BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0517700 Os08g0517700|AK071151
(388 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25850.1 | chr4:13143859-13146654 FORWARD LENGTH=384 387 e-108
AT5G57240.1 | chr5:23193449-23195303 FORWARD LENGTH=380 385 e-107
AT4G25860.1 | chr4:13147357-13149527 FORWARD LENGTH=387 372 e-103
AT2G31030.1 | chr2:13206004-13207815 FORWARD LENGTH=490 54 1e-07
AT5G02100.1 | chr5:413639-416016 FORWARD LENGTH=454 54 1e-07
AT3G09300.1 | chr3:2858068-2860462 FORWARD LENGTH=459 53 3e-07
AT5G59420.1 | chr5:23961731-23964623 FORWARD LENGTH=458 53 3e-07
AT4G08180.1 | chr4:5169727-5173360 FORWARD LENGTH=815 52 7e-07
AT2G31020.1 | chr2:13201668-13204682 FORWARD LENGTH=761 51 1e-06
>AT4G25850.1 | chr4:13143859-13146654 FORWARD LENGTH=384
Length = 383
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/370 (51%), Positives = 258/370 (69%), Gaps = 5/370 (1%)
Query: 20 PLSLEGGLAAELRPANLVQRVLSLFRNVRPGSDLSHFQLPATFNLPKSQLQLYGEGVYC- 78
P SLE +E +N+++++LSLF+ VRPGSDL++FQLP NLP+SQLQ YGE VY
Sbjct: 15 PFSLEDEKDSEHTASNVIRKILSLFKTVRPGSDLTNFQLPPQLNLPRSQLQCYGEMVYSF 74
Query: 79 VGKDYLRRCAKGSDAVERFAAVVGWSISTTRPPIFGFAPYNPVLGETHHVSSGSLHVLLE 138
VG+D L C++ +ER +VV W+IST RP +FG +PYN VLGETHHVS+G ++V+ E
Sbjct: 75 VGQDLLGECSRRDLPIERLKSVVTWNISTLRPVVFGMSPYNSVLGETHHVSNGHINVIAE 134
Query: 139 QVSHRPPVSALHATDDDGEIELVWCQNPIPKFHGTSVEATVKGMRHVKLLKFSENYEIDC 198
QV H PPVSALHAT + I++ WCQ PKF GT V+ VKG R +KLL E YE+D
Sbjct: 135 QVVHHPPVSALHATHEQENIDVTWCQYFTPKFRGTHVDVEVKGKRVMKLLNHIETYEMDQ 194
Query: 199 PNLLIRLLPAPSAEWSGTVRIVCKESELEAELIYYRSNAFLG--LGGDPRCVKGKIFSSR 256
P L++R LPAP A W+G V+I C E++LEAEL + S++F+ G + R +KGKIF S
Sbjct: 195 PRLIMRFLPAPGAYWAGKVKIKCPETDLEAEL-HLISDSFIERFRGNNNRSIKGKIFESS 253
Query: 257 SGEIICEIDGHWDRIVSAKDAKTGKVSVLYDAESAIADLKTPVVRNQEGVSPSESVVVWG 316
SG + I GHWDR V AK+ KTG++ V+Y+A+ I LK P V+N E V+ SES +VW
Sbjct: 254 SGNQLYNIFGHWDRTVMAKNIKTGELEVIYNAKENITGLKPPTVKNLEEVTESESTMVWS 313
Query: 317 EVSDAILKKDWERSSQAKRRVEDTARRLDRERNDKGEVWIPKHFSLSQDKNGSWECSPLE 376
EVS+ ILKKDWER+ +AK VE+ R ++R GE W+PKHF + +D W+CSPL+
Sbjct: 314 EVSEGILKKDWERAREAKIVVEEKQRASLKQREASGESWVPKHFLVVKD-GKDWDCSPLQ 372
Query: 377 KSVPPAPIIV 386
+VPPAP+++
Sbjct: 373 PTVPPAPLVI 382
>AT5G57240.1 | chr5:23193449-23195303 FORWARD LENGTH=380
Length = 379
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/371 (52%), Positives = 252/371 (67%), Gaps = 5/371 (1%)
Query: 20 PLSLEGGLAAELRPANLVQRVLSLFRNVRPGSDLSHFQLPATFNLPKSQLQLYGEGVYCV 79
P SLE +E P NL+QR+LSLF+NVRPGSDL++FQLP NL +SQLQ YGE VY
Sbjct: 10 PFSLEDEKDSENTPPNLIQRILSLFKNVRPGSDLTNFQLPPQMNLARSQLQCYGEIVYSF 69
Query: 80 -GKDYLRRCAKGSDAVERFAAVVGWSISTTRPPIFGFAPYNPVLGETHHVSSGSLHVLLE 138
G D L C++ +ER A+V W IST RP IFG APYNPV+GETHHVS+G ++VL E
Sbjct: 70 DGHDLLGECSRRDKPIERMKAMVTWYISTLRPLIFGLAPYNPVIGETHHVSNGHINVLAE 129
Query: 139 QVSHRPPVSALHATDDDGEIELVWCQNPIPKFHGTSVEATVKGMRHVKLLKFSENYEIDC 198
Q+SH PPVSALHAT + ++++ CQ PKF G V+ VKG R VKLL E YE++
Sbjct: 130 QISHHPPVSALHATHEKENVDVLLCQYFTPKFRGAYVDVEVKGKRVVKLLNHKETYEMNQ 189
Query: 199 PNLLIRLLPAPSAEWSGTVRIVCKESELEAELIYYRSNAFLG--LGGDPRCVKGKIFSSR 256
P LL+ LPA A W+G + I C E+ L AEL S++FL G + R +KGKIF S
Sbjct: 190 PKLLMTFLPAMGAHWAGKIVIKCPETGLGAELQLL-SDSFLSRFTGNNKRAIKGKIFESS 248
Query: 257 SGEIICEIDGHWDRIVSAKDAKTGKVSVLYDAESAIADLKTPVVRNQEGVSPSESVVVWG 316
S + + EI GHWDR V+AK+ KTG++ V+Y A IA LKTP+V N + VS SES VVWG
Sbjct: 249 SRKQLYEISGHWDRTVTAKNTKTGQLEVIYKASENIAKLKTPIVENLQEVSESESAVVWG 308
Query: 317 EVSDAILKKDWERSSQAKRRVEDTARRLDRERNDKGEVWIPKHFSLSQDKNGSWECSPLE 376
EVS+ I+ +WE++ +AKR VE+ R R+R G+ WIPKHFS+++ W+C PL+
Sbjct: 309 EVSEGIVTNNWEKAREAKRDVEEKQRESLRKRKASGQSWIPKHFSVART-GKDWDCVPLQ 367
Query: 377 KSVPPAPIIVP 387
+VP API+VP
Sbjct: 368 PTVPRAPIVVP 378
>AT4G25860.1 | chr4:13147357-13149527 FORWARD LENGTH=387
Length = 386
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/370 (49%), Positives = 251/370 (67%), Gaps = 5/370 (1%)
Query: 20 PLSLEGGLAAELRPANLVQRVLSLFRNVRPGSDLSHFQLPATFNLPKSQLQLYGEGVYCV 79
P SLE +EL +++++++LSL + VRPGSDL++FQLP LP+S+LQ YGE +Y
Sbjct: 16 PFSLEDEKDSELTASSVIRKILSLIKTVRPGSDLTNFQLPPQLILPRSRLQCYGEMIYSF 75
Query: 80 G-KDYLRRCAKGSDAVERFAAVVGWSISTTRPPIFGFAPYNPVLGETHHVSSGSLHVLLE 138
G +D L C++ + +ER +VV W+IST RP + G +PYNP+LGETHHVS+G ++VL E
Sbjct: 76 GGQDLLGECSRRNIPIERLKSVVTWNISTLRPVVVGMSPYNPILGETHHVSNGYINVLTE 135
Query: 139 QVSHRPPVSALHATDDDGEIELVWCQNPIPKFHGTSVEATVKGMRHVKLLKFSENYEIDC 198
QV H PPVSALHAT + I++ WCQ PKF G V+ V G R +KLL E YE+D
Sbjct: 136 QVMHHPPVSALHATHEQENIDVTWCQYFTPKFRGAYVDVEVNGKRIMKLLHHKETYEMDQ 195
Query: 199 PNLLIRLLPAPSAEWSGTVRIVCKESELEAELIYYRSNAFLG--LGGDPRCVKGKIFSSR 256
P L+++ LPAP A W+G V+I C E++LEAEL + S++F+ G + R +KGKIF S
Sbjct: 196 PRLIMKFLPAPGAHWAGKVKIKCPETDLEAEL-HLISDSFIERFRGNNNRSIKGKIFESS 254
Query: 257 SGEIICEIDGHWDRIVSAKDAKTGKVSVLYDAESAIADLKTPVVRNQEGVSPSESVVVWG 316
SG + I GHWDR V AK+ KTG + V+Y+A I LK P V+N + V SES +VW
Sbjct: 255 SGNQLYNIFGHWDRTVMAKNLKTGGLEVIYNANENITGLKPPTVKNLQEVMESESTIVWS 314
Query: 317 EVSDAILKKDWERSSQAKRRVEDTARRLDRERNDKGEVWIPKHFSLSQDKNGSWECSPLE 376
EVS+ ILKKDWER+ +AK VE+ R ++R GE W+PKHFS+ +D W CSPL+
Sbjct: 315 EVSEGILKKDWERAREAKILVEEKQREALKQREASGESWVPKHFSVVKD-GKDWHCSPLQ 373
Query: 377 KSVPPAPIIV 386
+VP AP+++
Sbjct: 374 PTVPRAPLVI 383
>AT2G31030.1 | chr2:13206004-13207815 FORWARD LENGTH=490
Length = 489
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 150/350 (42%), Gaps = 42/350 (12%)
Query: 38 QRVLSLFRNVRP--GSDLSHFQLPATFNLPKSQLQLYGEGV-YCVGKDYLRRCAKGSDAV 94
++ +SL+ ++ G DL+ LP FN P S LQ E + Y D K + +
Sbjct: 122 EKSVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEDLEYSYLLDQASEWGKRGNNL 181
Query: 95 ERFAAVVGWSIS---TTRPPIFGFAPYNPVLGETHHVS--SGSLHVLLEQVSHRPPVSAL 149
R V +++S +T+ I P+NP+LGET+ L E+VSH P + A
Sbjct: 182 MRILNVAAFAVSGYASTKGRI--CKPFNPMLGETYEADYPDKGLRFFSEKVSHHPMIVAC 239
Query: 150 HATDDDGEIELVWCQ-NPIPKFHGTSVEATVKGMRHVKLLKFSENYEID----CPNLLIR 204
H DG W N KF G S++ G+ L+F + + ++
Sbjct: 240 HC---DGTGWKFWGDSNLKSKFWGRSIQLDPIGLL---TLQFDDGEIVQWSKVTTSIYNL 293
Query: 205 LLPAPSAEWSGTVRIVCKESELEAELIYYRSNAFLGLGGDPRCVKGKIFSSRSGEIICEI 264
+L + GT+ ++ E +L + + + + +P V+G I ++G+ + ++
Sbjct: 294 ILGKLYCDHYGTM-LIEGNGEYSCKLKFKKQSM---MDRNPHQVQG-IVEDKNGKTVAKL 348
Query: 265 DGHWDRIVSAKDAKTGKVSVLYDAESAIADLKTPVVRN--QEGVSPSESVVVWGEV---S 319
G WD + GK S + L+ P N + G++ +E E+ +
Sbjct: 349 FGKWDESMYYVMVNQGKESESHLLWKRNKPLENPTKYNLTRFGITLNELTPDLKEMLPPT 408
Query: 320 DAILKKD--------WERSSQAKRRVEDTARRLDRERNDKGEVWIPKHFS 361
D+ L+ D +E ++ K R+E R+ RE+ ++G W P FS
Sbjct: 409 DSRLRPDQRYLEKGEFEMGNREKLRLEQRQRQA-REKQERG--WKPTWFS 455
>AT5G02100.1 | chr5:413639-416016 FORWARD LENGTH=454
Length = 453
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
Query: 50 GSDL-SHFQLPATFNLPKSQLQLYGEGVYCVGKDYLRRCA-KGSDAVERFAAVVGWSIST 107
GSD+ S LP P + LQ E + YL A K D R W+IS
Sbjct: 78 GSDVTSMVTLPVIIFEPMTMLQKMAE---LMEYSYLLDMADKTEDPYMRMVYASSWAISV 134
Query: 108 TRPPIFGFAPYNPVLGETHHVSS-GSLHVLLEQVSHRPPVSALHATDDDGEIELVWCQNP 166
+ P+NP+LGET+ +++ ++ + EQV H PP+SA HA ++ + C +
Sbjct: 135 YYAYQRTWKPFNPILGETYEMTNHNGINFIAEQVCHHPPMSAGHAENEHFAYD---CTSK 191
Query: 167 I-PKFHGTSVEATVKGMRHVKL 187
+ KF G S++ G V L
Sbjct: 192 LKTKFLGNSIDVYPVGRTRVTL 213
>AT3G09300.1 | chr3:2858068-2860462 FORWARD LENGTH=459
Length = 458
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query: 50 GSDL-SHFQLPATFNLPKSQLQLYGEGVYCVGKDYLRRCAKGSDAVERFAAVVGWSISTT 108
GSD+ S LP P + LQ E + L K D R W+IS
Sbjct: 83 GSDVTSMVTLPVIIFEPMTMLQKMAELMEY--SHLLDMADKTEDPYLRMVYASSWAISVY 140
Query: 109 RPPIFGFAPYNPVLGETHHVSS-GSLHVLLEQVSHRPPVSALHATDDDGEIELVWCQNPI 167
+ P+NP+LGET+ +++ ++ + EQVSH PP+SA HA ++ + C + +
Sbjct: 141 YAFQRTWKPFNPILGETYEMANYNGVNFISEQVSHHPPMSAGHAENEHFTYD---CTSKL 197
Query: 168 -PKFHGTSVEATVKGMRHVKL 187
KF G S++ G V L
Sbjct: 198 KTKFLGNSIDVYPVGRTRVTL 218
>AT5G59420.1 | chr5:23961731-23964623 FORWARD LENGTH=458
Length = 457
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 50 GSDL-SHFQLPATFNLPKSQLQLYGEGV-YCVGKDYLRRCAKGSDAVERFAAVVGWSIST 107
GSD+ S LP P + LQ E + Y D C D R W+IS
Sbjct: 78 GSDITSMVTLPVVIFEPMTMLQKMAEIMEYSHLLDQADEC---EDPYLRLVYASSWAISV 134
Query: 108 TRPPIFGFAPYNPVLGETHH-VSSGSLHVLLEQVSHRPPVSALHATDD 154
+ P+NP+LGET+ V+ G + + EQVSH PP+SA HA ++
Sbjct: 135 YYAFQRTWKPFNPILGETYEMVNHGGISFISEQVSHHPPMSAGHAENE 182
>AT4G08180.1 | chr4:5169727-5173360 FORWARD LENGTH=815
Length = 814
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 106/253 (41%), Gaps = 37/253 (14%)
Query: 50 GSDLSHFQLPATFNLPKSQLQLYGEGV-YCVGKDYLRRCAKGSDAVERFAAVVGWSISTT 108
G DL+ LP FN P S LQ E + Y D K +++ R V +++S
Sbjct: 447 GKDLTKVCLPVYFNEPLSSLQKCFEDLEYSYLLDRAFEYGKRGNSLMRILNVAAFAVS-- 504
Query: 109 RPPIFGFA--------PYNPVLGETHHVS--SGSLHVLLEQVSHRPPVSALHATDDDGEI 158
G+A P+NP+LGET+ L E+VSH P V A H DG
Sbjct: 505 -----GYASTEGRICKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHC---DGTG 556
Query: 159 ELVWCQNPI-PKFHGTSVEATVKGMRHVKLLKFSE----NYEIDCPNLLIRLLPAPSAEW 213
W + + KF G S++ G V L+F + + ++ +L +
Sbjct: 557 WKFWGDSNLRSKFWGRSIQLDPVG---VLTLQFDDGEILQWSKVTTSIYNLILGKLYCDH 613
Query: 214 SGTVRIVCKESELEAELIYYRSNAFLGLGGDPRCVKGKIFSSRSGEIICEIDGHWD---R 270
GT+RI +E +L + + + +P V G I ++SG+ + + G WD
Sbjct: 614 YGTMRIE-GSAEYSCKLKFKEQSI---IDRNPHQVHG-IVQNKSGKTVATMFGKWDESIH 668
Query: 271 IVSAKDAKTGKVS 283
V+ + GK+S
Sbjct: 669 FVTGDCSGKGKLS 681
>AT2G31020.1 | chr2:13201668-13204682 FORWARD LENGTH=761
Length = 760
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 34/250 (13%)
Query: 50 GSDLSHFQLPATFNLPKSQLQLYGEGV-YCVGKDYLRRCAKGSDAVERFAAVVGWSISTT 108
G DL+ LP FN P S LQ E + Y D K + + R V +++S
Sbjct: 403 GKDLTKVCLPVYFNEPLSSLQKCFEDLEYSYLLDQASEWGKRGNNLMRILNVAAFAVS-- 460
Query: 109 RPPIFGFA--------PYNPVLGETHHVS--SGSLHVLLEQVSHRPPVSALHATDDDGEI 158
G+A P+NP+LGET+ L E+VSH P + A H DG
Sbjct: 461 -----GYASTEGRICKPFNPMLGETYEADYPDKGLRFFSEKVSHHPMIVACHC---DGTG 512
Query: 159 ELVWCQ-NPIPKFHGTSVEATVKGMRHVKLLKFSENYEID----CPNLLIRLLPAPSAEW 213
W N KF G S++ G+ L+F + + ++ +L +
Sbjct: 513 WKFWGDSNLKSKFWGRSIQLDPIGLL---TLQFDDGEIVQWSKVTTSIYNLILGKLYCDH 569
Query: 214 SGTVRIVCKESELEAELIYYRSNAFLGLGGDPRCVKGKIFSSRSGEIICEIDGHWDRIVS 273
GT++I E +L + + + +P V+G I ++G+ + + G WD +
Sbjct: 570 YGTMKIEGN-GEYSCKLKFKEQSM---IDRNPHQVQG-IVEDKNGKTVARLFGKWDESIH 624
Query: 274 AKDAKTGKVS 283
GKV+
Sbjct: 625 YVMVDQGKVN 634
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.134 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,919,876
Number of extensions: 389885
Number of successful extensions: 950
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 948
Number of HSP's successfully gapped: 9
Length of query: 388
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 288
Effective length of database: 8,364,969
Effective search space: 2409111072
Effective search space used: 2409111072
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)