BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0548900 Os08g0548900|AK061808
(249 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66140.1 | chr5:26437445-26438677 REVERSE LENGTH=251 428 e-120
AT3G51260.1 | chr3:19031086-19032746 FORWARD LENGTH=251 425 e-119
AT3G22110.1 | chr3:7792819-7793571 REVERSE LENGTH=251 170 5e-43
AT1G16470.1 | chr1:5623122-5625439 FORWARD LENGTH=236 167 3e-42
AT1G79210.1 | chr1:29796286-29798240 REVERSE LENGTH=236 167 6e-42
AT1G53850.1 | chr1:20104131-20105792 REVERSE LENGTH=238 160 7e-40
AT3G14290.1 | chr3:4764364-4766381 FORWARD LENGTH=238 159 2e-39
AT5G35590.1 | chr5:13765417-13767768 REVERSE LENGTH=247 144 5e-35
AT2G05840.1 | chr2:2234226-2236053 FORWARD LENGTH=247 144 6e-35
AT5G42790.1 | chr5:17159270-17160975 REVERSE LENGTH=279 131 4e-31
AT1G47250.1 | chr1:17319220-17320900 FORWARD LENGTH=278 131 4e-31
AT4G15165.1 | chr4:8649460-8650212 FORWARD LENGTH=209 120 6e-28
AT2G27020.1 | chr2:11528515-11530858 REVERSE LENGTH=250 115 2e-26
>AT5G66140.1 | chr5:26437445-26438677 REVERSE LENGTH=251
Length = 250
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/229 (89%), Positives = 219/229 (95%), Gaps = 1/229 (0%)
Query: 1 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSM 60
MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVL VEKKSTPKLQDSRS
Sbjct: 1 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSA 60
Query: 61 RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYT 120
RKI SLD HIALACAGLKADARVLIN+AR+ECQSHRLT+EDPVTVEYITRYIAGLQQKYT
Sbjct: 61 RKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYT 120
Query: 121 QSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKD 180
QSGGVRPFGLSTLIVGFDPY+ P+LYQTDPSGTFSAWKANATGRNSNS+REFLEKNYK+
Sbjct: 121 QSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKE 180
Query: 181 TSGKETIKLAIRALLEVVESGGKNIEIAVMTHKD-GLRELEEAEIDEYV 228
+SG+ETIKLAIRALLEVVESGGKNIE+AVMT ++ GLR+LEEAEID V
Sbjct: 181 SSGQETIKLAIRALLEVVESGGKNIEVAVMTREETGLRQLEEAEIDAIV 229
>AT3G51260.1 | chr3:19031086-19032746 FORWARD LENGTH=251
Length = 250
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/226 (89%), Positives = 217/226 (96%), Gaps = 1/226 (0%)
Query: 1 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSM 60
MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVL VEKKSTPKLQDSRS
Sbjct: 1 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSA 60
Query: 61 RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYT 120
RKI SLD HIALACAGLKADARVLIN+AR+ECQSHRLT+EDPVTVEYITRYIAGLQQKYT
Sbjct: 61 RKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYT 120
Query: 121 QSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKD 180
QSGGVRPFGLSTLIVGFDPYT PALYQTDPSGTFSAWKANATGRNSNS+REFLEKNYK+
Sbjct: 121 QSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKE 180
Query: 181 TSGKETIKLAIRALLEVVESGGKNIEIAVMTHKDG-LRELEEAEID 225
++G+ET+KLAIRALLEVVESGGKNIE+AVMT ++G L++LEE EID
Sbjct: 181 SAGQETVKLAIRALLEVVESGGKNIEVAVMTREEGVLKQLEEEEID 226
>AT3G22110.1 | chr3:7792819-7793571 REVERSE LENGTH=251
Length = 250
Score = 170 bits (431), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 129/200 (64%), Gaps = 3/200 (1%)
Query: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKL-QDSRSMR 61
RYD T+FSP+G L+QVEYA+EA+ +A+G+ D VVL EKK T KL Q S S
Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAE 63
Query: 62 KIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQ 121
K+ +D H+A A AG+ +DA +LIN ARV+ Q + ++P+ VE + + + +Q YTQ
Sbjct: 64 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQ 123
Query: 122 SGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDT 181
GG+RPFG+S L G+D + LY +DPSG + WKA A G N+ + + L+++YKD
Sbjct: 124 FGGLRPFGVSFLFAGWDKH-HGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDD 182
Query: 182 SGK-ETIKLAIRALLEVVES 200
+ + E ++LA++ L + ++S
Sbjct: 183 ATREEAVELALKVLTKTMDS 202
>AT1G16470.1 | chr1:5623122-5625439 FORWARD LENGTH=236
Length = 235
Score = 167 bits (424), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 139/230 (60%), Gaps = 5/230 (2%)
Query: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMR 61
++Y ++T FSP G L Q+E+AL AV G ++G++ ++ VV+ EKK L D S++
Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQ 63
Query: 62 KIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQ 121
KI L +I + +G+ D RVL+ ++R + + + ++P+ V + R A + Q++TQ
Sbjct: 64 KIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQ 123
Query: 122 SGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KD 180
SGGVRPFG+S L+ G+D + P LYQ DPSG++ +WKA+A G+N ++ + FLEK Y +D
Sbjct: 124 SGGVRPFGVSLLVAGYD--DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED 181
Query: 181 TSGKETIKLAIRALLEVVES--GGKNIEIAVMTHKDGLRELEEAEIDEYV 228
+ I AI L E E KNIEI + R L AEID+Y+
Sbjct: 182 MELDDAIHTAILTLKEGFEGEISSKNIEIGKIGADKVFRVLTPAEIDDYL 231
>AT1G79210.1 | chr1:29796286-29798240 REVERSE LENGTH=236
Length = 235
Score = 167 bits (422), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 138/230 (60%), Gaps = 5/230 (2%)
Query: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMR 61
++Y ++T FSP G L Q+E+AL AV G ++G++ ++ VV+ EKK L D S++
Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQ 63
Query: 62 KIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQ 121
KI L +I +G+ D RVL+ ++R + + + ++P+ V + R A + Q++TQ
Sbjct: 64 KIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQ 123
Query: 122 SGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KD 180
SGGVRPFG+S L+ G+D + P LYQ DPSG++ +WKA+A G+N ++ + FLEK Y +D
Sbjct: 124 SGGVRPFGVSLLVAGYD--DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED 181
Query: 181 TSGKETIKLAIRALLEVVES--GGKNIEIAVMTHKDGLRELEEAEIDEYV 228
+ I AI L E E KNIEI + R L AEID+Y+
Sbjct: 182 MELDDAIHTAILTLKEGFEGEISSKNIEIGKIGTDKVFRVLTPAEIDDYL 231
>AT1G53850.1 | chr1:20104131-20105792 REVERSE LENGTH=238
Length = 237
Score = 160 bits (404), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 126/211 (59%), Gaps = 8/211 (3%)
Query: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKI 63
YDR + FSP+G LFQVEYA+EA++ G+ A+GV+ + VVL VEK+ T L + S+ KI
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKI 67
Query: 64 ASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKY---T 120
+D HI A +GL ADAR L+ ARVE Q+HR + +P+TVE T+ + L ++
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127
Query: 121 QSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-K 179
+ RPFG+S LI G D P+LY TDPSGTF A A G S L++ + K
Sbjct: 128 EESMSRPFGVSLLIAGHD--ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNK 185
Query: 180 DTSGKETIKLAIRALLEVVESG--GKNIEIA 208
D S +E +A+ L +V+E N++IA
Sbjct: 186 DLSLQEAETIAVSILKQVMEEKVTPNNVDIA 216
>AT3G14290.1 | chr3:4764364-4766381 FORWARD LENGTH=238
Length = 237
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 126/211 (59%), Gaps = 8/211 (3%)
Query: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKI 63
YDR + FSP+G LFQVEYA+EA++ G+ A+GV+ + VVL VEK+ T L + S+ KI
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKI 67
Query: 64 ASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKY---T 120
+D HI A +GL ADAR L+ ARVE Q+HR + +P+TVE T+ + L ++
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127
Query: 121 QSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-K 179
+ RPFG+S LI G D P+LY TDPSGTF A A G S L++ + K
Sbjct: 128 EESMSRPFGVSLLIAGHD--ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNK 185
Query: 180 DTSGKETIKLAIRALLEVVESG--GKNIEIA 208
D + +E +A+ L +V+E N++IA
Sbjct: 186 DITLQEAETIAVSILKQVMEEKVTPNNVDIA 216
>AT5G35590.1 | chr5:13765417-13767768 REVERSE LENGTH=247
Length = 246
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 125/234 (53%), Gaps = 8/234 (3%)
Query: 2 ARYDRAITVFSPDGHLFQVEYALEAVR-KGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSM 60
A YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D S+
Sbjct: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSV 66
Query: 61 RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYT 120
+ + +I L G+ ADAR L+ +AR + R T + V+ + ++IA Q YT
Sbjct: 67 THLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYT 126
Query: 121 QSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKD 180
Q +RP G+ +++G D P LY+ DP+G F KA + G FLEK K+
Sbjct: 127 QHAYMRPLGVVAMVMGVDE-ENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKE 185
Query: 181 TSG---KETIKLAIRALLEVVESGGKNIEI---AVMTHKDGLRELEEAEIDEYV 228
ET++ AI AL V++ K EI V R L EI+E++
Sbjct: 186 NPSFTFDETVQTAISALQSVLQEDFKATEIEVGVVRAENPEFRALTTEEIEEHL 239
>AT2G05840.1 | chr2:2234226-2236053 FORWARD LENGTH=247
Length = 246
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 127/234 (54%), Gaps = 8/234 (3%)
Query: 2 ARYDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTVVLGVEKKSTPKLQDSRSM 60
A YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D S+
Sbjct: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSV 66
Query: 61 RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYT 120
+ + ++ L G+ AD+R L+ +AR E R + + + ++IA Q YT
Sbjct: 67 SHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYT 126
Query: 121 QSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKD 180
Q +RP G+ +++G D P LY+ DP+G F KA + G FLEK K+
Sbjct: 127 QHAYMRPLGVVAMVLGIDE-ERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKE 185
Query: 181 TSG---KETIKLAIRALLEVVESGGK--NIEIAVMTHKDGL-RELEEAEIDEYV 228
ET++ AI AL V++ K IE+ V+ D L R L EIDE++
Sbjct: 186 NPAFTYDETVQTAISALQSVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDEHL 239
>AT5G42790.1 | chr5:17159270-17160975 REVERSE LENGTH=279
Length = 278
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 114/200 (57%), Gaps = 7/200 (3%)
Query: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRK 62
+YD +T +SP G LFQVEYA+EAV++G+AA+G+R VVL K+ +L S RK
Sbjct: 5 QYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL--SSHQRK 62
Query: 63 IASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQS 122
I +D HI +A AGL AD RVL R E +H T E P+ V + ++A Q TQ
Sbjct: 63 IFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQR 122
Query: 123 GGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK--- 179
RP+G+ L+ G D LY PSG + ++A A G S + + +LE+ ++
Sbjct: 123 SWKRPYGVGLLVGGLDE--SGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFG 180
Query: 180 DTSGKETIKLAIRALLEVVE 199
D+S ++ IK AI A+ E ++
Sbjct: 181 DSSREDLIKDAILAVRETLQ 200
>AT1G47250.1 | chr1:17319220-17320900 FORWARD LENGTH=278
Length = 277
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 115/200 (57%), Gaps = 7/200 (3%)
Query: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRK 62
+YD +T +SP G LFQVEYA+EAV++G+AA+G+R VVL K+ +L S RK
Sbjct: 5 QYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL--SSHQRK 62
Query: 63 IASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQS 122
I +D HI +A AGL AD RVL R E +H T E P+ V + ++A Q TQ
Sbjct: 63 IFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQR 122
Query: 123 GGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEK---NYK 179
RP+G+ L+ G D LY PSG + ++A A G S + + +LE+ +++
Sbjct: 123 SWKRPYGVGLLVGGLD--ESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQ 180
Query: 180 DTSGKETIKLAIRALLEVVE 199
++S ++ IK AI A+ E ++
Sbjct: 181 ESSKEDLIKDAIMAIRETLQ 200
>AT4G15165.1 | chr4:8649460-8650212 FORWARD LENGTH=209
Length = 208
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 45/200 (22%)
Query: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPK-LQDSRSMR 61
RYD T+FSP+G L+QVEYA+EA+ +A+G+ D VVL EKK T K LQ S SM
Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLVGEKKVTSKLLQTSSSME 63
Query: 62 KIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQ 121
K+ +D H+A A AG+ +DA +LIN ARV+ Q++ +
Sbjct: 64 KMYKIDDHVACAVAGIMSDANILINTARVQA------------------------QRWDR 99
Query: 122 SGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDT 181
+ G + LY +DPSG + W+A A G N+ + + L+++YKD
Sbjct: 100 NHGFQ-------------------LYMSDPSGNYGGWQAAAVGANNQAAQSILKQDYKDD 140
Query: 182 SGK-ETIKLAIRALLEVVES 200
+ + E ++LAI+ L + ++S
Sbjct: 141 ATREEVVQLAIKVLSKTMDS 160
>AT2G27020.1 | chr2:11528515-11530858 REVERSE LENGTH=250
Length = 249
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 100/185 (54%), Gaps = 3/185 (1%)
Query: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKI 63
YD ++T FSPDG +FQ+EYA +AV VG++ D +V+GVEK K+ S R+I
Sbjct: 8 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMMLPGSNRRI 67
Query: 64 ASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG 123
S+ H +A AGL AD R ++ RA+ E +S+ D V V+ ++ +A T
Sbjct: 68 HSVHRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYW 127
Query: 124 GVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEK-NYKDTS 182
+RPFG ++ G+D + P LY +PSG + A G+ + + +EK N + +
Sbjct: 128 WLRPFGCGVILGGYD--RDGPQLYMIEPSGISYRYFGAAIGKGKQAAKTEIEKLNLSEMT 185
Query: 183 GKETI 187
KE +
Sbjct: 186 CKEGV 190
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,722,658
Number of extensions: 185774
Number of successful extensions: 519
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 497
Number of HSP's successfully gapped: 14
Length of query: 249
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 153
Effective length of database: 8,474,633
Effective search space: 1296618849
Effective search space used: 1296618849
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 110 (47.0 bits)