BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0566900 Os08g0566900|AK100851
(187 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14305.1 | chr4:8235335-8236605 REVERSE LENGTH=186 266 5e-72
AT4G04470.1 | chr4:2227963-2229226 REVERSE LENGTH=191 196 7e-51
AT5G43140.1 | chr5:17321570-17323224 FORWARD LENGTH=255 71 3e-13
AT3G24570.1 | chr3:8966675-8968530 REVERSE LENGTH=236 68 3e-12
AT1G52870.2 | chr1:19685856-19687678 FORWARD LENGTH=367 65 2e-11
AT5G19750.1 | chr5:6677124-6679127 FORWARD LENGTH=289 65 3e-11
AT4G03410.2 | chr4:1501907-1503503 FORWARD LENGTH=362 60 6e-10
AT4G33905.1 | chr4:16254065-16255592 REVERSE LENGTH=262 59 2e-09
AT2G14860.1 | chr2:6387820-6389563 REVERSE LENGTH=253 53 1e-07
>AT4G14305.1 | chr4:8235335-8236605 REVERSE LENGTH=186
Length = 185
Score = 266 bits (679), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 125/177 (70%), Positives = 142/177 (80%)
Query: 1 MSDVVAMAGQAYMRQLQAHPLRTKAITSGVLAGCSDAIAQKISGVPNLQRRRLLLIMLYG 60
MSD+ A + Y+ QLQAHPLRTKAIT+GVLAGCSDAIAQKISGV +Q RRLLL+MLYG
Sbjct: 1 MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLMLYG 60
Query: 61 FAYAGPFGHFLHKLMDRFFXXXXXXXXXXXXVLVEQLTASPWNNMMFMMYYGLVVEGRPF 120
FAY GPFGHF HKLMD F VL+EQLT+SPWNN +FM YYGLVVEGRP+
Sbjct: 61 FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPW 120
Query: 121 SQVKSKLKKDYASVQLTAWKFWPIVSWINYEYMPLQLRVLFHSFVASCWAVFLNLKA 177
VK KL KDY ++QLTAWKFWPIV W+NY+Y+PLQ RVLF SFVASCW++FLNLKA
Sbjct: 121 KLVKHKLGKDYPTIQLTAWKFWPIVGWVNYQYVPLQFRVLFSSFVASCWSIFLNLKA 177
>AT4G04470.1 | chr4:2227963-2229226 REVERSE LENGTH=191
Length = 190
Score = 196 bits (498), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 121/168 (72%)
Query: 10 QAYMRQLQAHPLRTKAITSGVLAGCSDAIAQKISGVPNLQRRRLLLIMLYGFAYAGPFGH 69
Q Y+ QLQ HPLRTKAIT+GVL+G SD ++QK+SG+ +Q RR+LL +++ + GP GH
Sbjct: 12 QRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLGPAGH 71
Query: 70 FLHKLMDRFFXXXXXXXXXXXXVLVEQLTASPWNNMMFMMYYGLVVEGRPFSQVKSKLKK 129
F H +D+FF V++EQLT SP N+++FM+YYG+V+E P++ V+ ++KK
Sbjct: 72 FFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRERIKK 131
Query: 130 DYASVQLTAWKFWPIVSWINYEYMPLQLRVLFHSFVASCWAVFLNLKA 177
Y +VQLTAW F+P+V WINY+Y+PL RV+ HS VA W +FL L+A
Sbjct: 132 TYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRA 179
>AT5G43140.1 | chr5:17321570-17323224 FORWARD LENGTH=255
Length = 254
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 12 YMRQLQAHPLRTKAITSGVLAGCSDAIAQKISGVP--NLQRRRLLLIMLYGFAYAGPFGH 69
Y+R+L++HP TK+IT+ V+ +D +Q I+ P + R + +G + GP H
Sbjct: 82 YLRKLESHPFMTKSITTSVIYMAADLTSQMITMEPTGSFDLIRTARMASFGLIFLGPSQH 141
Query: 70 ----FLHKLMDRFFXXXXXXXXXXXXVLVEQLTASPWNNMMFMMYYGLVVEGRPFSQVKS 125
+L K++ + +++ Q+ P +N +F Y ++G ++ +
Sbjct: 142 LWFSYLSKILPK-----RDVLTTFKKIMMGQVLFGPVSNTVFYSY-NAALQGENSEEIVA 195
Query: 126 KLKKDYASVQLTAWKFWPIVSWINYEYMPLQLRVLFHSFVASCWAVFLNLKAARSIATS 184
+LK+D +WP+ ++ ++Y+P+ L+ L +S A W ++L A ++ A S
Sbjct: 196 RLKRDLLPTLKNGLMYWPVCDFVTFKYVPVHLQPLMNSSCAYIWTIYLTYMANQTKADS 254
>AT3G24570.1 | chr3:8966675-8968530 REVERSE LENGTH=236
Length = 235
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 37/186 (19%)
Query: 12 YMRQLQAHPLRTKAITSGVLAGCSDAIAQKISGVPNLQR--------------------- 50
Y R L HP++T+ I+SG L G D AQ I+ +R
Sbjct: 8 YQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIKVKW 67
Query: 51 ----------RRLLLIMLYGFAYAGPFGHFLHKLMDRFFXXX-----XXXXXXXXXVLVE 95
+R+ + ++GF + GP GHF ++ +D+F V ++
Sbjct: 68 KQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAMD 127
Query: 96 QLTASPWNNMMFMMYYGLVVEGRPFSQVKSKLKKDYASVQLTAWKFWPIVSWINYEYMPL 155
L P + ++F Y G G+ ++VK LK+D+ WP++ N+ Y+P+
Sbjct: 128 GLIFGPVDLLVFFTYMGFAT-GKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPV 186
Query: 156 QLRVLF 161
Q ++L+
Sbjct: 187 QYQLLY 192
>AT1G52870.2 | chr1:19685856-19687678 FORWARD LENGTH=367
Length = 366
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 8/180 (4%)
Query: 11 AYMRQLQAHPLRTKAITSGVLAGCSDAIAQKISGVP--NLQRRRLLLIMLYGFAYAGPFG 68
AY L+ +P+ K + SGV+ D IAQ G P + R R L L GF G
Sbjct: 172 AYEEALKQNPVLAKMVISGVVYSVGDWIAQCYEGKPLFEIDRARTLRSGLVGFTLHGSLS 231
Query: 69 HFLHKLMDRFFXXXXXXXXXXXXVLVEQLTASPWNNMMFMMYYGLVVEGRPFSQVKSKLK 128
HF ++ + F + + ++ WN++ F + L E P S K +LK
Sbjct: 232 HFYYQFCEELFPFQDWWVVPVKVAFDQTVWSAIWNSIYFTVLGFLRFES-PISIFK-ELK 289
Query: 129 KDYASVQLTAWKFWPIVSWINYEYMPLQLRVLFHSFVASCWAVFL----NLKAARSIATS 184
+ + WK WP I Y +P++ R+L+ V W L N K+ I+ S
Sbjct: 290 ATFLPMLTAGWKLWPFAHLITYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARISES 349
>AT5G19750.1 | chr5:6677124-6679127 FORWARD LENGTH=289
Length = 288
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 4/171 (2%)
Query: 12 YMRQLQAHPLRTKAITSGVLAGCSDAIAQ-KISGVPNLQRRRLLLIMLYGFAYAGPFGHF 70
Y L P+ TKA+T+ +L D I Q I+ +L ++R L G GP HF
Sbjct: 118 YQALLSNSPVLTKAVTAALLNLVGDLICQLTINKTSSLDKKRTLTFTFLGLGLVGPTLHF 177
Query: 71 LHKLMDRFFXXXXXXXXXXXXVLVEQLTASPWNNMMFMMYYGLVVEGRPFSQVKSKLKKD 130
+ + + +L++Q +P +F+ + +EG+P S V KL+++
Sbjct: 178 WYLYLSKV-VTASGLSGAVIRLLLDQFVFAPIFVGVFLSAV-VTLEGKP-SNVIPKLQQE 234
Query: 131 YASVQLTAWKFWPIVSWINYEYMPLQLRVLFHSFVASCWAVFLNLKAARSI 181
+ + W+ W ++N+ ++P +VL + VA W V L+ KA + +
Sbjct: 235 WTGAMIANWQLWIPFQFLNFRFVPQNYQVLASNVVALAWNVILSFKAHKEV 285
>AT4G03410.2 | chr4:1501907-1503503 FORWARD LENGTH=362
Length = 361
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
Query: 11 AYMRQLQAHPLRTKAITSGVLAGCSDAIAQKISGVP--NLQRRRLLLIMLYGFAYAGPFG 68
AY + L+ +P+ K SG++ D IAQ G P R R+L L GF G
Sbjct: 130 AYEQILKTNPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLS 189
Query: 69 HFLHKLMDRFFXXXXXXXXXXXXVLVEQLTASPWNNMMFMMYYGLVVEGRPFSQVKSKLK 128
H+ ++ + F + + ++ WN++ F + GL+ P + + S++K
Sbjct: 190 HYYYQFCEALFPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVL-GLLRFQSP-ADIFSEIK 247
Query: 129 KDYASVQLTAWKFWPIVSWINYEYMPLQLRVLFHSFVASCWAVFLN 174
+ + WK WP+ + Y +P+ R+L+ + W L+
Sbjct: 248 TTFLPMLTAGWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILS 293
>AT4G33905.1 | chr4:16254065-16255592 REVERSE LENGTH=262
Length = 261
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Query: 12 YMRQLQAHPLRTKAITSGVLAGCSDAIAQKI--SGVPNLQRRRLLLIMLYGFAYAGPFGH 69
Y+ +++ P+ TK++TS ++ +D +Q I + V + R + YG GP H
Sbjct: 86 YLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSYDLVRTARMGGYGLLILGPTLH 145
Query: 70 FLHKLMDRFFXXXXXXXXXXXXVLVEQLTASPWNNMMFMMYYGLVVEGRPFSQVKSKLKK 129
+ LM F + + + N + F + L +G S++ ++LK+
Sbjct: 146 YWFNLMSSLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAAL--QGENGSEIVARLKR 203
Query: 130 DYASVQLTAWKFWPIVSWINYEYMPLQLRVLFHSFVASCWAVFLNLKAARSIATS 184
D L +WP+ +I +++ P+ L+ L + + W +++ A+R+ T+
Sbjct: 204 DLLPTMLNGVMYWPLCDFITFKFCPVYLQPLVSNSFSYLWTIYITYMASRATPTA 258
>AT2G14860.1 | chr2:6387820-6389563 REVERSE LENGTH=253
Length = 252
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 12 YMRQLQAHPLRTKAITSGVLAGCSDAIAQKISGVPNLQRR--RLLLIMLYGFAYAGPFGH 69
Y+ +++HP+ TK++TS ++ +D +Q I+ + R + YG GP H
Sbjct: 77 YLGMVKSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLFVLGPTLH 136
Query: 70 FLHKLMDRFFXXXXXXXXXXXXVLVEQLTASPWNNMMFMMYYGL--VVEGRPFSQVKSKL 127
+ M R F + + + + +M ++++ L ++G S + ++L
Sbjct: 137 YWFNFMSRLFPKQDLITTFKKMAMGQTI----YGPIMTVIFFSLNASLQGERGSVILARL 192
Query: 128 KKDYASVQLTAWKFWPIVSWINYEYMPLQLRVLFHSFVASCWAVFLNLKAARS 180
K+D +WP+ +I + + P+ L+ L + + W +++ A R
Sbjct: 193 KRDLLPALFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMANRE 245
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.328 0.136 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,339,270
Number of extensions: 112984
Number of successful extensions: 290
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 280
Number of HSP's successfully gapped: 9
Length of query: 187
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 94
Effective length of database: 8,556,881
Effective search space: 804346814
Effective search space used: 804346814
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 108 (46.2 bits)