BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0509600 Os08g0509600|AK107191
(417 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G42200.1 | chr2:17587601-17589451 FORWARD LENGTH=376 148 5e-36
AT3G57920.1 | chr3:21444450-21445852 REVERSE LENGTH=355 134 1e-31
AT1G69170.1 | chr1:26005626-26007041 FORWARD LENGTH=406 125 5e-29
AT2G47070.1 | chr2:19337144-19340552 FORWARD LENGTH=882 125 6e-29
AT3G60030.1 | chr3:22165856-22169410 REVERSE LENGTH=928 124 1e-28
AT1G02065.1 | chr1:365625-367149 FORWARD LENGTH=334 122 3e-28
AT2G33810.1 | chr2:14305342-14305828 FORWARD LENGTH=132 121 6e-28
AT1G27370.1 | chr1:9505454-9506997 REVERSE LENGTH=397 119 4e-27
AT5G43270.2 | chr5:17360527-17362143 REVERSE LENGTH=420 117 8e-27
AT1G20980.1 | chr1:7325042-7328933 FORWARD LENGTH=1036 117 1e-26
AT1G27360.1 | chr1:9502139-9503715 FORWARD LENGTH=394 116 2e-26
AT1G76580.1 | chr1:28734600-28738451 FORWARD LENGTH=989 116 2e-26
AT5G50670.1 | chr5:20615897-20617133 REVERSE LENGTH=360 114 7e-26
AT5G50570.1 | chr5:20582555-20583791 REVERSE LENGTH=360 114 7e-26
AT3G15270.1 | chr3:5140624-5141256 REVERSE LENGTH=182 113 2e-25
AT1G53160.2 | chr1:19806478-19807080 FORWARD LENGTH=175 109 3e-24
AT5G18830.3 | chr5:6276116-6280362 FORWARD LENGTH=819 99 3e-21
>AT2G42200.1 | chr2:17587601-17589451 FORWARD LENGTH=376
Length = 375
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 80/98 (81%), Gaps = 4/98 (4%)
Query: 103 RCQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKR 162
RCQVEGCG DL+ K YY RH+VC +HSK P+V VAG+EQRFCQQCSRFH LPEFD KR
Sbjct: 73 RCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQLPEFDLEKR 132
Query: 163 SCRRRLAGHNERRRRPQ----TPLASRYGRLAASVGEH 196
SCRRRLAGHNERRR+PQ + LASRYGR+A S+ E+
Sbjct: 133 SCRRRLAGHNERRRKPQPASLSVLASRYGRIAPSLYEN 170
>AT3G57920.1 | chr3:21444450-21445852 REVERSE LENGTH=355
Length = 354
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 104/200 (52%), Gaps = 36/200 (18%)
Query: 103 RCQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKR 162
RCQVEGC DLS +K YY RHKVC +HSK+ +V+V+GL QRFCQQCSRFH L EFD KR
Sbjct: 58 RCQVEGCRMDLSNVKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQQCSRFHQLSEFDLEKR 117
Query: 163 SCRRRLAGHNERRRRPQTPLA---SRYGRLAASVGEHRRFRSFTLDFSYPRVPSSVRNAW 219
SCRRRLA HNERRR+PQ A S Y R+A S+ + P S+ R+
Sbjct: 118 SCRRRLACHNERRRKPQPTTALFTSHYSRIAPSLYGNPNAAMIKSVLGDPTAWSTARSVM 177
Query: 220 PAIQPGDRISGGIQW---HRNVAPHGHSSAVAGYGANTYXXXXXXXXXPPVFAGPNLPPG 276
+PG ++ H NV HG SS P N
Sbjct: 178 Q--RPGPWQINPVRETHPHMNVLSHGSSSFTTC----------------PEMINNN---- 215
Query: 277 GCLAGVGAATDSSCALSLLS 296
+TDSSCALSLLS
Sbjct: 216 --------STDSSCALSLLS 227
>AT1G69170.1 | chr1:26005626-26007041 FORWARD LENGTH=406
Length = 405
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 60/75 (80%)
Query: 104 CQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKRS 163
CQV GC DLS K+Y+ RH+VC HSK V+V GLEQRFCQQCSRFH L EFD GKRS
Sbjct: 124 CQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKRS 183
Query: 164 CRRRLAGHNERRRRP 178
CRRRLAGHNERRR+P
Sbjct: 184 CRRRLAGHNERRRKP 198
>AT2G47070.1 | chr2:19337144-19340552 FORWARD LENGTH=882
Length = 881
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 62/74 (83%)
Query: 104 CQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKRS 163
CQVE C ADLS +K+Y+ RHKVC MHSKA V G+ QRFCQQCSRFHLL EFD+GKRS
Sbjct: 106 CQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFDEGKRS 165
Query: 164 CRRRLAGHNERRRR 177
CRRRLAGHN+RRR+
Sbjct: 166 CRRRLAGHNKRRRK 179
>AT3G60030.1 | chr3:22165856-22169410 REVERSE LENGTH=928
Length = 927
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 64/74 (86%)
Query: 104 CQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKRS 163
CQV+ CGADLS +K+Y+ RHKVC +HSKA +V G+ QRFCQQCSRFH+L EFD+GKRS
Sbjct: 127 CQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGKRS 186
Query: 164 CRRRLAGHNERRRR 177
CRRRLAGHN+RRR+
Sbjct: 187 CRRRLAGHNKRRRK 200
>AT1G02065.1 | chr1:365625-367149 FORWARD LENGTH=334
Length = 333
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 60/75 (80%)
Query: 103 RCQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKR 162
RCQ EGC ADLS K+Y+ RHKVC HSKA VV AGL QRFCQQCSRFHLL EFD GKR
Sbjct: 187 RCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFHLLSEFDNGKR 246
Query: 163 SCRRRLAGHNERRRR 177
SCR+RLA HN RRR+
Sbjct: 247 SCRKRLADHNRRRRK 261
>AT2G33810.1 | chr2:14305342-14305828 FORWARD LENGTH=132
Length = 131
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 61/77 (79%)
Query: 104 CQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKRS 163
CQVE C AD+S K Y+ RHKVC H+KAP V ++GL QRFCQQCSRFH L EFD+ KRS
Sbjct: 54 CQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFDEAKRS 113
Query: 164 CRRRLAGHNERRRRPQT 180
CRRRLAGHNERRR+ T
Sbjct: 114 CRRRLAGHNERRRKSTT 130
>AT1G27370.1 | chr1:9505454-9506997 REVERSE LENGTH=397
Length = 396
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 64/77 (83%)
Query: 103 RCQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKR 162
RCQ++GC DLS K+Y+ +H+VC HSK P+VVV+GLE+RFCQQCSRFH + EFD+ KR
Sbjct: 175 RCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFDEKKR 234
Query: 163 SCRRRLAGHNERRRRPQ 179
SCR+RL+ HN RRR+PQ
Sbjct: 235 SCRKRLSHHNARRRKPQ 251
>AT5G43270.2 | chr5:17360527-17362143 REVERSE LENGTH=420
Length = 419
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 62/76 (81%)
Query: 104 CQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKRS 163
CQVEGC DLS K+Y+ +H++C HSK P+VVV+G+E+RFCQQCSRFH L EFD+ KRS
Sbjct: 169 CQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKKRS 228
Query: 164 CRRRLAGHNERRRRPQ 179
CRRRL+ HN RRR+P
Sbjct: 229 CRRRLSDHNARRRKPN 244
>AT1G20980.1 | chr1:7325042-7328933 FORWARD LENGTH=1036
Length = 1035
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 60/78 (76%)
Query: 104 CQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKRS 163
CQV+ C DLS K+Y+ RHKVC +HSKA + +V QRFCQQCSRFHLL EFD+GKRS
Sbjct: 120 CQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRS 179
Query: 164 CRRRLAGHNERRRRPQTP 181
CRRRLAGHN RRR+ P
Sbjct: 180 CRRRLAGHNRRRRKTTQP 197
>AT1G27360.1 | chr1:9502139-9503715 FORWARD LENGTH=394
Length = 393
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 62/77 (80%)
Query: 103 RCQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKR 162
RCQ++GC DLS K Y+ +HKVC HSK P+V V+GLE+RFCQQCSRFH + EFD+ KR
Sbjct: 174 RCQIDGCELDLSSAKGYHRKHKVCEKHSKCPKVSVSGLERRFCQQCSRFHAVSEFDEKKR 233
Query: 163 SCRRRLAGHNERRRRPQ 179
SCR+RL+ HN RRR+PQ
Sbjct: 234 SCRKRLSHHNARRRKPQ 250
>AT1G76580.1 | chr1:28734600-28738451 FORWARD LENGTH=989
Length = 988
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 60/77 (77%)
Query: 103 RCQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKR 162
+CQV+ C DLS K+Y+ RHKVC +HSKA + +V QRFCQQCSRFHLL EFD+GKR
Sbjct: 81 KCQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKR 140
Query: 163 SCRRRLAGHNERRRRPQ 179
SCRRRL GHN RRR+ Q
Sbjct: 141 SCRRRLDGHNRRRRKTQ 157
>AT5G50670.1 | chr5:20615897-20617133 REVERSE LENGTH=360
Length = 359
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 59/76 (77%)
Query: 104 CQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKRS 163
C V+GC +D S + Y+ RHKVC +HSK P V + G +QRFCQQCSRFH L EFD+GKRS
Sbjct: 101 CLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRS 160
Query: 164 CRRRLAGHNERRRRPQ 179
CR+RL GHN RRR+PQ
Sbjct: 161 CRKRLDGHNRRRRKPQ 176
>AT5G50570.1 | chr5:20582555-20583791 REVERSE LENGTH=360
Length = 359
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 59/76 (77%)
Query: 104 CQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKRS 163
C V+GC +D S + Y+ RHKVC +HSK P V + G +QRFCQQCSRFH L EFD+GKRS
Sbjct: 101 CLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRS 160
Query: 164 CRRRLAGHNERRRRPQ 179
CR+RL GHN RRR+PQ
Sbjct: 161 CRKRLDGHNRRRRKPQ 176
>AT3G15270.1 | chr3:5140624-5141256 REVERSE LENGTH=182
Length = 181
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 59/74 (79%)
Query: 104 CQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKRS 163
CQV+ C +L+ K YY RH+VC +H+KA VAG+ QRFCQQCSRFH LPEFD+ KRS
Sbjct: 63 CQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRS 122
Query: 164 CRRRLAGHNERRRR 177
CRRRLAGHNERRR+
Sbjct: 123 CRRRLAGHNERRRK 136
>AT1G53160.2 | chr1:19806478-19807080 FORWARD LENGTH=175
Length = 174
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 59/75 (78%)
Query: 104 CQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKRS 163
CQV+ C AD+ K Y+ RHKVC +H+KA V ++GL QRFCQQCSRFH L EFD+ KRS
Sbjct: 54 CQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRS 113
Query: 164 CRRRLAGHNERRRRP 178
CRRRLAGHNERRR+
Sbjct: 114 CRRRLAGHNERRRKS 128
>AT5G18830.3 | chr5:6276116-6280362 FORWARD LENGTH=819
Length = 818
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 56/75 (74%)
Query: 103 RCQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKR 162
RCQV C AD+S +K Y+ RH+VC + A VV+ G +R+CQQC +FHLLP+FD+GKR
Sbjct: 137 RCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKR 196
Query: 163 SCRRRLAGHNERRRR 177
SCRR+L HN RR+R
Sbjct: 197 SCRRKLERHNNRRKR 211
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,652,315
Number of extensions: 313828
Number of successful extensions: 667
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 666
Number of HSP's successfully gapped: 17
Length of query: 417
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 316
Effective length of database: 8,337,553
Effective search space: 2634666748
Effective search space used: 2634666748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)