BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0513300 Os08g0513300|AK068851
         (389 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G18240.1  | chr3:6255810-6257695 FORWARD LENGTH=420            429   e-120
AT4G21460.1  | chr4:11428530-11430390 FORWARD LENGTH=416          416   e-116

>AT3G18240.1 | chr3:6255810-6257695 FORWARD LENGTH=420
          Length = 419

 Score =  429 bits (1103), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 207/332 (62%), Positives = 259/332 (78%), Gaps = 2/332 (0%)

Query: 51  VPNKELKRRLETYYGVDDEAELPSVTEAVLERKLADVHSETDDELIEELRSKPLPE-VRD 109
           V NKELK R+E Y+   +E  LP V EA+L+R+L D H+ETDDEL+E++ S P  + V+D
Sbjct: 77  VSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLVDKHAETDDELLEKIESLPFKDDVKD 136

Query: 110 RDFESDFEEMHDTDEELDNLYNARQYVEKKIKSDEFFNMDDDKWNKMIKKAVDNGHLGNM 169
            DFESDFEE H TDEEL++LYN+ +YV +K++ +EFFNMDD KW+ MI++ + +G L + 
Sbjct: 137 EDFESDFEEAHSTDEELEDLYNSPEYVAEKMRKNEFFNMDDKKWDHMIREGIQHGCLTDT 196

Query: 170 NECENILEDMLHWDKLLPDEIKKKVEAKFNELGDMCEKGELEPEQAYELFKEFEDKMVSE 229
            ECE ILEDML WD+LLPD++KKKVEAKFNELGDMCE+GE+E E AYELFKEFED+MV +
Sbjct: 197 KECEEILEDMLKWDQLLPDDLKKKVEAKFNELGDMCERGEIEAEAAYELFKEFEDEMVIQ 256

Query: 230 CTELMEAENPTDVDEFSKMENKSVKLDDPPGEGPVLRWESRIVFAPGGDAWHPKNRKVKL 289
             + MEAE P    E +   +++  LDDPPG+GP+LRW+SRIVFAPGGDAWHPKNRKVK+
Sbjct: 257 YGDQMEAEGPPQFGE-TDASDRNTDLDDPPGKGPILRWQSRIVFAPGGDAWHPKNRKVKM 315

Query: 290 SVTVKELGLSRHAFRRLREVVGNRYNSGKDELTITSERFEHREENRKDCLRTLYAVVEXX 349
           SVTVKELGLS+H  +RLRE+VG RY+SGKDELTITSERFEHREENRKDCLRTLY ++E  
Sbjct: 316 SVTVKELGLSKHQAKRLRELVGKRYHSGKDELTITSERFEHREENRKDCLRTLYGLIEEA 375

Query: 350 XXXXXXXXXXXXXYVKNRLKANAQFMERLKVK 381
                        YVK RL+AN  FM++L+ K
Sbjct: 376 GKANKIAEDIRTSYVKQRLRANPAFMQKLQAK 407



>AT4G21460.1 | chr4:11428530-11430390 FORWARD LENGTH=416
          Length = 415

 Score =  416 bits (1069), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/332 (60%), Positives = 255/332 (76%), Gaps = 2/332 (0%)

Query: 51  VPNKELKRRLETYYGVDDEAELPSVTEAVLERKLADVHSETDDELIEELRSKPLPE-VRD 109
           V NKELK R++  +   +E  LP V EA+L+R+L D H+ETDDEL+E++ S P  + V+D
Sbjct: 73  VSNKELKSRIDKSFNEGNEDALPGVIEALLQRRLVDKHAETDDELMEKIESLPFKDDVKD 132

Query: 110 RDFESDFEEMHDTDEELDNLYNARQYVEKKIKSDEFFNMDDDKWNKMIKKAVDNGHLGNM 169
            DFESDFEE H TDEEL++LYN+ +YV +K++  EFFNMDD+KW+ MI++ + +G L + 
Sbjct: 133 EDFESDFEEAHSTDEELEDLYNSPEYVAEKMRKKEFFNMDDNKWDHMIREGIQHGCLTDT 192

Query: 170 NECENILEDMLHWDKLLPDEIKKKVEAKFNELGDMCEKGELEPEQAYELFKEFEDKMVSE 229
            +CE ILEDML WD+LLPD++KKKVEAKFNELGDMCE+GE+E E AYELFKEFED+MV +
Sbjct: 193 KQCEEILEDMLKWDQLLPDDLKKKVEAKFNELGDMCERGEIEAEAAYELFKEFEDEMVIQ 252

Query: 230 CTELMEAENPTDVDEFSKMENKSVKLDDPPGEGPVLRWESRIVFAPGGDAWHPKNRKVKL 289
             + MEAE P    E +   +++  LDDP G+GP+LRW+SRIVFAPGGDAWHPKNRKVK+
Sbjct: 253 YGDQMEAEGPPQFGE-TDTSDRNTDLDDPSGKGPILRWQSRIVFAPGGDAWHPKNRKVKM 311

Query: 290 SVTVKELGLSRHAFRRLREVVGNRYNSGKDELTITSERFEHREENRKDCLRTLYAVVEXX 349
           SVTVKELGLS H  +RLRE+VG RY+SGKDELTIT ERFEHREENRKDCLRTLY ++E  
Sbjct: 312 SVTVKELGLSNHQAKRLRELVGKRYHSGKDELTITCERFEHREENRKDCLRTLYGLIEEA 371

Query: 350 XXXXXXXXXXXXXYVKNRLKANAQFMERLKVK 381
                        YVK RL+A+  FM++L+ K
Sbjct: 372 GKANKIAEDIRTSYVKQRLRASPAFMQKLQAK 403



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.314    0.133    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,016,392
Number of extensions: 366793
Number of successful extensions: 1320
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1316
Number of HSP's successfully gapped: 3
Length of query: 389
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 289
Effective length of database: 8,364,969
Effective search space: 2417476041
Effective search space used: 2417476041
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 113 (48.1 bits)