BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0541400 Os08g0541400|AK068255
(261 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G43560.1 | chr2:18073995-18075385 REVERSE LENGTH=224 257 3e-69
AT5G45680.1 | chr5:18530894-18532128 FORWARD LENGTH=209 80 8e-16
AT4G39710.1 | chr4:18427249-18428325 REVERSE LENGTH=218 77 9e-15
AT3G25230.2 | chr3:9188257-9191175 FORWARD LENGTH=563 71 5e-13
AT5G48570.1 | chr5:19690746-19693656 REVERSE LENGTH=579 68 4e-12
AT5G48580.1 | chr5:19696156-19697304 REVERSE LENGTH=164 68 6e-12
AT3G60370.1 | chr3:22315000-22316533 REVERSE LENGTH=243 66 2e-11
AT3G25220.1 | chr3:9182691-9184463 FORWARD LENGTH=154 65 5e-11
AT3G10060.1 | chr3:3102291-3103801 FORWARD LENGTH=231 64 1e-10
AT5G05420.1 | chr5:1604040-1604823 REVERSE LENGTH=144 62 2e-10
AT4G25340.1 | chr4:12959657-12962632 REVERSE LENGTH=478 62 3e-10
AT5G64350.1 | chr5:25734810-25735990 REVERSE LENGTH=113 56 2e-08
AT5G13410.1 | chr5:4299830-4301706 REVERSE LENGTH=257 54 7e-08
AT3G12340.1 | chr3:3925720-3929346 REVERSE LENGTH=500 54 8e-08
AT4G19830.1 | chr4:10772579-10773933 REVERSE LENGTH=230 52 3e-07
>AT2G43560.1 | chr2:18073995-18075385 REVERSE LENGTH=224
Length = 223
Score = 257 bits (657), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 123/142 (86%), Positives = 134/142 (94%)
Query: 120 PPEEKPKLCDAACEKDLENVPMVTTESGLQYKDIKVGEGPSPPIGFQVAANYVAMVPNGQ 179
PPE+KP+LC+A CEK+LENVPMVTTESGLQYKDIKVG GPSPP+GFQVAANYVAMVP+GQ
Sbjct: 80 PPEDKPRLCEAECEKELENVPMVTTESGLQYKDIKVGRGPSPPVGFQVAANYVAMVPSGQ 139
Query: 180 IFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKVGGLRRLYIPGPLAFPKGLTSAPGRPR 239
IFDSSLEKG PY+FRVGSGQVIKGLDEGILSMK GG RRLYIPGPLAFPKGL SAPGRPR
Sbjct: 140 IFDSSLEKGLPYLFRVGSGQVIKGLDEGILSMKAGGKRRLYIPGPLAFPKGLVSAPGRPR 199
Query: 240 VAPSSPVMFDVNLLYIPGLDDE 261
VAP+SPV+FDV+L +IPGLD E
Sbjct: 200 VAPNSPVIFDVSLEFIPGLDSE 221
>AT5G45680.1 | chr5:18530894-18532128 FORWARD LENGTH=209
Length = 208
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 146 SGLQYKDIKVGEGPSPPIGFQVAANYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIKGLD 205
SGL + D VG GP G + A+YV + NG++FDSS +G+P FR+G G+VIKG D
Sbjct: 91 SGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWD 150
Query: 206 EGILS------MKVGGLRRLYIPGPLAF-PKGLTSAPGRPRVAPSSPVMFDVNLL 253
+GIL M GG R L IP LA+ +G G + P+S ++FD+ +
Sbjct: 151 QGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYI 205
>AT4G39710.1 | chr4:18427249-18428325 REVERSE LENGTH=218
Length = 217
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 70/120 (58%), Gaps = 11/120 (9%)
Query: 145 ESGLQYKDIKVGEGPSPPIGFQVAANYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIKGL 204
+SGL + D+ VG G P G V +Y A +G +FDSS ++ +P R+G G+VI+GL
Sbjct: 93 KSGLGFCDLDVGFGDEAPRGVLVNIHYTARFADGTLFDSSYKRARPLTMRIGVGKVIRGL 152
Query: 205 DEGILS------MKVGGLRRLYIPGPLAF---PKGLTSAPGRPRVAPSSPVMFDVNLLYI 255
D+GIL M+VGG R+L IP LA+ P G S G + ++ +++D+N + I
Sbjct: 153 DQGILGGEGVPPMRVGGKRKLQIPPKLAYGPEPAGCFS--GDCNIPGNATLLYDINFVEI 210
>AT3G25230.2 | chr3:9188257-9191175 FORWARD LENGTH=563
Length = 562
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 145 ESGLQYKDIKVGEG-PSPPIGFQVAANYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIKG 203
+ GL+ K +K GEG +P G +V +Y + +G FDSS ++ P+ F +G GQVIKG
Sbjct: 37 QQGLKKKLLKEGEGYETPENGDEVEVHYTGTLLDGTKFDSSRDRATPFKFTLGQGQVIKG 96
Query: 204 LDEGILSMKVGGLRRLYIPGPLAFPKGLTSAPGRPRVAPSSPVMFDVNLLYIPGLDD 260
D GI +MK G IP LA+ G + +P P + ++ + FDV LL + D
Sbjct: 97 WDIGIKTMKKGENAVFTIPAELAY--GESGSP--PTIPANATLQFDVELLKWDSVKD 149
>AT5G48570.1 | chr5:19690746-19693656 REVERSE LENGTH=579
Length = 578
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 141 MVTTESGLQYKDIKVGEG-PSPPIGFQVAANYVAMVPNGQIFDSSLEKGQPYIFRVGSGQ 199
M +SGL+ K +K E +P G +V +Y + +G FDSS ++G P+ F +G G
Sbjct: 41 MEIGKSGLKKKLVKECEKWDTPENGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGH 100
Query: 200 VIKGLDEGILSMKVGGLRRLYIPGPLAFPKGLTSAPGRPRVAPSSPVMFDVNLLYIPGLD 259
VIKG D GI +MK G IP LA+ G T +P P + P++ + FDV L+ +
Sbjct: 101 VIKGWDLGIKTMKKGENAIFTIPPELAY--GETGSP--PTIPPNATLQFDVELIAWRSVK 156
Query: 260 D 260
D
Sbjct: 157 D 157
>AT5G48580.1 | chr5:19696156-19697304 REVERSE LENGTH=164
Length = 163
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 164 GFQVAANYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKVGGLRRLYIPG 223
G + +Y + +G +FDSS E+G P+ F++GSGQVIKG D+G+L VG R+L IP
Sbjct: 52 GDTIKVHYRGKLTDGTVFDSSFERGDPFEFKLGSGQVIKGWDQGLLGACVGEKRKLKIPA 111
Query: 224 PLAFPKGLTSAPGRPRVAPSSPVMFDVNLLYI 255
L + G +P P + + ++FD L+ +
Sbjct: 112 KLGY--GEQGSP--PTIPGGATLIFDTELIAV 139
>AT3G60370.1 | chr3:22315000-22316533 REVERSE LENGTH=243
Length = 242
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 121 PEEKPKLCDAACE-KDLENVPMVTTESGLQYKDIKVGEGPSPPIGFQVAANYVAMVPNGQ 179
P+E P E K L + + +SGL Y+D VG+G P G QV +Y+ +G+
Sbjct: 94 PDEFPNFVREGFEVKVLASDNYIKADSGLIYRDFNVGQGDFPKDGQQVTFHYIGYNESGR 153
Query: 180 IFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKVGGLRRLYIPGPLAFPKGLTSAPGRPR 239
DS+ +G P R+G+ ++ G + GI MK GG RR+ IP L P G ++ +
Sbjct: 154 RIDSTYIQGSPARIRMGTNALVPGFEMGIRDMKPGGRRRIIIPPELGPPVGPSTFFSSKQ 213
Query: 240 VAPSSPVMFDVNLLYIPGLD 259
+FDV LL I +
Sbjct: 214 FE-----VFDVELLSIQNCE 228
>AT3G25220.1 | chr3:9182691-9184463 FORWARD LENGTH=154
Length = 153
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 164 GFQVAANYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKVGGLRRLYIPG 223
G ++ +Y + +G +FDSS E+G P F +G+GQVI G D+G+L VG R+L IP
Sbjct: 52 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGTGQVIPGWDQGLLGACVGEKRKLKIPS 111
Query: 224 PLAFPKGLTSAPGRPRVAPSSPVMFDVNLLYIPG 257
L + G +P P++ + ++FD L+ + G
Sbjct: 112 KLGY--GDNGSP--PKIPGGATLIFDTELVAVNG 141
>AT3G10060.1 | chr3:3102291-3103801 FORWARD LENGTH=231
Length = 230
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 133 EKDLENVPMVTTESGLQYKDIKVGEGPSPPIGFQVAANYVAMVPNGQIFDSSLEK----- 187
E D +P +GL+Y DIKVG G G +VA +YVA G F +S +
Sbjct: 97 ESDFTTLP-----NGLKYYDIKVGNGAEAVKGSRVAVHYVAKW-KGITFMTSRQGLGVGG 150
Query: 188 GQPYIFRVGS---GQVIKGLDEGILSMKVGGLRRLYIPGPLAFPKGLTSAPGRPRVAPSS 244
G PY F VG G V+KGLD G+ M+VGG R + +P LA+ K G + P++
Sbjct: 151 GTPYGFDVGQSERGNVLKGLDLGVEGMRVGGQRLVIVPPELAYGK-----KGVQEIPPNA 205
Query: 245 PVMFDVNLLYI 255
+ D+ LL I
Sbjct: 206 TIELDIELLSI 216
>AT5G05420.1 | chr5:1604040-1604823 REVERSE LENGTH=144
Length = 143
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 7/93 (7%)
Query: 164 GFQVAANYVAMVP-NGQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKVGGLRRLYIP 222
G +V+ +Y + NG+IFDS++ K + Y FR+ +G+VIKGLD G+ M VGG R+L IP
Sbjct: 56 GKRVSVHYTGKLQGNGKIFDSTVGKSR-YKFRLDAGKVIKGLDVGLNGMLVGGKRKLTIP 114
Query: 223 GPLAFPKGLTSAPGRPRVAPSSPVMFDVNLLYI 255
+ + A G + P S ++FDV LL +
Sbjct: 115 PEMGY-----GAEGAGSIPPDSWLVFDVELLNV 142
>AT4G25340.1 | chr4:12959657-12962632 REVERSE LENGTH=478
Length = 477
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 72/124 (58%), Gaps = 8/124 (6%)
Query: 135 DLENVPMVTTESGLQYKDIKVGE--GPSPPIGFQVAANYVA-MVPNGQIFDSSLEKGQPY 191
D ++ + T +GL +++ +G+ G G V+ Y+ + NG+IFDS++ K P+
Sbjct: 358 DSKSSQVRTYPNGLIVEELSMGKPNGKRADPGKTVSVRYIGKLQKNGKIFDSNIGKS-PF 416
Query: 192 IFRVGSGQVIKGLDEGILSMKVGGLRRLYIPGPLAFPKGLTSAPGRPRVAPSSPVMFDVN 251
FR+G G VIKG D G+ M+VG R+L IP + + G+ A G ++ P+S + FDV
Sbjct: 417 KFRLGIGSVIKGWDVGVNGMRVGDKRKLTIPPSMGY--GVKGAGG--QIPPNSWLTFDVE 472
Query: 252 LLYI 255
L+ +
Sbjct: 473 LINV 476
>AT5G64350.1 | chr5:25734810-25735990 REVERSE LENGTH=113
Length = 112
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 147 GLQYKDIKVGEGPSPPIGFQVAANYVAMVPNG---QIFDSSLEKGQ-PYIFRVGSGQVIK 202
G++ + I+ G GP P G V + +G Q F S+ ++GQ P+ F++G G VIK
Sbjct: 2 GVEKQVIRPGNGPKPAPGQTVTVHCTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAVIK 61
Query: 203 GLDEGILSMKVGGLRRLYIPGPLAFPKGLTSAPGRPRVAPSSPVMFDVNLLYI 255
G DEG++ M++G + RL A+ G A G + P+S + F++ +L +
Sbjct: 62 GWDEGVIGMQIGEVARLRCSSDYAYGAGGFPAWG---IQPNSVLDFEIEVLSV 111
>AT5G13410.1 | chr5:4299830-4301706 REVERSE LENGTH=257
Length = 256
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 27/139 (19%)
Query: 144 TESGLQYKDIKVGEGPSPPIGFQVAANY--VAMVPNGQIFDS-SLEKG--------QPYI 192
T+SGLQYKD++VG GP G +V ++ + G+IF++ + KG + +
Sbjct: 115 TQSGLQYKDLRVGTGPIAKKGDKVVVDWDGYTIGYYGRIFEARNKTKGGSFEGDDKEFFK 174
Query: 193 FRVGSGQVIKGLDEGILSMKVGGLRRLYIPGPLAFPKGLTSAPG---------------- 236
F +GS +VI +E + M +GG+RR+ +P L +P + G
Sbjct: 175 FTLGSNEVIPAFEEAVSGMALGGIRRIIVPPELGYPDNDYNKSGPRPMTFSGQRALDFVL 234
Query: 237 RPRVAPSSPVMFDVNLLYI 255
R + ++FDV LL I
Sbjct: 235 RNQGLIDKTLLFDVELLKI 253
>AT3G12340.1 | chr3:3925720-3929346 REVERSE LENGTH=500
Length = 499
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 121 PEEKPKLCDAACEKDLEN---VPMVTTESGLQYKDIKVG--EGPSPPIGFQVAANYVAMV 175
PE+K + D EK+ + T +G+ +DI+ G +G S G +V+ Y +
Sbjct: 363 PEKKKQAIDKNIEKEAGTKKPLETRTLSNGVIIEDIEKGKLDGKSAVKGKKVSILYTGKL 422
Query: 176 PN-GQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKVGGLRRLYIPGPLAFPK-GLTS 233
+ G +FDS+L + P FR+G VI+GL G+ M+VG RRL IP L + K GL
Sbjct: 423 KDTGNLFDSNLGE-DPLRFRLGGENVIEGLSIGVEGMRVGDKRRLIIPPALGYSKRGL-- 479
Query: 234 APGRPRVAPSSPVMFDVNLLYI 255
+ +V S+ ++++V + I
Sbjct: 480 ---KEKVPKSAWLVYEVEAVKI 498
>AT4G19830.1 | chr4:10772579-10773933 REVERSE LENGTH=230
Length = 229
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 11/96 (11%)
Query: 135 DLENVPMVTTESGLQYKDIKVGEGPSPPIGFQVAANYVAMVP--NGQIFDSSLE------ 186
D +P G++ D+++G+G P G Q+ +Y + G FDS+ +
Sbjct: 79 DFSEIP---NSGGVKALDLRIGDGDVPIEGDQIEIHYYGRLAAKQGWRFDSTYDHKDSNG 135
Query: 187 KGQPYIFRVGSGQVIKGLDEGILSMKVGGLRRLYIP 222
+ P+ F +GS +VI G++ + SMKVGG+RR+ IP
Sbjct: 136 EAVPFTFVLGSSKVIPGIETAVRSMKVGGIRRVVIP 171
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.140 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,927,576
Number of extensions: 145987
Number of successful extensions: 237
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 235
Number of HSP's successfully gapped: 17
Length of query: 261
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 164
Effective length of database: 8,447,217
Effective search space: 1385343588
Effective search space used: 1385343588
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 110 (47.0 bits)