCAHWYHAGCIGPWLRIRTNCPTCRAELP 116
RLPC H YH CI PWL +CP CR ELP
Sbjct: 111 RLPCNHLYHNDCIIPWLTSHNSCPLCRVELP 141
>AT3G19950.1 | chr3:6942853-6943839 FORWARD LENGTH=329
Length = 328
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 84 VVRLPCAHWYHAGCIGPWLRIRTNCPTCRAELPRE 118
V ++PC H +H C+ PWL + +CP CR ELP +
Sbjct: 229 VKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTD 263
>AT3G10815.1 | chr3:3385009-3385608 REVERSE LENGTH=200
Length = 199
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 86 RLPCAHWYHAGCIGPWLRIRTNCPTCRAELPRE 118
++PC H YH+ CI PWL R CP CR ELP++
Sbjct: 136 KMPCKHIYHSECILPWLVQRNTCPVCRKELPQD 168
>AT5G64920.1 | chr5:25944338-25945342 REVERSE LENGTH=335
Length = 334
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 86 RLPCAHWYHAGCIGPWLRIRTNCPTCRAELPREPAAADWRVPRR 129
+LPC H YH CI PWL R +CP CR +L + A + +R
Sbjct: 272 KLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEERKKR 315
>AT1G35330.1 | chr1:12965046-12966113 FORWARD LENGTH=328
Length = 327
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 88 PCAHWYHAGCIGPWLRIRTNCPTCRAELPREPAA 121
PC+H +HA CI WL R+ CP CRA LP +P +
Sbjct: 146 PCSHAFHASCIDVWLSSRSTCPVCRASLPPKPGS 179
>AT4G26400.2 | chr4:13344953-13346023 REVERSE LENGTH=357
Length = 356
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 86 RLPCAHWYHAGCIGPWLRIRTNCPTCRAELP 116
+PC H +H CI PWL + ++CP CR ELP
Sbjct: 256 EMPCKHKFHIRCIVPWLELHSSCPVCRYELP 286
>AT3G55530.1 | chr3:20595300-20597188 REVERSE LENGTH=274
Length = 273
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 82 QAVVRLPCAHWYHAGCIGPWLRIRTNCPTCR 112
+ V LPC H +HAGCI PWLR + CP C+
Sbjct: 222 EIVRTLPCLHQFHAGCIDPWLRQQGTCPVCK 252
>AT1G26800.1 | chr1:9285576-9286190 REVERSE LENGTH=205
Length = 204
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 81 RQAVVRLPCAHWYHAGCIGPWLRIRTNCPTCRAELP 116
+ V +PC H +H GCI WL +CP CR E+P
Sbjct: 123 EETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMP 158
>AT4G18110.1 | chr4:10037077-10037718 REVERSE LENGTH=214
Length = 213
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 84 VVRLPCAHWYHAGCIGPWLRIRTNCPTCRAELPREPAAAD 123
+++L C+H +H CI PWLR + +CPTCR ++ A D
Sbjct: 171 IMKLLCSHSFHKDCILPWLRCKRSCPTCRDDIHNRRAEED 210
>AT1G74620.1 | chr1:28028252-28029001 FORWARD LENGTH=250
Length = 249
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 84 VVRLPCAHWYHAGCIGPWLRIRTNCPTCRAELPRE 118
V +LPC H +H CI WL++ CP CR+ +P++
Sbjct: 197 VAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIPKD 231
>AT4G26580.1 | chr4:13411705-13412889 REVERSE LENGTH=336
Length = 335
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 81 RQAVVRLPCAHWYHAGCIGPWLRIRTNCPTCRAELPR 117
++ V +LPC+H +H C+ WLRI + CP C+ +LP
Sbjct: 299 KEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQDLPN 335
>AT2G40830.2 | chr2:17043642-17044628 FORWARD LENGTH=329
Length = 328
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 86 RLPCAHWYHAGCIGPWLRIRTNCPTCRAELP 116
++PC H YH+ CI PWL +CP CR ELP
Sbjct: 205 QMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 235
>AT3G56580.2 | chr3:20962563-20963525 FORWARD LENGTH=321
Length = 320
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 81 RQAVVRLPCAHWYHAGCIGPWLRIRTNCPTCRAELP 116
+ ++PC H YH+ CI PWL +CP CR ELP
Sbjct: 196 KSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.135 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,645,900
Number of extensions: 74566
Number of successful extensions: 488
Number of sequences better than 1.0e-05: 31
Number of HSP's gapped: 497
Number of HSP's successfully gapped: 31
Length of query: 155
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 65
Effective length of database: 8,639,129
Effective search space: 561543385
Effective search space used: 561543385
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 107 (45.8 bits)