BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0526300 Os08g0526300|AK070382
         (329 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G22890.1  | chr4:12007157-12009175 FORWARD LENGTH=325          392   e-109
AT4G11960.1  | chr4:7175340-7177709 REVERSE LENGTH=314            379   e-105
AT5G59400.2  | chr5:23957756-23959518 FORWARD LENGTH=302           54   9e-08

>AT4G22890.1 | chr4:12007157-12009175 FORWARD LENGTH=325
          Length = 324

 Score =  392 bits (1006), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 182/249 (73%), Positives = 210/249 (84%)

Query: 81  SNVLPYCSINRKEKKTIGEMEQEFLQALQAFYYDKKAVMSNEEFDNLKEELMWEGSSVVM 140
           SNVLPYCSIN+ EKKTIGEMEQEFLQALQ+FYYD KA+MSNEEFDNLKEELMWEGSSVVM
Sbjct: 76  SNVLPYCSINKAEKKTIGEMEQEFLQALQSFYYDGKAIMSNEEFDNLKEELMWEGSSVVM 135

Query: 141 LSPDEQRLLEASMAYVAGNPIMTDAEFDELKLRLRKEGSEIVQEGPRCSLRSRKVYSDLT 200
           LS DEQR LEASMAYV+GNPI+ D E+D+LKL+L+ +GS+IV EGPRCSLRS+KVYSDL 
Sbjct: 136 LSSDEQRFLEASMAYVSGNPILNDEEYDKLKLKLKIDGSDIVSEGPRCSLRSKKVYSDLA 195

Query: 201 VDYFKMFLLNVPXXXXXXXXXXXXXXXXGFEITYLLELPEPFSFIFTWFAALPLIFWVAQ 260
           VDYFKM LLNVP                GFEITY++ELPEP+SFIFTWFAA+P+I ++A 
Sbjct: 196 VDYFKMLLLNVPATVVALGLFFFLDDITGFEITYIMELPEPYSFIFTWFAAVPVIVYLAL 255

Query: 261 AITSAIVKDFLILKGPCPNCGNENLSFFGTILSVPSGGARNSVKCANCSSSLVYDSASRL 320
           +IT  I+KDFLILKGPCPNCG EN SFFGTILS+ SGG  N+VKC NC +++VYDS SRL
Sbjct: 256 SITKLIIKDFLILKGPCPNCGTENTSFFGTILSISSGGKTNTVKCTNCGTAMVYDSGSRL 315

Query: 321 ITLPETAEA 329
           ITLPE ++A
Sbjct: 316 ITLPEGSQA 324



>AT4G11960.1 | chr4:7175340-7177709 REVERSE LENGTH=314
          Length = 313

 Score =  379 bits (972), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 176/249 (70%), Positives = 208/249 (83%)

Query: 81  SNVLPYCSINRKEKKTIGEMEQEFLQALQAFYYDKKAVMSNEEFDNLKEELMWEGSSVVM 140
           S +LPYCSIN+ EK+TIGEMEQEFLQA+Q+FYY+ KA+MSNEEFDNLKEELMWEGSSVVM
Sbjct: 65  SKILPYCSINKNEKRTIGEMEQEFLQAMQSFYYEGKAIMSNEEFDNLKEELMWEGSSVVM 124

Query: 141 LSPDEQRLLEASMAYVAGNPIMTDAEFDELKLRLRKEGSEIVQEGPRCSLRSRKVYSDLT 200
           LS DEQR LEASMAYV+GNPI++D E+D+LK++L+ +GSEIV EGPRCSLRS+KVYSDL 
Sbjct: 125 LSSDEQRFLEASMAYVSGNPILSDEEYDKLKMKLKMDGSEIVCEGPRCSLRSKKVYSDLA 184

Query: 201 VDYFKMFLLNVPXXXXXXXXXXXXXXXXGFEITYLLELPEPFSFIFTWFAALPLIFWVAQ 260
           +DYFKMFLLNVP                GFEITYLLELPEPFSFIFTWFAA+P I ++A 
Sbjct: 185 IDYFKMFLLNVPATVVALGLFFFLDDITGFEITYLLELPEPFSFIFTWFAAVPAIVYLAL 244

Query: 261 AITSAIVKDFLILKGPCPNCGNENLSFFGTILSVPSGGARNSVKCANCSSSLVYDSASRL 320
           ++T  I+KDFLILKGPCPNCG EN+SFFGTILS+P+    N+VKC+ C + +VYDS SRL
Sbjct: 245 SLTKLILKDFLILKGPCPNCGTENVSFFGTILSIPNDSNTNNVKCSGCGTEMVYDSGSRL 304

Query: 321 ITLPETAEA 329
           ITLPE  +A
Sbjct: 305 ITLPEGGKA 313



>AT5G59400.2 | chr5:23957756-23959518 FORWARD LENGTH=302
          Length = 301

 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 84/225 (37%), Gaps = 41/225 (18%)

Query: 134 EGSSVVMLSP-DEQR-------LLEASMAYVAGNPIMTDAEFDELKLRLRKEGSEIVQEG 185
           EG S + + P D  R         +A  AY  G P++ D  FD ++L+LR  GS+ V + 
Sbjct: 56  EGPSCIFVGPIDSARKETLEALYRQAKDAYYNGKPLIVDDMFDRVELKLRWYGSKSVVKY 115

Query: 186 PRCSLRSRKVYSDLTVDYFKMFLLN---------------VPXXXXXXXXXXXXXXXXGF 230
           PRCSL  +  Y+D   D  ++ LL                +P                G 
Sbjct: 116 PRCSLLRQSTYADAEDDASQVLLLATVWIMIFLFGSSACVLPTIYGVGLVYGGDPFDSGL 175

Query: 231 EITYLLELPEPFSFIFTWFAALPLIFWVAQAITSAIVK--------DFLILKGPCPNCGN 282
             +  L    P    F       L       I S+ V+        D   LKG CPNCG 
Sbjct: 176 VYSSQLSSSVPILSKFNGILLSVLGPAFGYPIASSAVRVLKGLWRNDLTALKGDCPNCGE 235

Query: 283 ENLSFFGTILSVPSGGARNSVKCANCSSSL-------VYDSASRL 320
           E  +F   + S  S  + +   C  C  +L       V  SASRL
Sbjct: 236 EVFAF---VRSDQSNRSAHKADCHVCECTLEFRTKVEVDKSASRL 277



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.135    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,758,149
Number of extensions: 204672
Number of successful extensions: 543
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 537
Number of HSP's successfully gapped: 3
Length of query: 329
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 230
Effective length of database: 8,392,385
Effective search space: 1930248550
Effective search space used: 1930248550
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)