BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0123100 Os09g0123100|AK103665
         (827 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G35430.1  | chr5:13662077-13665735 FORWARD LENGTH=787          524   e-149

>AT5G35430.1 | chr5:13662077-13665735 FORWARD LENGTH=787
          Length = 786

 Score =  524 bits (1349), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 320/809 (39%), Positives = 468/809 (57%), Gaps = 67/809 (8%)

Query: 22  GMLSVTAAMARDAAVLFQSRRYADCAEVLAQLLLKKEGDPKVLHNMAIAESFLDGCPDPK 81
            +LSVT+ +A+ A   FQS ++ +C +VL QL   K  DPKVLHNMAIAE F DGC + +
Sbjct: 23  AVLSVTSTLAKTALSYFQSGKFEECIDVLIQLDQMKHNDPKVLHNMAIAEYFKDGCSNSE 82

Query: 82  KLLEILGNVKRRSEELACASRQQTDSANXXXXXXXXXXXXXXIIPLISAANNATTYGDEF 141
           KL+E+L  VK++SE+L+ A++ Q ++AN                       N +   D F
Sbjct: 83  KLVEVLKRVKKQSEQLSSAAKDQVEAAN--------------------PGTNVSVSKDHF 122

Query: 142 DTTIITFNTAVILYHLHDYESALSILDPLYRNIEPIDETTALHVCFLLLDITLALQDASN 201
           D T+ T N AV  +HL+ Y  + SIL+PL++NI+ +DET AL +CFLLLDI+LA +DA N
Sbjct: 123 DRTVTTLNIAVTWFHLYHYSKSFSILEPLFQNIQRLDETIALQICFLLLDISLACRDAVN 182

Query: 202 AADIIQYLERSFGVVXXXXXXXXXXXXXXXXXXXXXXXXISTPPDSDSNTCAGGSENLSA 261
              +  Y++++FGV                         +S+   SD+        +L+A
Sbjct: 183 FLAVFDYMDKAFGVGFGSHEENGSTMQLSSNQVSRTSSLLSSSVASDT-----LRSDLTA 237

Query: 262 GNFS--DDTLEFESFYSTLDGGNQN--LGRPILNDFSRXXXXXXXXXXXXKVRLQIYKVR 317
              S  ++TL++E+  + ++   +   +G    N+  +            K+ LQ+YKVR
Sbjct: 238 AESSLCEETLDYENVLAEIEAEKRMKLVGHIPANNLLKTLSERSFSTADLKLELQLYKVR 297

Query: 318 LLLLTRNLKVAKRELKVLMNMARGRDSSTELLLKSQLEYARGNYRKAVKLLSTPNNRSEQ 377
            LLLTRNLK+AKRE+K  MN+A+ RDSS  LLLKSQLEYA GN+ KA+KLL       E 
Sbjct: 298 FLLLTRNLKLAKREVKHAMNIAQKRDSSMALLLKSQLEYAHGNHPKAMKLLLVSGIHKEA 357

Query: 378 AMLAMFYNNLGCILHQQRSIQTSVWCFSKALKYSLSLRSEKPCKLTAISQDKSCLISYNC 437
               +F NNLGCI +Q    Q S   F KAL+   SLR+ KP K  ++SQ+KS LI+YNC
Sbjct: 358 GTSGIFNNNLGCIFYQLGCYQASSVLFLKALRSCSSLRNGKPAKTFSLSQNKSMLITYNC 417

Query: 438 GIQHLMCGKPLLAARCFREAMPLLCNRSLFWLRFAECSLLALEKGILTSSGATSCNDEIE 497
           G+ +L  GKPLLAA+CF++A  +   + L WLR AEC ++AL+KG+L    ++    EI 
Sbjct: 418 GLLYLASGKPLLAAQCFQKASHVFRRQPLIWLRLAECCMMALQKGLLEGGNSSLDRSEIR 477

Query: 498 VDVMGSGKWRHLVINPVKPSHSSESGEEVSLDKYGNL--ISLRFARQCLLNAQILLDPS- 554
           V V+G G  R L+I         E    V L     L  +SL  AR CL N   LL+ S 
Sbjct: 478 VHVIGKGNRRQLMI---------EENGYVELAGSNQLSKLSLPLARVCLSNGIYLLNESL 528

Query: 555 ---TKENL--VIASGTEESNQTSLQGQKGSGQKNTTNTDSKPPGPALTNANGEQKGISNL 609
              +K +L  +++ G  E+     +G     ++  TNTDSK           E KG  + 
Sbjct: 529 SNDSKSDLGSILSVGMNETK----EGSSSDHEEGNTNTDSK-----------EAKGGMSQ 573

Query: 610 NVTLQSSLALYDDICRKENLKIKQAILGDLAFIELCLQNHLKALSIAKLLQQLPECSRMY 669
            + +Q+SL+ ++DI  +E   ++QA+  ++A++EL L N +KALS A  L QL +CS++Y
Sbjct: 574 EI-IQNSLSAFEDIRNREKQLMRQALFANMAYVELELANPIKALSAATSLLQLADCSKIY 632

Query: 670 VFLSHVYAAEALCALNRPKEAAEQLTVYLRDGDDIELPYSIENCEKALVEKDSDGEDSVA 729
           VFL H+YAAEALC LNRP EA   L+ YL   DD +LPY+ E+ ++      SD E+++ 
Sbjct: 633 VFLGHIYAAEALCLLNRPIEAGAHLSAYLLGQDDFKLPYAQEDFDQWWKHTSSDCEETLD 692

Query: 730 PVVTKLSSGESQYSESLKPEEAQGVLYIDLGMTAAVQGELEQANYMVSRGVALLPNNPRA 789
           P     S+G ++ S  LKPEEA+G L+ DL    A QG  +QA  +++  + LLPNN +A
Sbjct: 693 P-----STGNTRDSVFLKPEEARGALFADLAALLATQGHHDQAKSLITHALTLLPNNVQA 747

Query: 790 VLASVYVDLLQGKAQEAIAKLRRCRTVRF 818
            + +VY+DL+ G++Q+A+A+L++C  V F
Sbjct: 748 TVTAVYIDLMLGRSQDALARLKQCTHVSF 776



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.132    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,526,864
Number of extensions: 610788
Number of successful extensions: 1782
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1778
Number of HSP's successfully gapped: 1
Length of query: 827
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 720
Effective length of database: 8,173,057
Effective search space: 5884601040
Effective search space used: 5884601040
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)