BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0554000 Os08g0554000|AK111661
(351 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G20540.1 | chr1:7112652-7115191 FORWARD LENGTH=352 479 e-136
AT1G76260.1 | chr1:28610363-28612998 FORWARD LENGTH=351 460 e-130
AT2G16780.1 | chr2:7281615-7283583 REVERSE LENGTH=416 61 7e-10
AT1G29260.1 | chr1:10224923-10225876 FORWARD LENGTH=318 60 1e-09
AT4G35050.1 | chr4:16682752-16684751 REVERSE LENGTH=425 58 7e-09
AT4G02730.1 | chr4:1207759-1209066 FORWARD LENGTH=334 56 2e-08
AT2G41500.1 | chr2:17304319-17306855 REVERSE LENGTH=555 54 2e-07
AT2G05720.1 | chr2:2147192-2148215 FORWARD LENGTH=277 52 7e-07
AT2G19520.1 | chr2:8456006-8459235 FORWARD LENGTH=508 50 1e-06
AT5G58230.1 | chr5:23556112-23557994 FORWARD LENGTH=425 49 5e-06
>AT1G20540.1 | chr1:7112652-7115191 FORWARD LENGTH=352
Length = 351
Score = 479 bits (1234), Expect = e-136, Method: Compositional matrix adjust.
Identities = 226/351 (64%), Positives = 277/351 (78%), Gaps = 2/351 (0%)
Query: 1 MQGGSSGIVYGGLKYQARCIADVRAAAGSTTFLAGTLSLKEENEVHLIRFSPAESELVCD 60
MQGGSSGI YG LKYQ+RCI+DV+A T+FL GTLSLKEENEVHL+R S SEL+C+
Sbjct: 1 MQGGSSGIGYG-LKYQSRCISDVKADTDYTSFLTGTLSLKEENEVHLLRLSSGGSELICE 59
Query: 61 GLFYHPNEIWDLKSCPFDHRVFSTVYTSGEGYGASVWKIPELHGQSNSPPLEQLFTLDEH 120
GLF HPNEIWDL SCPFD R+FSTV+++GE +GA++W+IPEL+GQ NSP LE++ +LD H
Sbjct: 60 GLFSHPNEIWDLASCPFDQRIFSTVFSTGESFGAAIWQIPELYGQLNSPQLERVASLDAH 119
Query: 121 TGKIRCVLWWPLGKHDKLISIDDRNIFLWNIDASNKSAKVMQKGSADMLPNLRGGSWDPH 180
GKI CVLWWP G+ DKLISID++NIFLW++D S KSA+V+ K SA ML +L GG+WDPH
Sbjct: 120 VGKINCVLWWPSGRCDKLISIDEQNIFLWSLDCSKKSAEVLSKDSAGMLHSLSGGAWDPH 179
Query: 181 DHNSIAAITDSSLHCWDLRSMKKSNAIEHAHFRDVDYNPKKQHLITTAEDEFGIRLWDLR 240
D N++AA +SS+ WDLR+MKK N+IEHAH R VDYNPK++H++ TAEDE GI +WDLR
Sbjct: 180 DVNAVAATGESSVQFWDLRTMKKVNSIEHAHVRGVDYNPKREHILVTAEDESGIHVWDLR 239
Query: 241 MLKYPLKNLPGHSHWTWAVRHNPEHDQLILSAGTDSTVNLWFAKVXXXXXXXXXX-XXXX 299
K P++ LPGH+HWTWAVR NPE+D LILSAGTDS VNLW+A
Sbjct: 240 KAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLWYASATSSDDKTSESPVEST 299
Query: 300 XXXXXXLLNSYTDYEDSIYGIAWSSHDPSLFASLSYDGRVVLESVKPYLQR 350
LLNSYTDYEDS+YG+AWSS +P +FASLSYDGRV++ESVKP+L R
Sbjct: 300 RQRVNPLLNSYTDYEDSVYGLAWSSREPWVFASLSYDGRVIIESVKPFLPR 350
>AT1G76260.1 | chr1:28610363-28612998 FORWARD LENGTH=351
Length = 350
Score = 460 bits (1184), Expect = e-130, Method: Compositional matrix adjust.
Identities = 216/351 (61%), Positives = 273/351 (77%), Gaps = 1/351 (0%)
Query: 1 MQGGSSGIVYGGLKYQARCIADVRAAAGSTTFLAGTLSLKEENEVHLIRFSPAESELVCD 60
MQGGSSGI YG LKYQARCI+DV+A T+FL GTLSLKEENEVHL+R S SEL+C+
Sbjct: 1 MQGGSSGIGYG-LKYQARCISDVKADRDHTSFLTGTLSLKEENEVHLLRLSSGGSELLCE 59
Query: 61 GLFYHPNEIWDLKSCPFDHRVFSTVYTSGEGYGASVWKIPELHGQSNSPPLEQLFTLDEH 120
GLF HPNEIWDL S PFD R+FSTV+++G+ YGA++W+IPE +GQSNS LE + +LD H
Sbjct: 60 GLFSHPNEIWDLASSPFDQRIFSTVFSTGDSYGAAIWQIPEPYGQSNSSTLECVASLDAH 119
Query: 121 TGKIRCVLWWPLGKHDKLISIDDRNIFLWNIDASNKSAKVMQKGSADMLPNLRGGSWDPH 180
GKI CVLW P G DKLIS+D++N+ W++D+S KSA+V+ K SA M +L GG+W+PH
Sbjct: 120 VGKINCVLWCPSGNSDKLISMDEQNLVFWSLDSSKKSAEVLSKESAGMRHSLSGGAWNPH 179
Query: 181 DHNSIAAITDSSLHCWDLRSMKKSNAIEHAHFRDVDYNPKKQHLITTAEDEFGIRLWDLR 240
D NS+AA ++SS+ WDLR+MKK+N+IE AH R+VDYN K++H++ +A+DE GI LWDLR
Sbjct: 180 DVNSVAATSESSIQFWDLRTMKKNNSIERAHVRNVDYNLKREHILVSADDESGIHLWDLR 239
Query: 241 MLKYPLKNLPGHSHWTWAVRHNPEHDQLILSAGTDSTVNLWFAKVXXXXXXXXXXXXXXX 300
K+P++ LPGH+HWTWAVR NPE+++LILS GTDS VNLWFA
Sbjct: 240 KTKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLWFASASSEHKTSESPVEASR 299
Query: 301 XXXXXLLNSYTDYEDSIYGIAWSSHDPSLFASLSYDGRVVLESVKPYLQRK 351
LLNSYTDYEDS+YG+AWSS +P +FASLSYDGRVV+ESVKP+L R+
Sbjct: 300 QRVNPLLNSYTDYEDSVYGLAWSSREPWIFASLSYDGRVVIESVKPFLPRR 350
>AT2G16780.1 | chr2:7281615-7283583 REVERSE LENGTH=416
Length = 415
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 14/216 (6%)
Query: 129 WWPLGKHDKLISIDDRNIFLWNIDASNK----SAKVMQKGSADMLPNLRGGSWDPHDHNS 184
W P + L D+ I LW++ A+ + +A + +G + ++ SW + N
Sbjct: 176 WSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADV---SWHMKNENL 232
Query: 185 I-AAITDSSLHCWDLRSMKKSNAIEHAHFRDVDY---NPKKQHLITTAEDEFGIRLWDLR 240
+A D L WD R+ + + ++ H R+V+Y NP + ++ TA + + L+DLR
Sbjct: 233 FGSAGEDGRLVIWDTRTNQMQHQVK-VHEREVNYLSFNPFNEWVLATASSDSTVALFDLR 291
Query: 241 MLKYPLKNLPGHSHWTWAVRHNPEHDQLILSAGTDSTVNLWFAKVXXXXXXXXXXXXXXX 300
L PL + H + V +P H+ ++ S+G D + +W +
Sbjct: 292 KLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVW--DLNRVGEEQLEIELDAE 349
Query: 301 XXXXXLLNSYTDYEDSIYGIAWSSHDPSLFASLSYD 336
LL S+ ++ I AW+ ++P + AS++ D
Sbjct: 350 DGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAED 385
>AT1G29260.1 | chr1:10224923-10225876 FORWARD LENGTH=318
Length = 317
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 8/184 (4%)
Query: 101 ELHGQSNSPPLEQLFTLDEHTGKIRCVLWWPLGKHDKLISIDDRNIFLWNIDASNKSAKV 160
+++ + PP + + EH +++ V + P + L S D + LW +D
Sbjct: 86 KIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTF 145
Query: 161 MQKGSADMLPNLRGGSWDPHDHNSIAAIT-DSSLHCWDLRSMKKSNAIEHAHFR--DVDY 217
+ + W+P + A+ + D +L WD+R + I F D+
Sbjct: 146 KEHAYC-----VYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDW 200
Query: 218 NPKKQHLITTAEDEFGIRLWDLRMLKYPLKNLPGHSHWTWAVRHNPEHDQLILSAGTDST 277
N ++ T+ + +++WD+R + PL L GH + V+ +P LI S D +
Sbjct: 201 NKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMS 260
Query: 278 VNLW 281
V LW
Sbjct: 261 VCLW 264
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 180 HDHNSIAAITDSSLHCWDLRSMKKSNAI----EHA-HFRDVDYNPKKQHLITTAEDEFGI 234
HD IAAI D S+ +D SN I EHA + VDYNP ++ T+ + +
Sbjct: 72 HDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTV 131
Query: 235 RLWDLRMLKYPLKNLPGHSHWTWAVRHNPEHDQLILSAGTDSTVNLWFAKVXXXXXXXXX 294
+LW + ++ H++ + NP+H + SA D T+ +W +
Sbjct: 132 KLWAMDR-PASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVR---------- 180
Query: 295 XXXXXXXXXXXLLNSYTDYEDSIYGIAWSSHDPSLFASLSYDGRVVLESVKPY 347
++ D+E I W+ +D + A+ S D V + V+ Y
Sbjct: 181 ------EPGSTMIIPAHDFE--ILSCDWNKYDDCILATSSVDKTVKVWDVRSY 225
>AT4G35050.1 | chr4:16682752-16684751 REVERSE LENGTH=425
Length = 424
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 143 DRNIFLWNIDASNKSAKVMQ-----KGSADMLPNLRGGSWDPHDHNSI-AAITDSSLHCW 196
D+ I LW++ A+ + KV+ +G ++ ++ +W + N +A D L W
Sbjct: 191 DQRICLWDVSAT-ATDKVLNPMHVYEGHQSIIEDV---AWHMKNENIFGSAGDDCQLVIW 246
Query: 197 DLRSMKKSNAIEHAHFRDVDY---NPKKQHLITTAEDEFGIRLWDLRMLKYPLKNLPGHS 253
DLR+ + + ++ H R+++Y NP + ++ TA + + L+DLR L PL L H
Sbjct: 247 DLRTNQMQHQVK-VHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHE 305
Query: 254 HWTWAVRHNPEHDQLILSAGTDSTVNLWFAKVXXXXXXXXXXXXXXXXXXXXLLNSYTDY 313
+ V +P H+ ++ S+G D + +W + LL S+ +
Sbjct: 306 GEVFQVEWDPNHETVLASSGEDRRLMVW--DINRVGDEQLEIELDAEDGPPELLFSHGGH 363
Query: 314 EDSIYGIAWSSHDPSLFASLSYD 336
+ I AW+ +P + +S++ D
Sbjct: 364 KAKISDFAWNKDEPWVISSVAED 386
>AT4G02730.1 | chr4:1207759-1209066 FORWARD LENGTH=334
Length = 333
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 110 PLEQLFTLDEHTGKIRCVLWWPLGKHDKLISIDDRNIFLWNIDASNKSAKVMQKGSADML 169
P L TL+ HT I CV + G S+D + + LW+ A+N S +G + +
Sbjct: 32 PYRHLKTLEGHTAAISCVKFSNDGNLLASASVD-KTMILWS--ATNYSLIHRYEGHSSGI 88
Query: 170 PNLRGGSWDPHDHNSIAAITDSSLHCWDLRSMKKSNAIEHAHFR---DVDYNPKKQHLIT 226
+L +W H + +A D +L WD RS + + H V++NP +++
Sbjct: 89 SDL---AWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVS 145
Query: 227 TAEDEFGIRLWDLRMLKYPLKNLPGHSHWTWAVRHNPEHDQLILSAGTDSTVNLWFAK 284
+ DE IR+W+++ K ++ + HS +V N + LI+SA D + +W AK
Sbjct: 146 GSFDE-TIRIWEVKTGKC-VRMIKAHSMPISSVHFNRD-GSLIVSASHDGSCKIWDAK 200
>AT2G41500.1 | chr2:17304319-17306855 REVERSE LENGTH=555
Length = 554
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 114 LFTLDEHTGKIRCVLWWPLGKHDKLISIDDRNIFLWNIDASNKSAKVMQKGSADMLPNLR 173
L T + H ++ V + P GK+ S D + LW+I+ + ++Q+G + ++
Sbjct: 332 LQTFEGHLDRLARVAFHPSGKYLGTTSYD-KTWRLWDINTG--AELLLQEGHSR---SVY 385
Query: 174 GGSWDPHDHNSIAAITDSSLHCWDLRSMKKSNAIEHAHFR---DVDYNPKKQHLITTAED 230
G ++ + + DS WDLR+ +S + H + V+++P HL + ED
Sbjct: 386 GIAFQQDGALAASCGLDSLARVWDLRT-GRSILVFQGHIKPVFSVNFSPNGYHLASGGED 444
Query: 231 EFGIRLWDLRMLKYPLKNLPGHSHWTWAVRHNPEHDQLILSAGTDSTVNLWFAK 284
R+WDLRM K L +P H++ V++ P+ + +A D VN+W +
Sbjct: 445 N-QCRIWDLRMRK-SLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGR 496
>AT2G05720.1 | chr2:2147192-2148215 FORWARD LENGTH=277
Length = 276
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 190 DSSLHCWDLRSMKKSNAIEHAHFRDV---DYNPKKQHLITTAEDEFGIRLWDLRMLKYPL 246
DS WDLR+ + + I H + V D++P HL + ED R+WDLRM K L
Sbjct: 151 DSLARVWDLRTAR-NILIFQGHIKQVLSVDFSPNGYHLASGGEDN-QCRIWDLRMRKL-L 207
Query: 247 KNLPGHSHWTWAVRHNPEHDQLILSAGTDSTVNLWFAK 284
+P H + V++ P+ + +A D VN+W +
Sbjct: 208 YIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGR 245
>AT2G19520.1 | chr2:8456006-8459235 FORWARD LENGTH=508
Length = 507
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 123/329 (37%), Gaps = 43/329 (13%)
Query: 32 FLAGTLSLKEENEVHLIRFSPAESELVCDGLFYHPNEIWDLKSCPFDHRVFSTVYTSGEG 91
F+ ++ EV+ IR P S++V IWD+++ P H V + +
Sbjct: 154 FVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDL 213
Query: 92 YGASVWKIPELHGQSNSPPLEQLFTLDE----HTGKIRCVLWWPLGKHDKLISIDDRN-- 145
L G ++ E GK + V+ W + H I D ++
Sbjct: 214 I---------LTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSG 264
Query: 146 -IFLWNIDASNKS------AKVMQKGSADMLPNLRGGSWDPHDHNSIAAI-TDSSLHCWD 197
I + ++K+ + + G D + ++ ++ P ++ DS L WD
Sbjct: 265 SIIKQTGEGTDKNESPTVGPRGVYHGHEDTVEDV---AFSPTSAQEFCSVGDDSCLILWD 321
Query: 198 LRS-MKKSNAIEHAHFRD---VDYNPKKQHLITTAEDEFGIRLWDLRMLKY-----PLKN 248
R+ +E AH D VD+NP +LI T + +RL+D R L P+
Sbjct: 322 ARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYK 381
Query: 249 LPGHSHWTWAVRHNPEHDQLILSAGTDSTVNLW-FAKVXXXXXXXXXXXXXXXXXXXXLL 307
GH V+ +P+ + S+ D +N+W + +V L
Sbjct: 382 FEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRV-------SKKSDRAAKSPAGLF 434
Query: 308 NSYTDYEDSIYGIAWSSHDPSLFASLSYD 336
+ + D + W++ DP S+S D
Sbjct: 435 FQHAGHRDKVVDFHWNASDPWTIVSVSDD 463
>AT5G58230.1 | chr5:23556112-23557994 FORWARD LENGTH=425
Length = 424
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 29/234 (12%)
Query: 65 HPNEIWDLKSCPFDHRVFSTVYTSGEGYGASVWKIPELHGQSNSPPLEQL----FTLDEH 120
H E+ + P + + +T + E Y K P + PPL+ L H
Sbjct: 124 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHP------SKPPLDGACNPDLKLRGH 177
Query: 121 TGKIRCVLWWPLGKHDKLISIDDRNIFLWNIDAS--NKSAKVMQKGSA------DMLPNL 172
+ + + W + L DD I LW+I+A+ NKS Q A D+ +L
Sbjct: 178 SSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHL 237
Query: 173 RGGSWDPHDHNSIAAITDSSLHCWDLRSMKKSNAIEH--AHFRDVD---YNPKKQHLITT 227
R H++ + D L WDLRS S ++ AH +V+ +NP + ++ T
Sbjct: 238 R------HEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVAT 291
Query: 228 AEDEFGIRLWDLRMLKYPLKNLPGHSHWTWAVRHNPEHDQLILSAGTDSTVNLW 281
+ ++L+DLR L L H + V NP+++ ++ S + +W
Sbjct: 292 GSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,029,277
Number of extensions: 332033
Number of successful extensions: 1064
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 1075
Number of HSP's successfully gapped: 13
Length of query: 351
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 251
Effective length of database: 8,364,969
Effective search space: 2099607219
Effective search space used: 2099607219
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)