BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0522500 Os08g0522500|AK106190
(316 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G05850.1 | chr1:1766833-1768117 REVERSE LENGTH=322 424 e-119
AT3G16920.1 | chr3:5776663-5777886 REVERSE LENGTH=349 390 e-109
AT3G12500.1 | chr3:3962501-3963984 REVERSE LENGTH=336 210 8e-55
AT4G01700.1 | chr4:732413-733487 REVERSE LENGTH=281 188 3e-48
AT1G02360.1 | chr1:472138-473116 REVERSE LENGTH=273 187 6e-48
AT2G43570.1 | chr2:18076389-18077435 REVERSE LENGTH=278 105 4e-23
AT2G43590.1 | chr2:18081592-18082749 REVERSE LENGTH=265 98 5e-21
AT3G54420.1 | chr3:20145935-20147034 FORWARD LENGTH=274 94 1e-19
AT2G43580.1 | chr2:18078817-18080013 REVERSE LENGTH=266 89 3e-18
AT2G43610.1 | chr2:18088058-18089184 REVERSE LENGTH=282 84 1e-16
AT2G43620.1 | chr2:18093954-18095025 REVERSE LENGTH=284 81 7e-16
AT2G43600.1 | chr2:18086049-18087018 REVERSE LENGTH=274 77 8e-15
AT1G56680.1 | chr1:21250428-21251417 REVERSE LENGTH=281 72 5e-13
>AT1G05850.1 | chr1:1766833-1768117 REVERSE LENGTH=322
Length = 321
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 197/276 (71%), Positives = 229/276 (82%), Gaps = 5/276 (1%)
Query: 40 KACDKGWECSG-SRFCCNDTITDYFKAYQFEELFAHRNDRSLAHAAGFWDYHAFITAAAL 98
K C +GWECS S++CCN TI+DYF+ YQFE+LF+ RN +AHA GFWDY +FITAAAL
Sbjct: 40 KVCTQGWECSWWSKYCCNQTISDYFQVYQFEQLFSKRNT-PIAHAVGFWDYQSFITAAAL 98
Query: 99 FEPRGFGTTGGKEVGMKEVAAFLGHVGAKTSCGYSVATGGPLAWGLCYNHELSPSQSYCD 158
FEP GFGTTGGK +G KE+AAFLGHV +KTSCGY VATGGPLAWGLCYN E+SP QSYCD
Sbjct: 99 FEPLGFGTTGGKLMGQKEMAAFLGHVASKTSCGYGVATGGPLAWGLCYNREMSPMQSYCD 158
Query: 159 NSNEL-YPCVEGVEYYGRGALPVYWNYNYGIIGQGIKQDLLNHPELLEQNATLAFEAAIW 217
S + YPC G EYYGRGALP+YWN+NYG G+ +K DLLNHPE +EQNATLAF+AAIW
Sbjct: 159 ESWKFKYPCSPGAEYYGRGALPIYWNFNYGAAGEALKADLLNHPEYIEQNATLAFQAAIW 218
Query: 218 RWMTPMKRKQPSAHDVFVGNWKPTKNDTLSKRYPGFGATMNILYGDLICGQGSIDKMNVI 277
RWMTP+KR QPSAHD+FVGNWKPTKNDTLSKR P FG+TMN+LYG+ CGQGSID MN I
Sbjct: 219 RWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLYGEYTCGQGSIDPMNNI 278
Query: 278 VSHYQHYLDLMGVGSDKAG--DNLDCADQVAFNPSS 311
+SHY ++LDLMG+G + AG D L CA+Q FNPS+
Sbjct: 279 ISHYLYFLDLMGIGREDAGPNDELSCAEQKPFNPST 314
>AT3G16920.1 | chr3:5776663-5777886 REVERSE LENGTH=349
Length = 348
Score = 390 bits (1001), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/273 (69%), Positives = 217/273 (79%), Gaps = 6/273 (2%)
Query: 40 KACDKGWECSG-SRFCCNDTITDYFKAYQFEELFAHRNDRSLAHAAGFWDYHAFITAAAL 98
K CDKGWEC G S +CCN TI+D+F+ YQFE LF+ RN +AHA GFWDY +FITAAA
Sbjct: 63 KLCDKGWECKGWSEYCCNHTISDFFETYQFENLFSKRNS-PVAHAVGFWDYRSFITAAAE 121
Query: 99 FEPRGFGTTGGKEVGMKEVAAFLGHVGAKTSCGYSVATGGPLAWGLCYNHELSPSQSYCD 158
++P GFGT G K GMKEVAAFLGHVG+KTSCGY VATGGPLAWGLCYN E+SP Q YCD
Sbjct: 122 YQPLGFGTAGEKLQGMKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPDQLYCD 181
Query: 159 NSNEL-YPCVEGVEYYGRGALPVYWNYNYGIIGQGIKQDLLNHPELLEQNATLAFEAAIW 217
+ +L YPC GV Y+GRGALPVYWNYNYG G+ +K DLL+HPE LE NATLAF+AAIW
Sbjct: 182 DYYKLTYPCTPGVSYHGRGALPVYWNYNYGQTGEALKVDLLSHPEYLENNATLAFQAAIW 241
Query: 218 RWMTPMKRKQPSAHDVFVGNWKPTKNDTLSKRYPGFGATMNILYGDLICGQG-SIDKMNV 276
RWMTP K+ PSAHDVFVG WKPTKNDT +KR PGFGAT+N+LYGD IC G D+MN
Sbjct: 242 RWMTPPKKHLPSAHDVFVGKWKPTKNDTAAKRTPGFGATINVLYGDQICNSGFDNDEMNN 301
Query: 277 IVSHYQHYLDLMGVGSDKAG--DNLDCADQVAF 307
IVSHY +YLDL+GVG ++AG + L CADQ F
Sbjct: 302 IVSHYLYYLDLIGVGREEAGPHEKLSCADQEPF 334
>AT3G12500.1 | chr3:3962501-3963984 REVERSE LENGTH=336
Length = 335
Score = 210 bits (535), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 107/249 (42%), Positives = 149/249 (59%), Gaps = 8/249 (3%)
Query: 59 ITDYFKAYQFEELFAHRNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVA 118
++ + QF+++ HRND + A GF+ Y+AFITAA F GFGTTG KEVA
Sbjct: 86 LSGIISSSQFDDMLKHRNDAACP-ARGFYTYNAFITAAKSFP--GFGTTGDTATRKKEVA 142
Query: 119 AFLGHVGAKTSCGYSVATGGPLAWGLCYNHELSPSQSYCDNSNELYPCVEGVEYYGRGAL 178
AF G +T+ G++ A GP +WG C+ E +P+ YC+ S +PC G YYGRG +
Sbjct: 143 AFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPS-ATWPCASGKRYYGRGPM 201
Query: 179 PVYWNYNYGIIGQGIKQDLLNHPELLEQNATLAFEAAIWRWMTPMKRKQPSAHDVFVGNW 238
+ WNYNYG+ G+ I DLLN+P+L+ +A +AF+AAIW WMT K PS H V G W
Sbjct: 202 QLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPK-PSCHAVIAGQW 260
Query: 239 KPTKNDTLSKRYPGFGATMNILYGDLICGQGSIDKMNVIVSHYQHYLDLMGVGSDKAGDN 298
+P+ D + R PG+G NI+ G L CG+G ++ + YQ Y ++ GV G N
Sbjct: 261 QPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGV---NPGGN 317
Query: 299 LDCADQVAF 307
LDC +Q +F
Sbjct: 318 LDCYNQRSF 326
>AT4G01700.1 | chr4:732413-733487 REVERSE LENGTH=281
Length = 280
Score = 188 bits (477), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 142/241 (58%), Gaps = 7/241 (2%)
Query: 68 FEELFAHRNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFLGHVGAK 127
++++F H+ D + A GF+ Y AF+ A F P+ FG+ G +EVAAFL + +
Sbjct: 47 YDQIFIHK-DNNACPAKGFYPYEAFVEATRSF-PK-FGSVGNFWTRRREVAAFLAQISHE 103
Query: 128 TSCGYSVATGGPLAWGLCYNHELSPSQSYCDNSNELYPCVEGVEYYGRGALPVYWNYNYG 187
T+ G++ A GP AWGLC+ E+SP +YCD SN+ +PCV G Y GRG + + WNYNYG
Sbjct: 104 TTGGWATAPDGPYAWGLCFKEEVSPQSNYCDASNKDWPCVSGKSYKGRGPIQLSWNYNYG 163
Query: 188 IIGQGIKQDLLNHPELLEQNATLAFEAAIWRWMTPMKRKQPSAHDVFVGNWKPTKNDTLS 247
G+ + D L +PEL+ N+ LAF+ A+W WMT K PS H+V V ++PTK D +
Sbjct: 164 QAGRALGFDGLQNPELVANNSVLAFKTALWFWMTEQTPK-PSCHNVMVNRYRPTKADRAA 222
Query: 248 KRYPGFGATMNILYGDLICGQGSIDKMNVIVSHYQHYLDLMGVGSDKAGDNLDCADQVAF 307
R G+G NI+ G L CG ++ V ++Q Y L V + G NLDC +Q F
Sbjct: 223 NRTVGYGLVTNIINGGLECGIPGDGRVTDRVGYFQRYAQLFKVTT---GPNLDCENQRPF 279
Query: 308 N 308
+
Sbjct: 280 S 280
>AT1G02360.1 | chr1:472138-473116 REVERSE LENGTH=273
Length = 272
Score = 187 bits (475), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 137/237 (57%), Gaps = 7/237 (2%)
Query: 68 FEELFAHRNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFLGHVGAK 127
+ ++F H+ D + A GF+ Y +F+ A F PR FG+ G EVAAFL + +
Sbjct: 39 YNKIFIHK-DNTACPANGFYTYESFVQATRRF-PR-FGSVGSPVTQRLEVAAFLAQISHE 95
Query: 128 TSCGYSVATGGPLAWGLCYNHELSPSQSYCDNSNELYPCVEGVEYYGRGALPVYWNYNYG 187
T+ G++ A GP AWGLC+ E+SP +YCD+S+ +PC Y GRG + + WNYNYG
Sbjct: 96 TTGGWATAPDGPYAWGLCFKEEVSPQSTYCDSSDTQWPCFPNKTYQGRGPIQLSWNYNYG 155
Query: 188 IIGQGIKQDLLNHPELLEQNATLAFEAAIWRWMTPMKRKQPSAHDVFVGNWKPTKNDTLS 247
G+ + D L +PE + N+ +AF+ A+W WMTP K PS HDV +G ++PT D +
Sbjct: 156 PAGRALGFDGLRNPETVSNNSVIAFQTALWFWMTPQSPK-PSCHDVMIGKYRPTAADLAA 214
Query: 248 KRYPGFGATMNILYGDLICGQGSIDKMNVIVSHYQHYLDLMGVGSDKAGDNLDCADQ 304
R GFG T NI+ G L CG ++N + +Q Y L V + G NLDC +Q
Sbjct: 215 NRTGGFGLTTNIINGGLECGIPGDGRVNDRIGFFQRYTGLFKVAT---GPNLDCENQ 268
>AT2G43570.1 | chr2:18076389-18077435 REVERSE LENGTH=278
Length = 277
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 102/231 (44%), Gaps = 49/231 (21%)
Query: 76 NDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFLGHVGAKTSCGYSVA 135
N R GF+ + F+ AA + + G + +E+AAF HV +T G+
Sbjct: 91 NQRGDCPGKGFYTHDTFMAAANSYP------SFGASISKREIAAFFAHVAQET--GF--- 139
Query: 136 TGGPLAWGLCYNHEL-----SPSQSYCDNSNELYPCVEGVEYYGRGALPVYWNYNYGIIG 190
+CY E+ + S YCD +PC +G YYGRGA+ + WNYNYG+ G
Sbjct: 140 --------MCYIEEIDGPAKAASGEYCDTEKPEFPCAQGKGYYGRGAIQLSWNYNYGLCG 191
Query: 191 QGIKQDLLNHPELLEQNATLAFEAAIWRWMTPMKRKQPSAHDVFVGNWKPTKNDTLSKRY 250
+ + ++LL PE + Q+ LAF+ A W W T ++ S
Sbjct: 192 KALDENLLASPEKVAQDQVLAFKTAFWFWTTNVRTSFKS--------------------- 230
Query: 251 PGFGATMNILYGDLICGQGSIDKMNVIVSHYQHYLDLMGVGSDKAGDNLDC 301
GFGAT+ + G S K + ++Q Y +GV GDNL C
Sbjct: 231 -GFGATIRAVNSRECSGGDSTAKAANRIKYFQDYCGKLGVAP---GDNLTC 277
>AT2G43590.1 | chr2:18081592-18082749 REVERSE LENGTH=265
Length = 264
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 95/217 (43%), Gaps = 46/217 (21%)
Query: 86 FWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFLGHVGAKTSCGYSVATGGPLAWGLC 145
F+ +F+ AA F V +E+A H +T C
Sbjct: 93 FYTRDSFVNAANTFP------NFANSVTRREIATMFAHFTHETG-------------HFC 133
Query: 146 YNHELS-PSQSYCDNSNELYPCVEGVEYYGRGALPVYWNYNYGIIGQGIKQDLLNHPELL 204
Y E++ +++YC +SN YPC G Y+GRG + + WNYNYG GQ + DLL PEL+
Sbjct: 134 YIEEINGATRNYCQSSNTQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLGLDLLRQPELV 193
Query: 205 EQNATLAFEAAIWRWMTPMKRKQPSAHDVFVGNWKPTKNDTLSKRYPGFGATMNILYGDL 264
N T+AF +W WM + +P N GFGAT+ + G +
Sbjct: 194 GSNPTVAFRTGLWFWMNSV---------------RPVLNQ-------GFGATIRAING-M 230
Query: 265 ICGQGSIDKMNVIVSHYQHYLDLMGVGSDKAGDNLDC 301
C G+ +N + +Y+ Y +GV G NL C
Sbjct: 231 ECNGGNSGAVNARIGYYRDYCGQLGV---DPGPNLSC 264
>AT3G54420.1 | chr3:20145935-20147034 FORWARD LENGTH=274
Length = 273
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 99/236 (41%), Gaps = 43/236 (18%)
Query: 69 EELFAHRNDRSLAHAAG--FWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFLGHVGA 126
+E F ++ + AG F+ AF+ A + FG G + +E+AAF HV
Sbjct: 78 QEFFNGIISQAASSCAGNRFYSRGAFLEALDSYSR--FGRVGSTDDSRREIAAFFAHVTH 135
Query: 127 KTSCGYSVATGGPLAWGLCYNHELS-PSQSYCDNSNELYPCVEGVEYYGRGALPVYWNYN 185
+T CY E+ S+ YCD + YPC YYGRG + + WN+N
Sbjct: 136 ETG-------------HFCYIEEIDGASKDYCDENATQYPCNPNKGYYGRGPIQLSWNFN 182
Query: 186 YGIIGQGIKQDLLNHPELLEQNATLAFEAAIWRWMTPMKRKQPSAHDVFVGNWKPTKNDT 245
YG G I D LN PE + + ++F+ A+W W R QP
Sbjct: 183 YGPAGTAIGFDGLNAPETVATDPVISFKTALWYW---TNRVQPVISQ------------- 226
Query: 246 LSKRYPGFGATMNILYGDLICGQGSIDKMNVIVSHYQHYLDLMGVGSDKAGDNLDC 301
GFGAT+ + G L C + + V +Y Y +GV G+NL C
Sbjct: 227 ------GFGATIRAINGALECDGANTATVQARVRYYTDYCRQLGV---DPGNNLTC 273
>AT2G43580.1 | chr2:18078817-18080013 REVERSE LENGTH=266
Length = 265
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 94/217 (43%), Gaps = 46/217 (21%)
Query: 86 FWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFLGHVGAKTSCGYSVATGGPLAWGLC 145
F+ +FI A F F T V +E+A H ++ TG C
Sbjct: 94 FYTRDSFINATNTFP--SFANT----VTRREIATMFAH--------FTYETGH-----FC 134
Query: 146 YNHELS-PSQSYCDNSNELYPCVEGVEYYGRGALPVYWNYNYGIIGQGIKQDLLNHPELL 204
Y E++ S+ CD +N YPC Y+GRG L + WN+NYG GQ + DLL PEL+
Sbjct: 135 YIEEINGASRVMCDQNNRQYPCAPAKSYHGRGPLLLSWNFNYGACGQSLGLDLLRQPELV 194
Query: 205 EQNATLAFEAAIWRWMTPMKRKQPSAHDVFVGNWKPTKNDTLSKRYPGFGATMNILYGDL 264
N +AF A+W WM + +P N GFGAT+ + G
Sbjct: 195 SSNPVVAFRTALWFWMKSV---------------RPVLNQ-------GFGATIRAISG-F 231
Query: 265 ICGQGSIDKMNVIVSHYQHYLDLMGVGSDKAGDNLDC 301
C ++ +N + +Y+ Y +G+ G N+ C
Sbjct: 232 DCDGRNLGGVNARIGYYRDYCGQLGL---DPGANITC 265
>AT2G43610.1 | chr2:18088058-18089184 REVERSE LENGTH=282
Length = 281
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 94/220 (42%), Gaps = 49/220 (22%)
Query: 83 AAGFWDYHAFITAAALFEP-RGFGTTGGKEVGMKEVAAFLGHVGAKTSCGYSVATGGPLA 141
A GF+ AFI AA F +G V +E+AA L +S +G
Sbjct: 110 AKGFYTRQAFIAAAESFAAYKG-------TVAKREIAAMLAQ--------FSHESGS--- 151
Query: 142 WGLCYNHELSPSQSYCDNSNELYPCVEGVEYYGRGALPVYWNYNYGIIGQGIKQDLLNHP 201
CY E++ + YC S YPC G YYGRG + + WNYNYG G+ + LL P
Sbjct: 152 --FCYKEEIARGR-YCSPSTT-YPCQPGKNYYGRGPIQITWNYNYGAAGKFLGLPLLKDP 207
Query: 202 ELLEQNATLAFEAAIWRWMTPMKRKQPSAHDVFVGNWKPTKNDTLSKRYPGFGATMNILY 261
+++ ++ T+AF+ A+W W N +P + GFGAT +
Sbjct: 208 DMVARSPTVAFQCAMWFWNK---------------NVRPVLSQ-------GFGATTRRIN 245
Query: 262 GDLICGQGSIDKMNVIVSHYQHYLDLMGVGSDKAGDNLDC 301
G G+ + + + S HYLD G NL C
Sbjct: 246 G----GECNGGRPAAVQSRVNHYLDFCKKLGVTPGTNLSC 281
>AT2G43620.1 | chr2:18093954-18095025 REVERSE LENGTH=284
Length = 283
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 102/245 (41%), Gaps = 49/245 (20%)
Query: 57 DTITDYFKAYQFEELFAHRNDRSLAHAAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKE 116
DTI + F+ + + + A GF+ AFI AA F+ GT V +E
Sbjct: 88 DTIENVVTPAFFDGIMSKVGNG--CPAKGFYTRQAFIAAAQSFDAYK-GT-----VAKRE 139
Query: 117 VAAFLGHVGAKTSCGYSVATGGPLAWGLCYNHELSPSQSYCDNSNELYPCVEGVEYYGRG 176
+AA L ++ CY E++ + YC S YPC G +YYGRG
Sbjct: 140 IAAMLAQFSHESG-------------SFCYKEEIARGK-YCSPSTA-YPCTPGKDYYGRG 184
Query: 177 ALPVYWNYNYGIIGQGIKQDLLNHPELLEQNATLAFEAAIWRWMTPMKRKQPSAHDVFVG 236
+ + WNYNYG G+ + LL P+++ ++ +AF+ A+W W
Sbjct: 185 PIQITWNYNYGAAGKFLGLPLLTDPDMVARSPQVAFQCAMWFWNL--------------- 229
Query: 237 NWKPTKNDTLSKRYPGFGATMNILYGDLICGQGSIDKMNVIVSHYQHYLDLMGVGSDKAG 296
N +P + GFGAT + G G+ + + + S +YL+ G
Sbjct: 230 NVRPVLDQ-------GFGATTRKING----GECNGRRPAAVQSRVNYYLEFCRTLGITPG 278
Query: 297 DNLDC 301
NL C
Sbjct: 279 ANLSC 283
>AT2G43600.1 | chr2:18086049-18087018 REVERSE LENGTH=274
Length = 273
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 97/222 (43%), Gaps = 53/222 (23%)
Query: 83 AAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFLGHV--GAKTSCGYSVATGGPL 140
A GF+ Y AFITA + FG GK V +E+AA L H G+K+
Sbjct: 102 AKGFYTYEAFITAF-----KSFGAYKGK-VAKREIAAILAHFSYGSKS------------ 143
Query: 141 AWGLCYNHELSPSQSYCDNSNELYPCVEGVEYYGRGAL-PVYWNYNYGIIGQGIKQDLLN 199
CY E+S ++ YC S + YPC G YYGRG L + WN YG G+ + LL
Sbjct: 144 ---FCYKEEIS-NERYCSKSKK-YPCEPGKNYYGRGLLQSITWNEYYG-AGKHLGLPLLK 197
Query: 200 HPELLEQNATLAFEAAIWRWMTPMKRKQPSAHDVFVGNWKPTKNDTLSKRYPGFGATMNI 259
P+L+ ++ +AF+ A+W W N +P Y GFG
Sbjct: 198 DPDLVSRSPEVAFKFAMWFWNR---------------NVRPA-------LYLGFGEITKR 235
Query: 260 LYGDLICGQGSIDKMNVIVSHYQHYLDLMGVGSDKAGDNLDC 301
+ G CG D V Y + +++GV D+ LDC
Sbjct: 236 VDGRE-CGNWRRDDTKNKVKQYIEFCEMLGVTPDQG---LDC 273
>AT1G56680.1 | chr1:21250428-21251417 REVERSE LENGTH=281
Length = 280
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 79/154 (51%), Gaps = 25/154 (16%)
Query: 74 HRNDRSLAH---AAGFWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFLGHVGAKTSC 130
HR R + GF+ AFITA FE G+ T V +E+AA L
Sbjct: 94 HRLMRKVGSNCTGKGFYTREAFITAVKSFE--GYKGT----VAKREIAAILAQ------- 140
Query: 131 GYSVATGGPLAWGLCYNHELSPSQSYCDNSNELYPCVEGVEYYGRGAL-PVYWNYNYGII 189
+S +G CY E++ S++YC +S++ YPC G +YYGRG L + WN YG
Sbjct: 141 -FSYESGN-----FCYKEEVT-SETYC-SSSKTYPCQSGKKYYGRGLLQSIKWNEFYGEA 192
Query: 190 GQGIKQDLLNHPELLEQNATLAFEAAIWRWMTPM 223
G+ + LL P+++ ++ +AF+ A+W W T +
Sbjct: 193 GKYLGLPLLKDPDMVARSPEVAFKFAMWFWKTEV 226
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,359,450
Number of extensions: 334381
Number of successful extensions: 595
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 570
Number of HSP's successfully gapped: 13
Length of query: 316
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 217
Effective length of database: 8,392,385
Effective search space: 1821147545
Effective search space used: 1821147545
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)