BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0558600 Os08g0558600|AK066924
(241 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54300.1 | chr3:20108355-20110127 REVERSE LENGTH=241 368 e-102
AT1G04760.1 | chr1:1334760-1336070 FORWARD LENGTH=221 267 4e-72
AT2G32670.1 | chr2:13857941-13859346 FORWARD LENGTH=286 266 1e-71
AT1G04750.1 | chr1:1331857-1333426 REVERSE LENGTH=220 260 4e-70
AT2G33120.2 | chr2:14043785-14045337 REVERSE LENGTH=230 253 5e-68
AT4G15780.1 | chr4:8980081-8981697 REVERSE LENGTH=223 224 2e-59
AT2G33110.1 | chr2:14041297-14042892 REVERSE LENGTH=218 208 2e-54
AT5G11150.1 | chr5:3546625-3547844 REVERSE LENGTH=222 145 1e-35
AT5G22360.1 | chr5:7404379-7405654 REVERSE LENGTH=222 138 2e-33
AT4G32150.1 | chr4:15526407-15527651 REVERSE LENGTH=220 135 1e-32
AT2G25340.1 | chr2:10792664-10793832 REVERSE LENGTH=220 126 8e-30
AT3G24890.2 | chr3:9098179-9098756 FORWARD LENGTH=125 82 2e-16
AT4G27840.1 | chr4:13865268-13866050 REVERSE LENGTH=261 67 1e-11
AT5G52990.1 | chr5:21484188-21485006 FORWARD LENGTH=273 56 1e-08
>AT3G54300.1 | chr3:20108355-20110127 REVERSE LENGTH=241
Length = 240
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/238 (73%), Positives = 202/238 (84%), Gaps = 1/238 (0%)
Query: 4 NKQSLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPPNTSKSTYSCDGHTFNFLVDR 63
+++ LIYSFVAKG+VVLAEHT +SGNFSTIAVQCLQKLP N+SK TYSCDGHTFNFLVD
Sbjct: 2 SQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVDN 61
Query: 64 GFVFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLXXXXXXXXFLLEDRFS 123
GFVFLVVADE+ GRSVPFVFL+RVKEDF +RY +SI + +HPL L DRFS
Sbjct: 62 GFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDD-LFGDRFS 120
Query: 124 IAYNLDREFGPRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILERGEKIEL 183
+AYNLDREFGP LK+HM YC++HPEE+SKLSK+KA +TEVKGIMMDNIEK+L+RGEKIEL
Sbjct: 121 VAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIEL 180
Query: 184 LVGKTETLQSQADSFHRHGRELRRKMWLQNLRFKLMVGGAVAALILFLWLIICGGFKC 241
LV KTE LQ QADSF R GR+LRRKMWLQ+L+ KLMV GAV + IL +W++ CGGFKC
Sbjct: 181 LVDKTENLQFQADSFQRQGRQLRRKMWLQSLQMKLMVAGAVFSFILIVWVVACGGFKC 238
>AT1G04760.1 | chr1:1334760-1336070 FORWARD LENGTH=221
Length = 220
Score = 267 bits (682), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 130/237 (54%), Positives = 171/237 (72%), Gaps = 20/237 (8%)
Query: 5 KQSLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPPNTSKSTYSCDGHTFNFLVDRG 64
+QSLIYSFVA+G+V+LAE+T F GNF+++A QCLQKLP + +K TY+CDGHTFN+L D G
Sbjct: 3 QQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLADNG 62
Query: 65 FVFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLXXXXXXXXFLLEDRFSI 124
F + VV E+ GR +P FL+RVKEDF +RYG +
Sbjct: 63 FTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAK-------------------- 102
Query: 125 AYNLDREFGPRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILERGEKIELL 184
A +L++EFG +LK+HM YC +HPEEISKLSKVKA +TEVKG+MM+NIEK+L+RGEKIELL
Sbjct: 103 ANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELL 162
Query: 185 VGKTETLQSQADSFHRHGRELRRKMWLQNLRFKLMVGGAVAALILFLWLIICGGFKC 241
V KTE L+SQA F G +++RK+W +N++ KL+V G + ALIL + L +C GFKC
Sbjct: 163 VDKTENLRSQAQDFRTQGTKMKRKLWFENMKIKLIVFGIIVALILIIILSVCHGFKC 219
>AT2G32670.1 | chr2:13857941-13859346 FORWARD LENGTH=286
Length = 285
Score = 266 bits (679), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/237 (55%), Positives = 173/237 (72%), Gaps = 20/237 (8%)
Query: 5 KQSLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPPNTSKSTYSCDGHTFNFLVDRG 64
+Q+LIYSFVA+G+V+L E+T F GNF+ +A QCLQKLP + +K TY+CDGHTFN+LV+ G
Sbjct: 68 QQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVENG 127
Query: 65 FVFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLXXXXXXXXFLLEDRFSI 124
F + VVA E+VGR +P FL+RVKEDF +RYG Q
Sbjct: 128 FTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQ-------------------- 167
Query: 125 AYNLDREFGPRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILERGEKIELL 184
A +L+REFG +LK+HM YC++HP+EISKL+KVKA +TEVKG+MM+NIEK+L+RGEKIELL
Sbjct: 168 ANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELL 227
Query: 185 VGKTETLQSQADSFHRHGRELRRKMWLQNLRFKLMVGGAVAALILFLWLIICGGFKC 241
V KTE L+SQA F G ++RRKMW +N++ KL+V G + LIL + L +CGGFKC
Sbjct: 228 VDKTENLRSQAQDFRTQGTKIRRKMWFENMKIKLIVLGIIITLILIIILSVCGGFKC 284
>AT1G04750.1 | chr1:1331857-1333426 REVERSE LENGTH=220
Length = 219
Score = 260 bits (665), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 131/237 (55%), Positives = 172/237 (72%), Gaps = 20/237 (8%)
Query: 5 KQSLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPPNTSKSTYSCDGHTFNFLVDRG 64
+QSLIYSFVA+G+V+L E T F GNF++IA QCLQKLP + +K TY+CDGHTFN+LV+ G
Sbjct: 3 QQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVEDG 62
Query: 65 FVFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLXXXXXXXXFLLEDRFSI 124
F + VVA ++ GR +P FL+RVKEDF +RYG Q
Sbjct: 63 FTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQ-------------------- 102
Query: 125 AYNLDREFGPRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILERGEKIELL 184
A +L++EFG +LK+HM YC++HP+EISKL+KVKA ++EVKG+MM+NIEK+L+RGEKIELL
Sbjct: 103 ANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELL 162
Query: 185 VGKTETLQSQADSFHRHGRELRRKMWLQNLRFKLMVGGAVAALILFLWLIICGGFKC 241
V KTE L+SQA F G ++RRKMWLQN++ KL+V + ALIL + L +C GFKC
Sbjct: 163 VDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIKLIVLAIIIALILIIVLSVCHGFKC 219
>AT2G33120.2 | chr2:14043785-14045337 REVERSE LENGTH=230
Length = 229
Score = 253 bits (647), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/245 (53%), Positives = 171/245 (69%), Gaps = 28/245 (11%)
Query: 5 KQSLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPPNTSKSTYSCDGHTFNFLVDRG 64
+QSLIYSFVA+G+V+L E T F GNF++IA QCLQKLP + +K TY+CDGHTFN+LV+ G
Sbjct: 3 QQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVENG 62
Query: 65 FV--------FLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLXXXXXXXXF 116
F + VVA ++ GR +P FL+RVKEDF +RYG Q
Sbjct: 63 FSESKYCSISYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQ------------ 110
Query: 117 LLEDRFSIAYNLDREFGPRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILE 176
A +L++EFG +LK+HM YC++HP+EISKL+KVKA ++EVKG+MM+NIEK+L+
Sbjct: 111 --------ANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLD 162
Query: 177 RGEKIELLVGKTETLQSQADSFHRHGRELRRKMWLQNLRFKLMVGGAVAALILFLWLIIC 236
RGEKIELLV KTE L+SQA F G ++RRKMW QN++ KL+V + ALIL + L IC
Sbjct: 163 RGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIKLIVLAIIIALILIIILSIC 222
Query: 237 GGFKC 241
GGF C
Sbjct: 223 GGFNC 227
>AT4G15780.1 | chr4:8980081-8981697 REVERSE LENGTH=223
Length = 222
Score = 224 bits (572), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 164/238 (68%), Gaps = 21/238 (8%)
Query: 5 KQSLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPPNT-SKSTYSCDGHTFNFLVDR 63
++S IYSFVA+G+++LAE+T F+GNF +IA QCLQKLP ++ SK TY+CD HTFNFLV+
Sbjct: 3 QESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVED 62
Query: 64 GFVFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLXXXXXXXXFLLEDRFS 123
G+ + VVA +++ + + FL+RVK DF +RYG + +
Sbjct: 63 GYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGG--------------------KASTA 102
Query: 124 IAYNLDREFGPRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILERGEKIEL 183
IA +L++EFGP +K+HM Y ++H EEI KL KVKA ++EVK IM++NI+K ++RGE + +
Sbjct: 103 IAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTV 162
Query: 184 LVGKTETLQSQADSFHRHGRELRRKMWLQNLRFKLMVGGAVAALILFLWLIICGGFKC 241
L KTE L+SQA + + G ++RRK+W QN++ KL+V G + L+L +W+ +C GF C
Sbjct: 163 LTDKTENLRSQAREYKKQGTQVRRKLWYQNMKIKLVVLGILLLLVLIIWISVCHGFNC 220
>AT2G33110.1 | chr2:14041297-14042892 REVERSE LENGTH=218
Length = 217
Score = 208 bits (529), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 155/237 (65%), Gaps = 24/237 (10%)
Query: 5 KQSLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPPNTSKSTYSCDGHTFNFLVDRG 64
+QSL YSF+A+G+V+L E T F GNF+++A Q L+ LP + +K TY+CDGHTFN LV+ G
Sbjct: 3 QQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENG 62
Query: 65 FVFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLXXXXXXXXFLLEDRFSI 124
F + VVA ++ GR +P FL+RVKEDF +RYG Q
Sbjct: 63 FTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQ-------------------- 102
Query: 125 AYNLDREFGPRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILERGEKIELL 184
A +L++EFG LK+HM YC++HP+EIS L+K KA ++EVK +MM+NIEK+L RG E+L
Sbjct: 103 ANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEML 162
Query: 185 VGKTETLQSQADSFHRHGRELRRKMWLQNLRFKLMVGGAVAALILFLWLIICGGFKC 241
G +E SQ +F+ +++RK W QN++ KL+V + ALIL + L +CGGF C
Sbjct: 163 -GSSE---SQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNC 215
>AT5G11150.1 | chr5:3546625-3547844 REVERSE LENGTH=222
Length = 221
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 131/234 (55%), Gaps = 24/234 (10%)
Query: 7 SLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPPNTSKS--TYSCDGHTFNFLVDRG 64
++I++ VA+G+VVL+E +A S N S+I+ Q L+KLP N S S +YS D + F+ G
Sbjct: 2 AIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDG 61
Query: 65 FVFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLXXXXXXXXFLLEDRFSI 124
L +ADE GR++PF FLD + + F++ YG +I +
Sbjct: 62 LTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHS---------------------AQ 100
Query: 125 AYNLDREFGPRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILERGEKIELL 184
AY+++ EF L M + N P ++S++K +++V+ +M++NI+K+L+RGE++ELL
Sbjct: 101 AYSMNDEFSRVLSQQMEFYSNDPNA-DRMSRIKGEMSQVRNVMIENIDKVLDRGERLELL 159
Query: 185 VGKTETLQSQADSFHRHGRELRRKMWLQNLRFKLMVGGAVAALILFLWLIICGG 238
V KTE +Q F + R R MW +N++ + + +A ++ +C G
Sbjct: 160 VDKTENMQGNTFRFRKQARRYRTIMWWRNVKLTIALILVLALVVYIAMAFVCHG 213
>AT5G22360.1 | chr5:7404379-7405654 REVERSE LENGTH=222
Length = 221
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 133/238 (55%), Gaps = 32/238 (13%)
Query: 7 SLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPPNTS--KSTYSCDGHTFNFLVDRG 64
+++Y+ VA+G+VVLAE +A +GN + + L+KL P S + +S D + F+ L G
Sbjct: 2 AIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDG 61
Query: 65 FVFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLXXXXXXXXFLLEDRFSI 124
FL +A++ GR VPF +L+ + FM+ YG +
Sbjct: 62 LTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHN---------------------AP 100
Query: 125 AYNLDREFGPRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILERGEKIELL 184
AY ++ EF L M + ++P + L++V+ ++E++ +M++NIEKI+ERG++IELL
Sbjct: 101 AYAMNDEFSRVLHQQMEFFSSNPS-VDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELL 159
Query: 185 VGKTETLQSQADSFHRHGRELRRKMWLQNLRFKLMVGGAVAALILFLWLII----CGG 238
V KT T+Q + F + + LRR +W++N KL+V + LI+FL II CGG
Sbjct: 160 VDKTATMQDSSFHFRKQSKRLRRALWMKNA--KLLV--LLTCLIVFLLYIIIASFCGG 213
>AT4G32150.1 | chr4:15526407-15527651 REVERSE LENGTH=220
Length = 219
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 118/210 (56%), Gaps = 23/210 (10%)
Query: 7 SLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLP-PNTSKSTYSCDGHTFNFLVDRGF 65
+++Y+ VA+G+VVL+E TA S N STIA Q L+K+P N S +YS D + F+ G
Sbjct: 2 AILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGL 61
Query: 66 VFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLXXXXXXXXFLLEDRFSIA 125
L +A+E GR +PF FL+ + + F++ YG ++ ++A
Sbjct: 62 TVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHT---------------------ALA 100
Query: 126 YNLDREFGPRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILERGEKIELLV 185
Y ++ EF L + Y N P +++++K + +V+G+M++NI+K+L+RGE++ELLV
Sbjct: 101 YAMNEEFSRVLSQQIDYYSNDPNA-DRINRIKGEMNQVRGVMIENIDKVLDRGERLELLV 159
Query: 186 GKTETLQSQADSFHRHGRELRRKMWLQNLR 215
KT +Q F + R R +W +N +
Sbjct: 160 DKTANMQGNTFRFRKQARRFRSNVWWRNCK 189
>AT2G25340.1 | chr2:10792664-10793832 REVERSE LENGTH=220
Length = 219
Score = 126 bits (317), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 112/210 (53%), Gaps = 23/210 (10%)
Query: 7 SLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPPN-TSKSTYSCDGHTFNFLVDRGF 65
S++Y+ VA+G+VVLAE + S N STIA Q L+K+P N S +YS D + F+ G
Sbjct: 2 SILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGL 61
Query: 66 VFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLXXXXXXXXFLLEDRFSIA 125
L +ADE GR +PF FL+ + + F++ YG +I + A
Sbjct: 62 TVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHS---------------------AQA 100
Query: 126 YNLDREFGPRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILERGEKIELLV 185
Y ++ EF L + Y N P +S++K + +V+ +M++NI+ IL+RGE++ELLV
Sbjct: 101 YAMNDEFSRVLNQQIEYYSNDPNA-DTISRIKGEMNQVRDVMIENIDNILDRGERLELLV 159
Query: 186 GKTETLQSQADSFHRHGRELRRKMWLQNLR 215
KT +Q F + R +W +N +
Sbjct: 160 DKTANMQGNTFRFRKQTRRFNNTVWWRNCK 189
>AT3G24890.2 | chr3:9098179-9098756 FORWARD LENGTH=125
Length = 124
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 70/102 (68%), Gaps = 14/102 (13%)
Query: 135 RLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILERGEKIELLVGKTETLQSQ 194
+L+ +L + HPEEISKL+KVKA +T++KG+MM+NIEK L+R EKI++LV L+S+
Sbjct: 14 QLEQRVLVLLAHPEEISKLAKVKALVTKMKGVMMENIEKALDRSEKIKILVD----LRSK 69
Query: 195 ADS--FHRHGRE--------LRRKMWLQNLRFKLMVGGAVAA 226
+ F +G+E + RKMW QN++FKL+V G ++
Sbjct: 70 YSNLPFPSYGQEDIITPGTKITRKMWFQNMKFKLIVLGTSSS 111
>AT4G27840.1 | chr4:13865268-13866050 REVERSE LENGTH=261
Length = 260
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 52/275 (18%)
Query: 1 MNGNKQSLIYSFVAKGSVVLAEHTAFS-GNFSTIAVQCLQKLPPNTSKSTYSCDGHTFNF 59
M N++ L YS +AKG+V+LAE + +A++C++ +PP+ S +++ T+
Sbjct: 1 MTSNQRMLFYSCIAKGTVILAEFASKEEPGIEDLALRCIENVPPHHSMISHTVHKRTYAL 60
Query: 60 LVDRGFVFLVVADEAVGRSVPFVFLDRVK---EDFMQ--RYGSSIDEEGQHPLXXXXXXX 114
++D F + + DE V +S +R+K E M+ S+D QH L
Sbjct: 61 IIDGLFSYFAILDEVVAKSESVWLFNRLKSATESLMEDGSTADSLDNPTQHCLQSKLDP- 119
Query: 115 XFLLEDRFSIAYN----LDREFG-PRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMD 169
+ + +I N L+ EFG PR + N + SK K G +M
Sbjct: 120 --VFAEIAAIGGNHNKDLELEFGSPRSIAREIKSNNQSLDSSKGRK--------GGALMP 169
Query: 170 NIEKILERGEKIELLVGKTETLQSQADS-----------------------FHRHGRELR 206
+ G+ + +L K + LQ++A S H R+
Sbjct: 170 LL------GKPLRVLKNK-KRLQTEAKSEGHWNEKKMDLGGGGKGVRNGLIHDHHHRQKA 222
Query: 207 RKMWLQNLRFKLMVGGAVAALILFLWLIICGGFKC 241
+++W +++ LM + ++ +WL IC GF+C
Sbjct: 223 KQIWRKHVWIVLMFDLCICLVLFGIWLWICQGFQC 257
>AT5G52990.1 | chr5:21484188-21485006 FORWARD LENGTH=273
Length = 272
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 1 MNGNKQSLIYSFVAKGSVVLAEHTAFS-GNFSTIAVQCLQKLPPNTSKSTYSCDGHTFNF 59
M N L Y+ +AKG+VVLAE + IA++C++ PP+ S +++ T+ F
Sbjct: 1 MISNPSLLSYTCIAKGTVVLAEFVSRQEPGIEAIALRCIENTPPHHSMFSHTVHKKTYTF 60
Query: 60 LV-DRGFVFLVVADEAVGRSVPFVFLDRVK---EDFMQRYGSSID 100
+ D FV+ ++DE++ + F L+R++ ED ++ GS ++
Sbjct: 61 AIDDDSFVYFSISDESMEKPESFWVLNRLRSAIEDLIKDGGSDVE 105
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.140 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,126,327
Number of extensions: 200072
Number of successful extensions: 758
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 738
Number of HSP's successfully gapped: 14
Length of query: 241
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 145
Effective length of database: 8,474,633
Effective search space: 1228821785
Effective search space used: 1228821785
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 110 (47.0 bits)