BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0519100 Os08g0519100|AK063323
(450 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46760.1 | chr2:19213028-19215166 REVERSE LENGTH=604 278 3e-75
AT2G46750.1 | chr2:19208443-19210909 REVERSE LENGTH=592 275 3e-74
AT2G46740.1 | chr2:19205182-19207455 REVERSE LENGTH=591 271 7e-73
AT1G32300.1 | chr1:11651342-11653365 FORWARD LENGTH=596 268 5e-72
AT5G56490.1 | chr5:22871507-22873420 FORWARD LENGTH=578 263 2e-70
AT5G11540.1 | chr5:3703002-3704981 REVERSE LENGTH=586 196 3e-50
AT5G56470.1 | chr5:22869060-22869958 FORWARD LENGTH=253 146 3e-35
AT3G47930.1 | chr3:17684500-17687426 FORWARD LENGTH=611 54 1e-07
>AT2G46760.1 | chr2:19213028-19215166 REVERSE LENGTH=604
Length = 603
Score = 278 bits (712), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 211/358 (58%), Gaps = 31/358 (8%)
Query: 23 LLAAAVNTPV---VQCASGTTKCTVTNAFGAFPDGSTCHVAAAAFPATEEELVRVVAGAA 79
L+ ++TP V+C SG T CTVTN++GAFPD STC A A+P TE EL+ VVA A
Sbjct: 29 LVFTTISTPPEDPVKCVSGNTNCTVTNSYGAFPDRSTCRAANVAYPTTEAELISVVAAAT 88
Query: 80 ASGTKMKVATRLGHNFMKLSCPGG-DGLVISTNALNRVVGVNAARMEITVESGVTLSELI 138
+G KM+V TR H+ KL+C G DGL+IST LN V +A M +TVESGVTL +LI
Sbjct: 89 KAGRKMRVTTRYSHSITKLACTDGTDGLLISTKFLNHTVRTDATAMTLTVESGVTLRQLI 148
Query: 139 DXXXXXXXXXXXXXYWLDLTVGGLLSTGAHGSSVSGKGGAVHEYVTGMRVVTPAPASEGY 198
YW LTVGG++ TGAHGSS+ GKG AVH+YVT +R+V+P ++G+
Sbjct: 149 AEAAKVGLALPYAPYWWGLTVGGMMGTGAHGSSLWGKGSAVHDYVTEIRIVSPGSVNDGF 208
Query: 199 AKVRVV--NAGDPDLDAVKVSLGVLGVISQVTLALQPLFNRSVSFRRRGDGDLAERAVAF 256
AKVRV+ + +A KVSLGVLGVISQVTL LQP+F RS+ + R D D ++AV F
Sbjct: 209 AKVRVLRETTTPKEFNAAKVSLGVLGVISQVTLKLQPMFKRSLRYVMRNDSDFGDQAVTF 268
Query: 257 AGEHEFGDVVWYPARGEAVFRIDDRVATTKTNTISSGDFQNVIQSSRSTEQQQHGDVLPF 316
+HEF D +W P++G+ V+R+DDRVA NT +G D +PF
Sbjct: 269 GMKHEFADFIWLPSQGKVVYRMDDRVA---VNTSGNGLL----------------DFMPF 309
Query: 317 QAGISVPLSRASAFIRDAQRLLDMNPGALCGGENGGILIRYVKASTAYLGKTEDSVEF 374
++ +S L+ + +R D N G G LI +T+Y G T + + F
Sbjct: 310 RSQLSAALAIIRSSEETQERFRDAN-----GKCAGATLITSTLFATSY-GLTNNGMIF 361
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 89/137 (64%), Gaps = 9/137 (6%)
Query: 317 QAGISVPLSRASAFIRDAQRLLDMNPGALCGGE-NGGILIRYVKASTAYLGKTEDSVEFD 375
Q S+PL++ +FI D + L+ + +LC E GIL+RYV +S AYLGK ++++FD
Sbjct: 404 QTTFSIPLTQVKSFINDIKSLVKIESKSLCVLELYDGILMRYVTSSPAYLGKETEALDFD 463
Query: 376 TTSCRHDGDAAMP-------EEMEQMALRKYGGVPHWGKNRNVAFDGAIAKFPKAGEFMK 428
T R D P EE+EQ+AL KY +PHWGKNRN+AFDG I K+ F+K
Sbjct: 464 LTYYRAK-DPLSPRLYEDFIEEIEQIALFKYNALPHWGKNRNLAFDGVIKKYKNVPAFLK 522
Query: 429 VKDAYDPDGLFSSEWSD 445
VK++YDP GLFSSEW+D
Sbjct: 523 VKESYDPMGLFSSEWTD 539
>AT2G46750.1 | chr2:19208443-19210909 REVERSE LENGTH=592
Length = 591
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 149/325 (45%), Positives = 197/325 (60%), Gaps = 25/325 (7%)
Query: 23 LLAAAVNTPV---VQCASGTTKCTVTNAFGAFPDGSTCHVAAAAFPATEEELVRVVAGAA 79
L+ AV+TP V+C SG T CTVTN++GAFPD STC A A+P TE ELV VVA A
Sbjct: 21 LMHTAVSTPPDDPVKCVSGNTNCTVTNSYGAFPDRSTCRAANVAYPKTEAELVSVVAAAT 80
Query: 80 ASGTKMKVATRLGHNFMKLSCPGG-DGLVISTNALNRVVGVNAARMEITVESGVTLSELI 138
+G KM+V TR H+ KL C G +GL IST LN V +A M +TVESG+TL +LI
Sbjct: 81 QAGRKMRVTTRYSHSITKLVCTDGTEGLFISTKFLNHTVQADATAMTMTVESGMTLRQLI 140
Query: 139 DXXXXXXXXXXXXXYWLDLTVGGLLSTGAHGSSVSGKGGAVHEYVTGMRVVTPAPASEGY 198
YW LTVGG++ TGAHGSS+ GKG AVH+YVT +R+V+P +EG+
Sbjct: 141 VEAAKVGLALPYAPYWWGLTVGGMMGTGAHGSSLWGKGSAVHDYVTEIRMVSPGSVNEGF 200
Query: 199 AKVRVVNAGDP--DLDAVKVSLGVLGVISQVTLALQPLFNRSVSFRRRGDGDLAERAVAF 256
AK+R+++ + +A KVSLGVLGVISQVT LQP+F RS+++ R D D ++AV F
Sbjct: 201 AKIRILSETTTPNEFNAAKVSLGVLGVISQVTFELQPMFKRSLTYTMRNDSDFEDQAVTF 260
Query: 257 AGEHEFGDVVWYPARGEAVFRIDDRVATTKTNTISSGDFQNVIQSSRSTEQQQHGDVLPF 316
+HEF D +W P++G+ V+R DDRVA NT +G F D LPF
Sbjct: 261 GKKHEFADFIWLPSQGKVVYRRDDRVA---VNTSGNGLF----------------DFLPF 301
Query: 317 QAGISVPLSRASAFIRDAQRLLDMN 341
++ +S ++ +R D N
Sbjct: 302 RSQLSAAIAIIRTSEETQERFRDAN 326
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 93/137 (67%), Gaps = 9/137 (6%)
Query: 317 QAGISVPLSRASAFIRDAQRLLDMNPGALCGGE-NGGILIRYVKASTAYLGKTEDSVEFD 375
Q +SVPL++ +FI D + L+ + +LCG E + GIL+RYV +S AYLGK ++++FD
Sbjct: 396 QTTLSVPLTQVKSFISDIKSLVKIEQKSLCGLELHYGILMRYVTSSPAYLGKETEALDFD 455
Query: 376 TTSCRHDGDAAMP-------EEMEQMALRKYGGVPHWGKNRNVAFDGAIAKFPKAGEFMK 428
T R D P EE+EQ+AL KY +PHWGKNRN+AFDG I K+ A F+K
Sbjct: 456 ITYYRAK-DPLTPRLYEDFIEEIEQIALFKYNALPHWGKNRNLAFDGVIRKYNNAPAFLK 514
Query: 429 VKDAYDPDGLFSSEWSD 445
VKD+YDP GLFSSEW+D
Sbjct: 515 VKDSYDPKGLFSSEWTD 531
>AT2G46740.1 | chr2:19205182-19207455 REVERSE LENGTH=591
Length = 590
Score = 271 bits (692), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 144/303 (47%), Positives = 192/303 (63%), Gaps = 18/303 (5%)
Query: 23 LLAAAVNTPV---VQCASGTTKCTVTNAFGAFPDGSTCHVAAAAFPATEEELVRVVAGAA 79
L+ ++TP V+C SG T C VTN+ GAFPD STC A A+P TE ELV +VA A
Sbjct: 25 LVHTVISTPPEDPVKCVSGNTNCIVTNSLGAFPDRSTCRAANVAYPTTEAELVSIVAAAT 84
Query: 80 ASGTKMKVATRLGHNFMKLSCP-GGDGLVISTNALNRVVGVNAARMEITVESGVTLSELI 138
+G KM+V TR H+ KL+C G DGL IST LN V +A M +TVESGVTL +LI
Sbjct: 85 KAGRKMRVTTRYSHSIPKLTCTDGNDGLFISTKFLNHTVQADAKAMTLTVESGVTLRQLI 144
Query: 139 DXXXXXXXXXXXXXYWLDLTVGGLLSTGAHGSSVSGKGGAVHEYVTGMRVVTPAPASEGY 198
YW +TVGG++ TGAHGSS+ GKG AVH+YVT +R+V+P ++G+
Sbjct: 145 AEAAKVGLALPYAPYWWGVTVGGMMGTGAHGSSLWGKGSAVHDYVTEIRMVSPGSVNDGF 204
Query: 199 AKVRVVNAGDP--DLDAVKVSLGVLGVISQVTLALQPLFNRSVSFRRRGDGDLAERAVAF 256
AK+RV++ + +A KVSLGVLGVISQVT LQP+F RS+ + R D D + A+ F
Sbjct: 205 AKIRVLSETTTPNEFNAAKVSLGVLGVISQVTFELQPMFKRSLKYVMRNDLDFNDEALTF 264
Query: 257 AGEHEFGDVVWYPARGEAVFRIDDRVATTKTNTISSG--DF-------QNVIQSSRSTEQ 307
+HEF D VW P++G+ V+R+DDRVA NT+ +G DF V+ ++RS+E+
Sbjct: 265 GKKHEFADFVWLPSQGKVVYRMDDRVA---VNTLGNGLYDFFPFRSQLSAVLATTRSSEE 321
Query: 308 QQH 310
Q
Sbjct: 322 TQE 324
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 95/141 (67%), Gaps = 9/141 (6%)
Query: 313 VLPFQAGISVPLSRASAFIRDAQRLLDMNPGALCGGE-NGGILIRYVKASTAYLGKTEDS 371
V Q S+PL++ +FI D + LL ++ +LCG E GIL+RYV +S AYLGK ++
Sbjct: 396 VFYHQTTFSIPLTQVKSFINDIKSLLKIDSKSLCGLELYYGILMRYVTSSPAYLGKETEA 455
Query: 372 VEFDTTSCRHDGDAAMP-------EEMEQMALRKYGGVPHWGKNRNVAFDGAIAKFPKAG 424
++FD T R + D P EE+EQ+AL KY +PHWGKNRN+AFDG I K+ A
Sbjct: 456 IDFDITYYRAN-DPLTPRLYEDFIEEIEQIALLKYNALPHWGKNRNLAFDGVIKKYKNAP 514
Query: 425 EFMKVKDAYDPDGLFSSEWSD 445
F+KVK++YDP+GLFSSEW+D
Sbjct: 515 AFLKVKESYDPNGLFSSEWTD 535
>AT1G32300.1 | chr1:11651342-11653365 FORWARD LENGTH=596
Length = 595
Score = 268 bits (685), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 189/310 (60%), Gaps = 25/310 (8%)
Query: 22 CLLAAAVNTPV---VQCASGTTKCTVTNAFGAFPDGSTCHVAAAAFPATEEELVRVVAGA 78
C A +TP V+C SG CTVTN++GAFPD S C A +P TE ELV +VA A
Sbjct: 11 CFCTFASSTPPDDPVKCESGNNMCTVTNSYGAFPDRSICEAAKVEYPKTEAELVSIVAAA 70
Query: 79 AASGTKMKVATRLGHNFMKLSCP-GGDGLVISTNALNRVVGVNAARMEITVESGVTLSEL 137
+G K++V TR H+ KL C G DG++IST LN VVG N +TVESGVTL +L
Sbjct: 71 TRAGQKVRVVTRYVHSIPKLVCTDGKDGVLISTKFLNNVVGTNPEAKTLTVESGVTLRQL 130
Query: 138 IDXXXXXXXXXXXXXYWLDLTVGGLLSTGAHGSSVSGKGGAVHEYVTGMRVVTPAPASEG 197
I YW LTVGGL+ TGAHGSS+ GKG AVH+YV+ +R+V+P AS+G
Sbjct: 131 IGEAAELELALPHAPYWWGLTVGGLMGTGAHGSSLWGKGSAVHDYVSEIRMVSPGLASDG 190
Query: 198 YAKVRVVNAG-DPD-LDAVKVSLGVLGVISQVTLALQPLFNRSVSFRRRGDGDLAERAVA 255
Y KVRV++ DPD A KVSLGVLGVISQVT LQP+F RS++F + D D ++AV
Sbjct: 191 YVKVRVLSETIDPDEFRAAKVSLGVLGVISQVTFQLQPMFKRSLTFVMQNDSDFGDQAVT 250
Query: 256 FAGEHEFGDVVWYPARGEAVFRIDDRVATTKTNTISSGDFQNVIQSSRSTEQQQHGDVLP 315
F +HEF D +W P++G+ V+R+DDRV NT +G F D P
Sbjct: 251 FGEKHEFADFLWLPSQGKVVYRMDDRVP---VNTSGNGLF----------------DFFP 291
Query: 316 FQAGISVPLS 325
F+ +SV L+
Sbjct: 292 FRPQLSVALA 301
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 90/137 (65%), Gaps = 8/137 (5%)
Query: 317 QAGISVPLSRASAFIRDAQRLLDMNPGALCGGE-NGGILIRYVKASTAYLGKTEDSVEFD 375
Q S+PL+R FI D + L+ + P +LC E + GILIRYV +S A+LGK E +++FD
Sbjct: 387 QTAFSIPLTRVKGFINDIKALVKIEPKSLCALERSNGILIRYVTSSPAFLGKEEKALDFD 446
Query: 376 TTSCRHDGDAAMP-------EEMEQMALRKYGGVPHWGKNRNVAFDGAIAKFPKAGEFMK 428
T R D P EE+EQMA+ KY +PHWGKNRN+AFDG I K+ A F+K
Sbjct: 447 LTYYRSKDDPLAPRLYEDFIEEIEQMAIFKYNALPHWGKNRNLAFDGVIRKYKNANTFLK 506
Query: 429 VKDAYDPDGLFSSEWSD 445
VK+ +DP GLFS+EW++
Sbjct: 507 VKERFDPLGLFSTEWTN 523
>AT5G56490.1 | chr5:22871507-22873420 FORWARD LENGTH=578
Length = 577
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/284 (49%), Positives = 179/284 (63%), Gaps = 9/284 (3%)
Query: 19 LTQCLLAAAVNTPV---VQCASGTTKCTVTNAFGAFPDGSTCHVAAAAFPATEEELVRVV 75
L C A ++P V C G T CTVTN++GAFPD S C A +P TE ELV +V
Sbjct: 7 LIFCFFTFASSSPPDDPVNCEFGNTMCTVTNSYGAFPDRSICKAAKVEYPRTEAELVSIV 66
Query: 76 AGAAASGTKMKVATRLGHNFMKLSCP-GGDGLVISTNALNRVVGVNAARMEITVESGVTL 134
A A +G KM+V TR H+F KL C G DG +IST LN VV N +TVESGVTL
Sbjct: 67 AAATRAGQKMRVVTRYSHSFPKLVCTDGKDGTLISTKFLNHVVTTNPEAKTLTVESGVTL 126
Query: 135 SELIDXXXXXXXXXXXXXYWLDLTVGGLLSTGAHGSSVSGKGGAVHEYVTGMRVVTPAPA 194
+LI+ YW LTVGG++ TGAHGSS+ GKG AVH+YVT +R+V+P A
Sbjct: 127 RQLIEEAAKFDLALPYAPYWWGLTVGGMMGTGAHGSSLWGKGSAVHDYVTEIRLVSPGLA 186
Query: 195 SEGYAKVRVVNAG-DP-DLDAVKVSLGVLGVISQVTLALQPLFNRSVSFRRRGDGDLAER 252
S+GY KV+V++ DP + A KVSLGVLGVISQVT LQP+F RS+++ R D D ++
Sbjct: 187 SDGYVKVQVLSETIDPEEFRAAKVSLGVLGVISQVTFELQPMFKRSLNYVMRNDSDFGDQ 246
Query: 253 AVAFAGEHEFGDVVWYPARGEAVFRIDDRVATTKTNTISSGDFQ 296
AV+F HEF D +W P++G+ V+R+D RV NT G F+
Sbjct: 247 AVSFGERHEFADFLWLPSQGKVVYRMDGRVP---LNTSGDGLFE 287
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 89/137 (64%), Gaps = 8/137 (5%)
Query: 317 QAGISVPLSRASAFIRDAQRLLDMNPGALCGGE-NGGILIRYVKASTAYLGKTEDSVEFD 375
Q SV L+ +FI D + L+ + P +LC E + GILIRYV +S A+LGK E +++FD
Sbjct: 386 QTTFSVSLTNVKSFINDIKALVKIEPKSLCVLEGSNGILIRYVTSSLAFLGKEEKALDFD 445
Query: 376 TTSCRHDGDAAMP-------EEMEQMALRKYGGVPHWGKNRNVAFDGAIAKFPKAGEFMK 428
T R D P EE+EQMA+ KY +PHWGKNRN+AFDGAI K+ A F+K
Sbjct: 446 LTYYRSKNDPLAPRLYEDYIEEIEQMAIFKYNALPHWGKNRNLAFDGAIRKYKNANAFLK 505
Query: 429 VKDAYDPDGLFSSEWSD 445
VK+ +D GLFS+EW+D
Sbjct: 506 VKEKFDSLGLFSTEWTD 522
>AT5G11540.1 | chr5:3703002-3704981 REVERSE LENGTH=586
Length = 585
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/254 (44%), Positives = 161/254 (63%), Gaps = 5/254 (1%)
Query: 31 PVVQCASGTTKCTVTNAFGAFPDGSTCHVAAAAFPATEEELVRVVAGAAASGTKMKVATR 90
P ++C T CTV+NA+G +PD TCH A +P TEE+L + VA AA K+K T+
Sbjct: 29 PPIRCDQ--TGCTVSNAYGTWPDRKTCHAANVTYPTTEEDLRKAVAYAAEHNLKVKTVTK 86
Query: 91 LGHNFMKLSCPGG-DGLVISTNALNRVVGVNAARMEITVESGVTLSELIDXXXXXXXXXX 149
H KL+CP G D L+IST+ N V+ + + +T +SGV+L ELI+
Sbjct: 87 FSHTIPKLACPSGSDALLISTSKYNSVIEIEPELLTVTADSGVSLRELIEKVEGAGFSIG 146
Query: 150 XXXYWLDLTVGGLLSTGAHGSSVSGKGGAVHEYVTGMRVVTPAPASEGYAKVRVVNAGDP 209
YW +++GGL+STG+HGSS SG+GG+VH++V G+ +V PA SEG+AKV + G
Sbjct: 147 TSPYWEGVSIGGLISTGSHGSSWSGRGGSVHDHVVGISLVVPANQSEGFAKVVRLEEGRD 206
Query: 210 D--LDAVKVSLGVLGVISQVTLALQPLFNRSVSFRRRGDGDLAERAVAFAGEHEFGDVVW 267
D L+AVKVSLGVLGVIS+V L+++ F RSV++ D L + + ++EFGD+ W
Sbjct: 207 DTLLNAVKVSLGVLGVISKVKLSIEKAFKRSVTYNFTSDVALEDIFMEHGKKYEFGDITW 266
Query: 268 YPARGEAVFRIDDR 281
YP+R AV+R D R
Sbjct: 267 YPSRKTAVYRYDIR 280
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 79/132 (59%), Gaps = 10/132 (7%)
Query: 323 PLSRASAFIRDAQRLLDMNPGALCGGE-NGGILIRYVKASTAYLGKTEDSVEFDTTSCRH 381
P+SR F+ D ++L DM P LCG + GI IR++K S AYLG+TEDSV D R
Sbjct: 397 PVSRFRDFLLDVKKLRDMKPERLCGIDIYNGIFIRFIKGSKAYLGQTEDSVVIDFNYYRA 456
Query: 382 DGDAAMP-------EEMEQMALRKYGGVPHWGKNRNVAFDGAIAKF-PKAGEFMKVKDAY 433
D D P EEMEQMA K+G PHWGKNR V F G K P +F++VK+
Sbjct: 457 D-DELTPRLNQDVMEEMEQMAFVKHGAKPHWGKNRKVGFFGVKQKIGPNFDKFLEVKNKL 515
Query: 434 DPDGLFSSEWSD 445
DP +FSSEWSD
Sbjct: 516 DPKKMFSSEWSD 527
>AT5G56470.1 | chr5:22869060-22869958 FORWARD LENGTH=253
Length = 252
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 100/158 (63%), Gaps = 9/158 (5%)
Query: 296 QNVIQSSRSTEQQQHGDVLPFQAGISVPLSRASAFIRDAQRLLDMNPGALCGGE-NGGIL 354
QN + +S + + G+ +Q +SVPL+ FI D + L+ + P +LCG E N G+L
Sbjct: 41 QNGLITSCPWDPRIKGEFF-YQTALSVPLTHVKDFINDIKALVKIEPKSLCGLELNYGVL 99
Query: 355 IRYVKASTAYLGKTEDSVEFDTTSCRHDGDAAMP-------EEMEQMALRKYGGVPHWGK 407
+RYV +S AYL K E +++FD T R D P EE+EQMA+ KY +PHWGK
Sbjct: 100 VRYVTSSPAYLRKEEKALDFDLTYYRSKDDPWTPRLYEDYMEEIEQMAILKYNALPHWGK 159
Query: 408 NRNVAFDGAIAKFPKAGEFMKVKDAYDPDGLFSSEWSD 445
NRN+AFDGAI K+ A F+KVK+ DP GLFS+EW+D
Sbjct: 160 NRNLAFDGAIKKYKNANTFLKVKERLDPWGLFSTEWTD 197
>AT3G47930.1 | chr3:17684500-17687426 FORWARD LENGTH=611
Length = 610
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 101 PGGDGL----VISTNALNRVVGVNAARMEITVESGVTLSELIDXXXXXXXXXXXXXYWLD 156
P G GL +++ +++V+ V+ + +TV++G+ + +L+D +
Sbjct: 158 PNGIGLSRSGMVNLALMDKVLEVDKEKKRVTVQAGIRVQQLVDAIKDYGLTLQNFASIRE 217
Query: 157 LTVGGLLSTGAHGSSVSGKGGAVHEYVTGMRVVTPAPASEGYAKVRVVNAGDPDL-DAVK 215
+GG++ GAHG+ + + E V M++VTPA + + + DP+L +
Sbjct: 218 QQIGGIIQVGAHGT--GARLPPIDEQVISMKLVTPAKGT-----IELSREKDPELFHLAR 270
Query: 216 VSLGVLGVISQVTL 229
LG LGV+++VTL
Sbjct: 271 CGLGGLGVVAEVTL 284
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,160,717
Number of extensions: 365993
Number of successful extensions: 819
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 790
Number of HSP's successfully gapped: 14
Length of query: 450
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 348
Effective length of database: 8,310,137
Effective search space: 2891927676
Effective search space used: 2891927676
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)