BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0527100 Os08g0527100|AK119411
(959 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G04860.1 | chr1:1369306-1372290 REVERSE LENGTH=962 115 2e-25
AT2G32780.1 | chr2:13898431-13901870 REVERSE LENGTH=1084 111 2e-24
AT5G46740.1 | chr5:18965410-18968492 REVERSE LENGTH=733 75 1e-13
AT4G17895.1 | chr4:9939914-9942698 FORWARD LENGTH=696 68 3e-11
AT5G57990.1 | chr5:23470218-23473997 REVERSE LENGTH=860 63 9e-10
AT3G14400.1 | chr3:4811953-4815210 REVERSE LENGTH=662 63 9e-10
AT2G24640.1 | chr2:10475613-10479341 REVERSE LENGTH=673 62 2e-09
AT4G31670.1 | chr4:15336007-15339506 REVERSE LENGTH=632 62 2e-09
AT4G24560.1 | chr4:12679493-12684528 REVERSE LENGTH=1009 59 9e-09
AT1G51710.1 | chr1:19175805-19179894 REVERSE LENGTH=483 57 5e-08
AT1G17110.2 | chr1:5845816-5849889 REVERSE LENGTH=929 57 7e-08
AT4G39370.3 | chr4:18306392-18308625 FORWARD LENGTH=506 56 1e-07
AT1G32850.1 | chr1:11902629-11906900 FORWARD LENGTH=893 56 1e-07
AT3G21280.1 | chr3:7478166-7482037 REVERSE LENGTH=533 54 5e-07
AT5G65450.1 | chr5:26157863-26161096 FORWARD LENGTH=732 53 1e-06
AT4G39910.1 | chr4:18511858-18514139 REVERSE LENGTH=372 52 2e-06
>AT1G04860.1 | chr1:1369306-1372290 REVERSE LENGTH=962
Length = 961
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 90/154 (58%), Gaps = 16/154 (10%)
Query: 819 HSADQVDAKQKERENRNQGGIQTR--------VINKLPPVLAIHLKRSKE-----TGKVR 865
HSAD+ ++K + E+ + + T +INK PPVL IHLKR + K+
Sbjct: 805 HSADESESKGTQDEDEDSEKVITVKRDATKKVLINKAPPVLTIHLKRFSQDLRGRLSKLN 864
Query: 866 GHVNFEEILDVGQFMDPSSEDKDNSSYHLVGVIEHIGPSTSSGHMVAYVRPNQ--EQPDG 923
GHV F+E++D+ Q+MD +D Y L G++EH G + GH VAYVR Q ++ D
Sbjct: 865 GHVAFKEVIDLRQYMDSRCSGEDPPVYRLAGLVEHSG-TMRGGHYVAYVRGGQRVKETDS 923
Query: 924 GTSPWYRASDTDIRQVSLEEVLKCEASLFFYERI 957
++ WY SD +RQVSLE+VL EA + FYERI
Sbjct: 924 SSTAWYNVSDAYVRQVSLEKVLHSEAYILFYERI 957
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 112/279 (40%), Gaps = 53/279 (18%)
Query: 252 IMVCTGCNKHFCTRAEAKKKPHGHARLHARKFEHHWVGLWYSDPYKGYCFKCEFDLTLSA 311
I +C C + C P H H+R H V W +P +CF C+ L
Sbjct: 110 IWLCLECGCYVCGGVGLPNGPQSHVLRHSRVTRHRLVIQW-ENPQLRWCFPCQLLL---- 164
Query: 312 PTVEQGMVFGKELFGQESGLVKGH------------------------------------ 335
P ++ K++ + L+KG
Sbjct: 165 PVEKEDNGEKKDVLSEVVKLIKGRSLNNLASSDIEDQCSGSGSITSDIKLEGAVTSDIEA 224
Query: 336 --GCVIRGMPNLGNTCYINALLQCLFVLGKLRARMLAPDAPSY--ILGYELKELFQEVNN 391
G V+RG+ NLGNTC+ N+++Q L L +LR L + L L++LF E
Sbjct: 225 RDGYVVRGLVNLGNTCFFNSIMQNLLSLDRLRDHFLKENGSGVGGPLASSLRKLFTETKP 284
Query: 392 VDNAQLQLNPTKFFACIRVLDARFISSDMQDSHELLCFLLNELDKEEKSMVPP------- 444
+ +NP FF +F D DSHELL LL+ L EE ++
Sbjct: 285 EAGLKSVINPRAFFGSFCSKAPQFRGYDQHDSHELLRCLLDSLSTEESALRKKRGVSDND 344
Query: 445 -VSPTVVDSIFRVQLSATISCSHCSYNSVSHEVMYELSV 482
S T+++S+F + S+ +SC C ++S +E +LS+
Sbjct: 345 EKSTTLIESVFGGETSSIVSCMECGHSSKVYEPFLDLSL 383
>AT2G32780.1 | chr2:13898431-13901870 REVERSE LENGTH=1084
Length = 1083
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 94/157 (59%), Gaps = 22/157 (14%)
Query: 812 WKQVKVDHSADQVDAKQKERENRNQGGIQTRVINKLPPVLAIHLKRSKE-----TGKVRG 866
W+ + VD +++V K+ R + +INK PPVL IHLKR + K+ G
Sbjct: 938 WEDLAVD--SEEVIVKRDAR--------KKVLINKAPPVLTIHLKRFSQDARGRVSKLSG 987
Query: 867 HVNFEEILDVGQFMDPSSEDKDNSSYHLVGVIEHIGPSTSSGHMVAYVR-PNQEQPDGGT 925
HV+F+E +D+ ++MD ++D Y L G++EH+G + S GH V+Y+R ++E+ D T
Sbjct: 988 HVDFQEFIDLSKYMDTRCSEEDEPVYRLAGLVEHLG-AMSRGHYVSYIRGGHKERRDSDT 1046
Query: 926 -----SPWYRASDTDIRQVSLEEVLKCEASLFFYERI 957
S WY ASD+ +R SLEEVL+ EA + FYERI
Sbjct: 1047 KEPNSSIWYHASDSQVRPASLEEVLRSEAYILFYERI 1083
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 125/285 (43%), Gaps = 44/285 (15%)
Query: 248 GRTRIMVCTGCNKHFCTRAEAKKKPHGHARLHARKFEHHWVGLWYSDPYKGYCFKCEF-- 305
R I +C C + C + H H R H V + +P +CF C+
Sbjct: 88 ARNAIWLCLECGYYVCGDVGLPTEAQSHVMGHNRLTRHRLV-IQCKNPQLRWCFSCQSLL 146
Query: 306 -----------DLTLS-------------APTVEQGMVFGKELFGQESGLVKGHGCVIRG 341
DL L + + E ++G G+ G +RG
Sbjct: 147 PFDNEENGEKKDLLLEVVKLIRERSPNTYSASFETEFSCSGSIYG---GIEARDGYAVRG 203
Query: 342 MPNLGNTCYINALLQCLFVLGKLRARMLAPD-APSYILGYELKELFQEVNNVDNA-QLQL 399
+ NLGNTC+ N+++Q L L +LR L D + S L LKELF E N+ + + ++
Sbjct: 204 LVNLGNTCFFNSVMQNLLSLDQLREHFLKEDLSVSGPLVSSLKELFAESNSEASVFRNEI 263
Query: 400 NPTKFFACIRVLDARFISSDMQDSHELLCFLLNELDKEEKSMVPPVS------------P 447
NP F + +F DSHELL LL+ L EE S+ + P
Sbjct: 264 NPRDLFFSVCSQAPQFRGYQQHDSHELLRCLLDGLSIEESSLRKKLGVSDSNDSSTYQKP 323
Query: 448 TVVDSIFRVQLSATISCSHCSYNSVSHEVMYELSVPLPSERPPPK 492
T++DS+F ++S+T+SC C + S +E +LS+P+PS + PPK
Sbjct: 324 TLIDSVFGGEISSTVSCLECGHFSKVYEPFMDLSLPVPSMKLPPK 368
>AT5G46740.1 | chr5:18965410-18968492 REVERSE LENGTH=733
Length = 732
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 844 INKLPPVLAIHLKRSKETG----KVRGHVNFEEILDVGQFMDPSSEDKDNSSYHLVGVIE 899
+KLPPV HLKR G K+ H+ F LD+ FM + + + ++ YHL +E
Sbjct: 359 FDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFMSSNHDPEVSTRYHLYAFVE 418
Query: 900 HIGPSTSSGHMVAYVRPNQEQPDGGTSPWYRASDTDIRQVSLEEVLKCEASLFFYERIG 958
HIG + GH +YVR E W+ D+ + ++S E VL A + FY R G
Sbjct: 419 HIGIRATFGHYSSYVRSAPET-------WHNFDDSKVTRISEERVLSRPAYILFYAREG 470
>AT4G17895.1 | chr4:9939914-9942698 FORWARD LENGTH=696
Length = 695
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 779 ERVQEAVSSCLPAEEPDDLLSGQENTSSLDQGKWKQVKVDHSADQVDAKQKERENRNQGG 838
E +++V L E+ D L S E+ + +++ +Q+ D+ ++V +K+K+
Sbjct: 314 ETYEKSVGLSLEIEDVDTLGSALESFTRVEKLD-EQLTCDNCNEKV-SKEKQL------- 364
Query: 839 IQTRVINKLPPVLAIHLKRSKETG----KVRGHVNFEEILDVGQFMDPSSEDKDNSSYHL 894
+++KLP V HLKR K G K+ HV +D+ +M E++ ++ YHL
Sbjct: 365 ----LLDKLPLVATFHLKRFKNNGLYMEKIYKHVKIPLEIDLQPYMRNIQENEVSTKYHL 420
Query: 895 VGVIEHIGPSTSSGHMVAYVRPNQEQPDGGTSPWYRASDTDIRQVSLEEVLKCEASLFFY 954
++EH G S + GH +YVR W+ D+ + ++ + VL ++ + FY
Sbjct: 421 YALVEHFGYSVAYGHYSSYVR-------SAPKIWHHFDDSKVTRIDEDMVLSQDSYILFY 473
Query: 955 ERIG 958
R G
Sbjct: 474 AREG 477
>AT5G57990.1 | chr5:23470218-23473997 REVERSE LENGTH=860
Length = 859
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 843 VINKLPPVLAIHLKR--SKETGKVRGHVNFEEILDVGQFMDPSSEDKDNSSYHLVGVIEH 900
++K P VL +HLKR + + K+ V+F +D+ F+ S + N Y L GV+ H
Sbjct: 303 TVSKAPYVLTVHLKRFEAHRSEKIDRKVDFTSAIDMKPFV--SGPHEGNLKYTLYGVLVH 360
Query: 901 IGPSTSSGHMVAYVRPNQEQPDGGTSPWYRASDTDIRQVSLEEVLKCEASLFFYER 956
G S+ SGH +VR + + WY D + QVS + V +A + FY R
Sbjct: 361 YGRSSHSGHYACFVRTS-------SGMWYSLDDNRVVQVSEKTVFNQKAYMLFYVR 409
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 16/157 (10%)
Query: 341 GMPNLGNTCYINALLQCLFVLGKLRARMLAPDAPSY--ILGY-ELKELFQEVNNVDNAQL 397
G+ NLGNTC++N++LQCL L A + Y + G+ L + + V A
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHVRTARQANG 167
Query: 398 Q-LNPTKFFACIRVLDARFISSDMQDSHELLCFLLNELDKEEKSMVPPVSP--------- 447
+ L P + +R + F + +D+HE +++N L+ K +P P
Sbjct: 168 RILAPKDLVSNLRCISRNFRNCRQEDAHE---YMINLLECMHKCSLPSGVPSESSDAYRR 224
Query: 448 TVVDSIFRVQLSATISCSHCSYNSVSHEVMYELSVPL 484
++V IF L + + C CS+ S + +LS+ +
Sbjct: 225 SLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI 261
>AT3G14400.1 | chr3:4811953-4815210 REVERSE LENGTH=662
Length = 661
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 844 INKLPPVLAIHLKRSKET--GKVRGHVNFEEILDVGQFMDPSSEDKDNSSYHLVGVIEHI 901
I + P +L I LKR GK+ ++F EIL + FM +S+D Y L G+I H
Sbjct: 228 ILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSKASKDPQ-PEYKLFGIIVHS 286
Query: 902 GPSTSSGHMVAYVRPNQEQPDGGTSPWYRASDTDIRQVSLEEVLKCEASLFFYER 956
G S SGH AYV+ + + WY +D+ + +L+EVL +A + F+ R
Sbjct: 287 GFSPESGHYYAYVKDSLGR-------WYCCNDSFVSLSTLQEVLSEKAYILFFSR 334
>AT2G24640.1 | chr2:10475613-10479341 REVERSE LENGTH=673
Length = 672
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 848 PPVLAIHLKRSK--ETGKVRGHVNFEEILDVGQFMDPSSEDKDNSSYHLVGVIEHIGPST 905
P +L I LKR + GK+ ++F E D+G +M E D Y L VI H+
Sbjct: 376 PNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSGGGEGSD--VYKLYAVIVHLDMLN 433
Query: 906 SS--GHMVAYVRPNQEQPDGGTSPWYRASDTDIRQVSLEEVLKCEASLFFYERI 957
+S GH + YV+ + WYR D+++ +V LE+VL A + Y R+
Sbjct: 434 ASFFGHYICYVKDFR-------GNWYRIDDSEVEKVELEDVLSQRAYMLLYSRV 480
>AT4G31670.1 | chr4:15336007-15339506 REVERSE LENGTH=632
Length = 631
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Query: 843 VINKLPPVLAIHLKRSK--ETGKVRGHVNFEEILDVGQFMDPSSEDKDNSSYHLVGVIEH 900
I + P +L I LKR + GK+ ++F E LD+ +M + D Y L VI H
Sbjct: 365 TIRRAPNILTIALKRYQGGRYGKLNKRISFPETLDLNPYMSEGGDGSD--VYKLYAVIVH 422
Query: 901 IGPSTSS--GHMVAYVRPNQEQPDGGTSPWYRASDTDIRQVSLEEVLKCEASLFFYERI 957
+ +S GH + Y++ WYR D++I V LE+VL A + Y RI
Sbjct: 423 LDMLNASFFGHYICYIKD-------FCGNWYRIDDSEIESVELEDVLSQRAYMLLYSRI 474
>AT4G24560.1 | chr4:12679493-12684528 REVERSE LENGTH=1009
Length = 1008
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 844 INKLPPVLAIHLKR--SKETGKVRGHVNFEEILDVGQFMDPSSEDKDNSSYHLVGVIEHI 901
I + P VL I LKR + + GK+ + F E LD+ ++ SE + Y L GVI H+
Sbjct: 740 ITEPPNVLTIALKRFQAGKFGKLNKLIRFPETLDLAPYVSGGSEKSHD--YKLYGVIVHL 797
Query: 902 GPSTS--SGHMVAYVRPNQEQPDGGTSPWYRASDTDIRQVSLEEVLKCEASLFFYER 956
+ SGH V Y+R NQ + WY+A D+ + +E +L A + FY R
Sbjct: 798 DVMNAAFSGHYVCYIR-NQNK-------WYKADDSTVVTSDVERILTKGAYMLFYAR 846
>AT1G51710.1 | chr1:19175805-19179894 REVERSE LENGTH=483
Length = 482
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 306 DLTLSAPTVEQGMVFGKELFGQESGLVKGHGCVIRGMPNLGNTCYINALLQCLFVLGKLR 365
D + AP E+ +VF ++L E L G G+ NLGNTCY+N+ +QCL + +L+
Sbjct: 75 DEIVKAP--EKAIVFAEDL--PEEALATNLGYSA-GLVNLGNTCYMNSTVQCLKSVPELK 129
Query: 366 ---------ARMLAPDAPSYILGYELKELFQEVNNVDNAQLQLNPTKFFACIRVLDARF- 415
AR D S++L +ELF E++ NA ++P++F+ +R +F
Sbjct: 130 SALSNYSLAARSNDVDQTSHMLTVATRELFGELDRSVNA---VSPSQFWMVLRKKYPQFS 186
Query: 416 -ISSDM---QDSHELLCFLLNELDKEEKSMVPPVSPTVVDSIFRVQLSATISC 464
+ + M QD+ E LL L + K+ V ++F V L + + C
Sbjct: 187 QLQNGMHMQQDAEECWTQLLYTLSQSLKAPTSSEGADAVKALFGVNLQSRLHC 239
>AT1G17110.2 | chr1:5845816-5849889 REVERSE LENGTH=929
Length = 928
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 16/142 (11%)
Query: 822 DQVDAKQKERENRNQGGIQTR---VINKLPPVLAIHLKRSKE--TGKVRGHVNFEEILDV 876
+ +D + R +R G ++ R I++ P +L I LKR +E GK+ ++F E+LD+
Sbjct: 615 EDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDM 674
Query: 877 GQFMDPSSEDKDNSSYHLVGVIEHIGP--STSSGHMVAYVRPNQEQPDGGTSPWYRASDT 934
FM + + Y L VI H+ ++ SGH ++YV+ + WYR D+
Sbjct: 675 IPFMTRTGDVP--PLYMLYAVIVHLDTLNASFSGHYISYVKDLRGN-------WYRIDDS 725
Query: 935 DIRQVSLEEVLKCEASLFFYER 956
+I V + +V+ A + FY R
Sbjct: 726 EIHPVPMTQVMSEGAYMLFYMR 747
>AT4G39370.3 | chr4:18306392-18308625 FORWARD LENGTH=506
Length = 505
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 40/158 (25%)
Query: 839 IQTRVINKLPPVLAIHLK---------------RSKETGKVRGHVNFEEILDVGQF---- 879
++ +I + P V A LK E K+ GH+ F +L++ F
Sbjct: 349 LKQLIIARFPKVFAYSLKLDVKLLCIQVQRASFNMFEEFKLSGHIAFPLVLNLSLFTPSS 408
Query: 880 --------MDPSSE------DKDNSSYHLVGVIEHIGPSTSSGHMVAY--VRPNQEQPDG 923
++ SSE K++ Y LV V+EH G T SGH Y VR ++ +
Sbjct: 409 IGVNIEERIEMSSEYQKPEASKNHGMYRLVTVVEHFG-RTGSGHYTVYRSVRVFSQEEEE 467
Query: 924 GTS----PWYRASDTDIRQVSLEEVLKCEASLFFYERI 957
W+ SD+++ +VS +VL EASL FYER+
Sbjct: 468 EDCDEDLSWFSISDSEVCRVSESDVLGAEASLLFYERL 505
>AT1G32850.1 | chr1:11902629-11906900 FORWARD LENGTH=893
Length = 892
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 95/240 (39%), Gaps = 58/240 (24%)
Query: 319 VFGKELFGQESG---LVKGHGCVIRGMPNLGNTCYINALLQCL--------FVLGKLRAR 367
FG+ F + KG + G+ NLGNTC++N+ LQCL + L R+
Sbjct: 277 FFGRNTFKDDVSSRTFGKGEKRGLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSD 336
Query: 368 MLA--PDAPSYILGYELKELFQEVNNVDNAQLQLNPTKFFACIRVLDARFISSDMQDSHE 425
+ A P L EL +++ + Q + P F + +F + DS E
Sbjct: 337 INAKNPLGMRGELAIAFGELLRKL--WSSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQE 394
Query: 426 LLCFLLN--------------------------ELDKEEKSMVPPVSPTVVDSIFRVQLS 459
+L FLL+ E+ +E+ + +V+ +F+ Q
Sbjct: 395 MLAFLLDGLHEDLNKVKRKPYIEAKDSDGRPDDEVAEEKWKYHKARNDSVIVDVFQGQYK 454
Query: 460 ATISCSHCSYNSVSHEVMYELSVPLPSER----------------PPPKSIASPPRDISC 503
+T+ C C S++ + LS+PLPS R P P ++ + P+D SC
Sbjct: 455 STLVCPDCGKISITFDPFMYLSLPLPSSRTRSMTVTVFYGDGSHLPMPYTV-TVPKDGSC 513
>AT3G21280.1 | chr3:7478166-7482037 REVERSE LENGTH=533
Length = 532
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 306 DLTLSAPTVEQGMVFGKELFGQESGLVKGHGCVIRGMPNLGNTCYINALLQCLFVLGKLR 365
D + AP E+G VF ++L ++ G+ G+ NLGNTCY+N+ +QCL + +L+
Sbjct: 130 DEIVKAP--EKGPVFMEDLPEEQQAANLGYSA---GLVNLGNTCYMNSTMQCLISVPELK 184
Query: 366 --------ARMLAPDAPSYILGYELKELFQEVNNVDNAQLQLNPTKFFACIRVLDARFI- 416
AR D S++L +ELF E++ A + P F+ ++ +F
Sbjct: 185 SELSNYQSARTKDVDQTSHMLTVATRELFSELDKSVKA---VAPMPFWMVLQKKYPQFAQ 241
Query: 417 ----SSDMQDSHELLCFLLNELDKEEKSMVPPVSPTVVDSIFRVQLSATISC 464
+ QD+ E +L L + K P P V ++F + L + C
Sbjct: 242 LHNGNHMQQDAEECWTQMLYTLSQSLKLPSPSEDPDAVKALFGLNLLNRLHC 293
>AT5G65450.1 | chr5:26157863-26161096 FORWARD LENGTH=732
Length = 731
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 14/114 (12%)
Query: 848 PPVLAIHLKR--SKETGKVRGHVNFEEILDVGQFM-DPSSEDKDNSSYHLVGVIEHIGPS 904
P +L + LKR S GK+ ++F E+LD+ +M DP+ D+ Y L V+ H+
Sbjct: 528 PNILTVVLKRFQSDNFGKLSKPIHFPELLDISPYMSDPNH--GDHPVYSLYAVVVHLDAM 585
Query: 905 TS--SGHMVAYVRPNQEQPDGGTSPWYRASDTDIRQVSLEEVLKCEASLFFYER 956
++ SGH V Y++ DG W++ D+++ V LE VL A + Y R
Sbjct: 586 STLFSGHYVCYIK----TLDGD---WFKIDDSNVFPVQLETVLLEGAYMLLYAR 632
>AT4G39910.1 | chr4:18511858-18514139 REVERSE LENGTH=372
Length = 371
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 341 GMPNLGNTCYINALLQCLFVLGKLRARML--------APDAPSYILGYELKELFQEVNNV 392
G N GNTCY N++LQ L+ R ++L DA ++ L +LF ++++
Sbjct: 24 GFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLMTC-LADLFSQISSQ 82
Query: 393 DNAQLQLNPTKFFACIRVLDARFISSDMQDSHELLCFLLNE----LDKEEKS 440
+ P +F ++ + F S QD+HE L +LLNE L+KE K+
Sbjct: 83 KKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAKA 134
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.131 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 22,081,120
Number of extensions: 998107
Number of successful extensions: 2568
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 2564
Number of HSP's successfully gapped: 20
Length of query: 959
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 851
Effective length of database: 8,145,641
Effective search space: 6931940491
Effective search space used: 6931940491
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 117 (49.7 bits)