BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0545500 Os08g0545500|Os08g0545500
         (251 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G25470.1  | chr4:13015436-13016086 REVERSE LENGTH=217           78   3e-15
AT4G25490.1  | chr4:13021921-13022562 REVERSE LENGTH=214           75   4e-14
AT4G25480.1  | chr4:13018353-13019003 REVERSE LENGTH=217           74   5e-14
AT5G51990.1  | chr5:21117113-21117787 REVERSE LENGTH=225           71   4e-13
AT1G12610.1  | chr1:4290205-4290834 REVERSE LENGTH=210             60   9e-10
AT1G63030.1  | chr1:23367603-23368148 REVERSE LENGTH=182           57   1e-08

>AT4G25470.1 | chr4:13015436-13016086 REVERSE LENGTH=217
          Length = 216

 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 82/193 (42%), Gaps = 25/193 (12%)

Query: 32  RLSPPSSKRPAGRTKFHETRHPVFXXXXXXXXXXXWVCEVRVPGRRGCRLWLGTFXXXXX 91
           +L+    K+PAGR KF ETRHP++           WVCE+R P ++  R+WLGTF     
Sbjct: 28  KLATSCPKKPAGRKKFRETRHPIY-RGVRQRNSGKWVCELREPNKK-TRIWLGTF-QTAE 84

Query: 92  XXXXXXXXXXXXXXXXXXCLNFADSAWLLAVPPPATLRCAADVQRAVARALEDFEQRESS 151
                             CLNFADSAW L +P      CA ++Q+A A A  +F+     
Sbjct: 85  MAARAHDVAAIALRGRSACLNFADSAWRLRIPEST---CAKEIQKAAAEAALNFQDEMCH 141

Query: 152 SSVFPLAIDVVAEDAMSATSEPXXXXXXXXXXXXXXXXXXXXXXXPFELDVVSDMGWSLY 211
            +     +D + E  + A   P                        F +D  + +G S  
Sbjct: 142 MTTDAHGLD-MEETLVEAIYTPEQSQDA------------------FYMDEEAMLGMSSL 182

Query: 212 YASLAEGLLMEPP 224
             ++AEG+L+  P
Sbjct: 183 LDNMAEGMLLPSP 195



>AT4G25490.1 | chr4:13021921-13022562 REVERSE LENGTH=214
          Length = 213

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 80/195 (41%), Gaps = 25/195 (12%)

Query: 30  CRRLSPPSSKRPAGRTKFHETRHPVFXXXXXXXXXXXWVCEVRVPGRRGCRLWLGTFXXX 89
           C  L+    K+PAGR KF ETRHP++           WV EVR P ++  R+WLGTF   
Sbjct: 23  CPTLATSCPKKPAGRKKFRETRHPIY-RGVRQRNSGKWVSEVREPNKK-TRIWLGTF-QT 79

Query: 90  XXXXXXXXXXXXXXXXXXXXCLNFADSAWLLAVPPPATLRCAADVQRAVARALEDFEQRE 149
                               CLNFADSAW L +P      CA D+Q+A A A   F+   
Sbjct: 80  AEMAARAHDVAALALRGRSACLNFADSAWRLRIPEST---CAKDIQKAAAEAALAFQDET 136

Query: 150 SSSSVFPLAIDVVAEDAMSATSEPXXXXXXXXXXXXXXXXXXXXXXXPFELDVVSDMGWS 209
             ++     +D + E  + A   P                        F +D  +  G  
Sbjct: 137 CDTTTTNHGLD-MEETMVEAIYTPEQSEGA------------------FYMDEETMFGMP 177

Query: 210 LYYASLAEGLLMEPP 224
               ++AEG+L+ PP
Sbjct: 178 TLLDNMAEGMLLPPP 192



>AT4G25480.1 | chr4:13018353-13019003 REVERSE LENGTH=217
          Length = 216

 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 61/127 (48%), Gaps = 6/127 (4%)

Query: 21  ASTTSSSEPCRRLSPPSSKRPAGRTKFHETRHPVFXXXXXXXXXXXWVCEVRVPGRRGCR 80
           +S +S  +    L+    K+PAGR KF ETRHP++           WVCEVR P ++  R
Sbjct: 17  SSVSSGGDYIPTLASSCPKKPAGRKKFRETRHPIY-RGVRRRNSGKWVCEVREPNKK-TR 74

Query: 81  LWLGTFXXXXXXXXXXXXXXXXXXXXXXXCLNFADSAWLLAVPPPATLRCAADVQRAVAR 140
           +WLGTF                       CLNFADSAW L +P      CA D+Q+A A 
Sbjct: 75  IWLGTF-QTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPEST---CAKDIQKAAAE 130

Query: 141 ALEDFEQ 147
           A   F+ 
Sbjct: 131 AALAFQD 137



>AT5G51990.1 | chr5:21117113-21117787 REVERSE LENGTH=225
          Length = 224

 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 82/201 (40%), Gaps = 21/201 (10%)

Query: 24  TSSSEPCRRLSPPSSKRPAGRTKFHETRHPVFXXXXXXXXXXXWVCEVRVPGRRGCRLWL 83
           + SSE   +L+    K+ AGR KF ETRHP++           WVCEVR P ++  R+WL
Sbjct: 23  SDSSECSPKLASSCPKKRAGRKKFRETRHPIY-RGVRQRNSGKWVCEVREPNKK-SRIWL 80

Query: 84  GTFXXXXXXXXXXXXXXXXXXXXXXXCLNFADSAWLLAVPPPATLRCAADVQRAVARALE 143
           GTF                       CLNFADSAW L +P      C  ++Q+A + A  
Sbjct: 81  GTF-PTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETT---CPKEIQKAASEAAM 136

Query: 144 DFEQRESSSSVFPLAIDVVAEDAMSATSEPXXXXXXXXXXXXXXXXXXXXXXXPFELDVV 203
            F+   ++      A    A        E                         F +D  
Sbjct: 137 AFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGV---------------FYMDDE 181

Query: 204 SDMGWSLYYASLAEGLLMEPP 224
           + +G   ++ ++AEG+L+ PP
Sbjct: 182 ALLGMPNFFENMAEGMLLPPP 202



>AT1G12610.1 | chr1:4290205-4290834 REVERSE LENGTH=210
          Length = 209

 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 55/126 (43%), Gaps = 8/126 (6%)

Query: 39  KRPAGRTKFHETRHPVFXXXXXXXXXXXWVCEVRVPGRRGCRLWLGTFXXXXXXXXXXXX 98
           K+ AGR  F ETRHPV+           WVCEVR P  +  R+WLGT+            
Sbjct: 14  KKRAGRRVFKETRHPVYRGIRRRNGDK-WVCEVREPTHQR-RIWLGTYPTADMAARAHDV 71

Query: 99  XXXXXXXXXXXCLNFADSAWLLAVPPPATLRCAADVQRAVARALEDFE--QRESSSSVFP 156
                      CLNFADSAW L VP          ++R  A A E F     ES  +V P
Sbjct: 72  AVLALRGRSA-CLNFADSAWRLPVPESNDPDV---IRRVAAEAAEMFRPVDLESGITVLP 127

Query: 157 LAIDVV 162
            A D V
Sbjct: 128 CAGDDV 133



>AT1G63030.1 | chr1:23367603-23368148 REVERSE LENGTH=182
          Length = 181

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 54/122 (44%), Gaps = 12/122 (9%)

Query: 39  KRPAGRTKFHETRHPVFXXXXXXXXXXXWVCEVRVPGRRGCRLWLGTFXXXXXXXXXXXX 98
           K+ AGR  F ETRHP++           WVCEVR P  +  R+WLGT+            
Sbjct: 14  KKRAGRRIFKETRHPIYRGVRRRDGDK-WVCEVREPIHQR-RVWLGTYPTADMAARAHDV 71

Query: 99  XXXXXXXXXXXCLNFADSAWLLAVP---PPATLRCAADVQRAVARALEDFEQRESSSSVF 155
                      CLNF+DSAW L VP    P T+R      R  A A E F   E S+ + 
Sbjct: 72  AVLALRGRSA-CLNFSDSAWRLPVPASTDPDTIR------RTAAEAAEMFRPPEFSTGIT 124

Query: 156 PL 157
            L
Sbjct: 125 VL 126



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.132    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,704,684
Number of extensions: 100247
Number of successful extensions: 439
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 425
Number of HSP's successfully gapped: 6
Length of query: 251
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 155
Effective length of database: 8,474,633
Effective search space: 1313568115
Effective search space used: 1313568115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)