BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0519400 Os08g0519400|AK070323
(452 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31340.1 | chr4:15205662-15208950 FORWARD LENGTH=438 366 e-101
AT2G24420.1 | chr2:10380147-10382624 FORWARD LENGTH=441 356 2e-98
AT4G30090.1 | chr4:14709135-14711612 REVERSE LENGTH=389 119 3e-27
AT1G28410.1 | chr1:9976596-9979080 REVERSE LENGTH=278 54 1e-07
>AT4G31340.1 | chr4:15205662-15208950 FORWARD LENGTH=438
Length = 437
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/370 (48%), Positives = 247/370 (66%), Gaps = 2/370 (0%)
Query: 59 QLRDKISGLESGISERSKELKAKDDSIAKLEKLIEEKSQKIASLQSEITSLQAKGSVAAE 118
QL KI LES I E+++E++ KD+ +A+ EKL++E+ KIASLQ+E++SLQ KGS +
Sbjct: 45 QLNAKIRALESQIDEKTREVQGKDEVVAEKEKLLKEREDKIASLQTEVSSLQKKGSSDSA 104
Query: 119 EQAGKANARAVELEKQIDKLKKDVEAQSVKKATLENRANDAEKRVQELNAKIDALQKTND 178
+Q GKA ARA ELEKQ++ LK +E ++ +K + E R N+AEK+++ELN+ +D LQKTN+
Sbjct: 105 KQLGKAQARADELEKQVEVLKNFLEQKNKEKDSTEARTNEAEKKLRELNSSLDKLQKTNE 164
Query: 179 EQKRKLQSTERALKVAEEELMRLHLEATTKSKQLTEVHGAWLPPWLAAHSAHYMEVISGH 238
EQK K+ ERA+K+AEEE++R LEATTK+K+L E HG+WLPPWLA H + H
Sbjct: 165 EQKNKIGKLERAIKIAEEEMLRTKLEATTKAKELLEAHGSWLPPWLAVHWFKFQTYTETH 224
Query: 239 WNEHGKPAINSFLXXXXXXXXXXXXXXXPHVETAKMXXXXXXXXXXXXXXNTEPYVQKVS 298
W HGKPA+ + + PHVE K + EP+ + +S
Sbjct: 225 WEAHGKPAVETVILKVTEAKAQAEKWAEPHVENVKT--KYIPAIKETVTIHVEPHFRTLS 282
Query: 299 SKSVEVYEASRDAVKPHVAKVKEFADPYFQEAKKFSKPYIDQVAEVTKPHVEKVRTTLKP 358
K+ E Y +S+ AV PH+ V+EF DPY+QEAKKFSKPY+DQVA TKPHV+K++ +KP
Sbjct: 283 IKAKEAYHSSKSAVSPHIVTVQEFVDPYYQEAKKFSKPYVDQVATTTKPHVDKMKVAMKP 342
Query: 359 YTKRAVRVYGSFLESATTYHRQAQSTILDYLHQHEVSKSLATKELVWFLASALLAIPVYI 418
YT + + VY FLESATTYH Q Q+ + L HE+++ AT E VWF ASALL P+++
Sbjct: 343 YTTKVIIVYTEFLESATTYHNQVQAHVERKLKSHELTEPFATNEFVWFAASALLVFPIFV 402
Query: 419 IYRLLMEAFC 428
YR+L FC
Sbjct: 403 AYRVLSSLFC 412
>AT2G24420.1 | chr2:10380147-10382624 FORWARD LENGTH=441
Length = 440
Score = 356 bits (913), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 173/370 (46%), Positives = 246/370 (66%), Gaps = 2/370 (0%)
Query: 59 QLRDKISGLESGISERSKELKAKDDSIAKLEKLIEEKSQKIASLQSEITSLQAKGSVAAE 118
QL KI LES I +++KELK +++ + + EKL++E+ K+ASL++E++SL+ KGS +
Sbjct: 48 QLNAKIRALESQIDDKTKELKGREELVTEKEKLLQERQDKVASLETEVSSLRKKGSSDSV 107
Query: 119 EQAGKANARAVELEKQIDKLKKDVEAQSVKKATLENRANDAEKRVQELNAKIDALQKTND 178
E KA ARA ELEKQ++ LKK +E ++ +K +E + ++ EK++ ELN++++ L KTN+
Sbjct: 108 ELLSKAQARATELEKQVEVLKKFLEQKNKEKELIEAQTSETEKKLNELNSRVEKLHKTNE 167
Query: 179 EQKRKLQSTERALKVAEEELMRLHLEATTKSKQLTEVHGAWLPPWLAAHSAHYMEVISGH 238
EQK K++ ERALK++EEE++R EATTK+K+L EVHGAWLPPW A H + + V H
Sbjct: 168 EQKNKIRKLERALKISEEEMLRTKHEATTKAKELMEVHGAWLPPWFAVHWSSFQTVAGTH 227
Query: 239 WNEHGKPAINSFLXXXXXXXXXXXXXXXPHVETAKMXXXXXXXXXXXXXXNTEPYVQKVS 298
W+ HGKP + PH+ A + + EP+VQ +S
Sbjct: 228 WDAHGKPVMEKVTQKVTLAKNQAEKWAKPHM--ANVKTKYIPAIKETVKTHVEPHVQTLS 285
Query: 299 SKSVEVYEASRDAVKPHVAKVKEFADPYFQEAKKFSKPYIDQVAEVTKPHVEKVRTTLKP 358
+K+ E Y AS+ AV PH+ K +E DPY+QEAKKFSKPY+DQVA TKPHV+KVR T+KP
Sbjct: 286 TKAKEAYHASKSAVTPHIVKFQEHVDPYYQEAKKFSKPYVDQVATATKPHVDKVRATMKP 345
Query: 359 YTKRAVRVYGSFLESATTYHRQAQSTILDYLHQHEVSKSLATKELVWFLASALLAIPVYI 418
YT + V Y FLESA+TYH Q Q+ + L HE+ + ATKE +WF ASALLA+P++I
Sbjct: 346 YTTKTVHYYKEFLESASTYHHQLQANVESKLKSHELLEPFATKEFIWFAASALLALPIFI 405
Query: 419 IYRLLMEAFC 428
+Y+ L FC
Sbjct: 406 VYKFLCSLFC 415
>AT4G30090.1 | chr4:14709135-14711612 REVERSE LENGTH=389
Length = 388
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 163/366 (44%), Gaps = 56/366 (15%)
Query: 59 QLRDKISGLESGISERSKELKAKDDSIAKLEKLIEEKSQKIASLQSEITSLQAKGSVAAE 118
+L+ +S L+S I E+++EL +K++ I LE I EK +SEI Q + V
Sbjct: 46 ELKSTVSALQSIIKEKNQELLSKEEKIRGLELYIREKP---YLFESEIDFSQFENPV--- 99
Query: 119 EQAGKANARAVELEKQIDKLKKDVEAQSVKKATLENRANDAEKRVQELNAKIDALQKTND 178
+ A + + EL+KQ+ LK++VE Q +K LE A A+K+V +L++K++ +
Sbjct: 100 KHASEVEEKVYELQKQVFGLKREVETQ--RKRRLEVEAELADKKVAQLSSKLENI----- 152
Query: 179 EQKRKLQSTERALKVAEEELMRLHLEATTKSKQLTEVHGAWLPPWLAAHSAHYMEVISGH 238
W L + +
Sbjct: 153 --------------------------------------DGWFLSKLGLNPTESQAYLMTL 174
Query: 239 WNEHGKPAINSFLXXXXXXXXXXXXXXXPHVETAKMX-XXXXXXXXXXXXXNTEPYVQKV 297
W++H P +++ L PH+ET EP VQ +
Sbjct: 175 WHQHLSPTLHTTLQMVSMKIEQVQKWSEPHIETLNSQWIPSIKDACVTITIYLEPKVQYI 234
Query: 298 SSKSVEVYEASRDAVKPHVAKVKEFADPYFQEAKKFSKPYIDQVAEVTKPHVEKVRTTLK 357
+ KS+E+ S+ A+ PH+ + + + Y + + + PY ++ +TKPH+E+V+ L+
Sbjct: 235 TDKSIELLYTSKQALTPHLIQGFDASYYYLEVIRTHTHPYTTRIMTLTKPHLERVQVALE 294
Query: 358 PYTKRAVRVYGSFLESATTYHRQAQSTILDYLHQHEVSKSLATKELVWFLASALLAIPVY 417
PYT+ + + S YH+QAQ + L +E++K +AT +L W A+AL+ P+
Sbjct: 295 PYTENVRHGFQKLVNSTKIYHQQAQ----EMLKNNEITKPVATMDLAWVGATALIGFPLI 350
Query: 418 IIYRLL 423
I +LL
Sbjct: 351 FIIKLL 356
>AT1G28410.1 | chr1:9976596-9979080 REVERSE LENGTH=278
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Query: 315 HVAKVKEFADPYFQEAKKFSKPYIDQVAEVTKPHVEKVR------------TTLKPYTKR 362
H+ +++EF + + P++ ++++ + H+ KV +++PY +
Sbjct: 157 HLEQMREFNNRRHHTPSRC--PFVKLMSDIQRKHLPKVDEAFDIHWKGKKVLSVQPYLTK 214
Query: 363 AVRVYGSFLESATTYHRQAQSTILDYLHQHEVSKSLATKELVWFLASALLAIPVYIIYRL 422
A+ S + T YH Q Q I + + E++ +LA +E+V+F+ASAL+ PV+ + L
Sbjct: 215 ALSQLKSLWAAVTKYHHQLQGFIEHEMERTEITAALANREVVFFMASALITFPVFGAWML 274
Query: 423 L 423
L
Sbjct: 275 L 275
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.125 0.338
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,241,955
Number of extensions: 214236
Number of successful extensions: 2350
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 2410
Number of HSP's successfully gapped: 18
Length of query: 452
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 350
Effective length of database: 8,310,137
Effective search space: 2908547950
Effective search space used: 2908547950
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 113 (48.1 bits)