BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0502800 Os08g0502800|AK105444
(406 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G22360.1 | chr4:11807811-11809660 FORWARD LENGTH=386 261 6e-70
AT3G19080.1 | chr3:6596082-6598667 FORWARD LENGTH=463 184 6e-47
AT1G49520.1 | chr1:18329736-18331691 FORWARD LENGTH=373 133 2e-31
AT2G14880.1 | chr2:6393686-6394841 REVERSE LENGTH=142 79 4e-15
AT2G35605.1 | chr2:14946161-14947027 FORWARD LENGTH=110 75 5e-14
AT3G03590.1 | chr3:865341-866669 REVERSE LENGTH=144 69 3e-12
AT4G34290.1 | chr4:16410883-16412122 FORWARD LENGTH=145 69 6e-12
AT1G31760.1 | chr1:11372602-11373414 REVERSE LENGTH=113 60 3e-09
AT3G48600.2 | chr3:18010168-18011363 REVERSE LENGTH=229 56 4e-08
AT4G26810.1 | chr4:13492247-13492649 REVERSE LENGTH=107 52 6e-07
AT5G14170.1 | chr5:4568696-4570444 REVERSE LENGTH=535 49 5e-06
>AT4G22360.1 | chr4:11807811-11809660 FORWARD LENGTH=386
Length = 385
Score = 261 bits (666), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 153/212 (72%), Gaps = 18/212 (8%)
Query: 201 KESASTGVKRRGGPGGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRNNLQDPNNK 260
KESA G KR+GGPGGLNKVC VSPEL+ +VGEP + RTEIV+QLWAYIR+NNLQDP+NK
Sbjct: 181 KESAPAGTKRKGGPGGLNKVCRVSPELEVVVGEPALPRTEIVRQLWAYIRKNNLQDPSNK 240
Query: 261 RKIICNDELRLVFETDSTDMFKMNKLLAKHIRPLEAKKDSNRDSK----------KLKPV 310
RKIIC+D LR+VFETD TDMFKMNKLLAKHI PL+ KDS + K +P+
Sbjct: 241 RKIICDDALRVVFETDCTDMFKMNKLLAKHILPLDPSKDSGQAKKAKTEVETKTETTEPI 300
Query: 311 DSEPISPAETDVNQLPIILSDALASFFGTGEKEMPSSEAVKRVWDHIKSNNLEDPANPTM 370
S IS T LS+ L FFGTGE EM E ++RVW++IK NNLEDP NP
Sbjct: 301 SSTAISSTVT--------LSEPLGKFFGTGETEMADEEIIRRVWEYIKLNNLEDPVNPMA 352
Query: 371 ILCDSKLKQLFGCESLTAVSVSELLSQHLFKQ 402
I CD KL+ L GCES++AV ++E+L +H++KQ
Sbjct: 353 IQCDEKLRDLLGCESISAVGINEMLRRHMYKQ 384
>AT3G19080.1 | chr3:6596082-6598667 FORWARD LENGTH=463
Length = 462
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 127/204 (62%), Gaps = 12/204 (5%)
Query: 209 KRRGGPGGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRNNLQDPNNKRKIICNDE 268
KR+GG GG KVC +SPELQA G +ARTE+VK LW YI+ NNLQDPN+KR IIC++
Sbjct: 257 KRKGG-GGFAKVCSLSPELQAFTGVTELARTEVVKLLWKYIKENNLQDPNDKRSIICDES 315
Query: 269 LRLVFETDSTDMFKMNKLLAKHIRPLE------AKKDSNRDSKKLKPVDSEPISPAETDV 322
R +F +S +MF+MNK L KHI PLE S ++ K+ D + P E D
Sbjct: 316 FRSLFPVESINMFQMNKQLTKHIWPLEDNAGESVSSKSPKNGKQKMESDGDSEEPNEKDK 375
Query: 323 NQ-----LPIILSDALASFFGTGEKEMPSSEAVKRVWDHIKSNNLEDPANPTMILCDSKL 377
Q P+ LSDAL F G GE + ++ VKR+W++I N+L+DP++ ++CD KL
Sbjct: 376 KQKKEVLAPLPLSDALVKFLGDGENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDEKL 435
Query: 378 KQLFGCESLTAVSVSELLSQHLFK 401
K+LF +S SVS+LL+ H K
Sbjct: 436 KELFEVDSFEDTSVSKLLTNHFIK 459
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 209 KRRGGPGGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRNNLQDPNNKRKIICNDE 268
K+RGG G+ KV +SP+L+ +VG + RTE+VK++WAYIR +LQDP ++RKI+C++
Sbjct: 110 KKRGG--GITKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIREKDLQDPKDRRKIVCDEL 167
Query: 269 LRLVFETDSTDMFKMNKLLAKHIRPL 294
L +F + +MF+MNK L KHI PL
Sbjct: 168 LHSLFRVKTINMFQMNKALTKHIWPL 193
>AT1G49520.1 | chr1:18329736-18331691 FORWARD LENGTH=373
Length = 372
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 122/240 (50%), Gaps = 55/240 (22%)
Query: 208 VKRRGGPGGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRNNLQDPNNKRKIICND 267
K+RGG G NK+C +SP+L+ +G +ARTE+VK++WAYIR ++LQDP N+R I+C++
Sbjct: 95 AKKRGG--GFNKICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQDPTNRRNILCDE 152
Query: 268 ELRLVFETDSTDMFKMNKLLAKHIRPLEAKKDSNRDSKKLKPVDSEPISPAETDVNQLPI 327
L +F + +MF+MNK LAKHI L D + K +K D + S E D + I
Sbjct: 153 SLHSLFRVKTINMFQMNKALAKHIWAL---NDGDGCFKNVKEEDVDETS-GERDEKDVKI 208
Query: 328 I-----------------------------------------------LSDALASFFGTG 340
LS L +F GT
Sbjct: 209 EEALENNEEESREEEDRSVRKRKRKKRKPAKSEEKPKKKGGGFTKVCSLSPELQAFTGT- 267
Query: 341 EKEMPSSEAVKRVWDHIKSNNLEDPANPTMILCDSKLKQLFGCESLTAVSVSELLSQHLF 400
++ +E VK +W +IK NNL+DP++ I+CD L+ LF ES+ +++ L++H++
Sbjct: 268 -PQLARTEVVKMLWKYIKENNLQDPSDKRTIICDESLRSLFPVESINMFQMNKQLAKHIW 326
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Query: 209 KRRGGPGGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRNNLQDPNNKRKIICNDE 268
K++GG G KVC +SPELQA G P +ARTE+VK LW YI+ NNLQDP++KR IIC++
Sbjct: 245 KKKGG--GFTKVCSLSPELQAFTGTPQLARTEVVKMLWKYIKENNLQDPSDKRTIICDES 302
Query: 269 LRLVFETDSTDMFKMNKLLAKHIRPL 294
LR +F +S +MF+MNK LAKHI PL
Sbjct: 303 LRSLFPVESINMFQMNKQLAKHIWPL 328
>AT2G14880.1 | chr2:6393686-6394841 REVERSE LENGTH=142
Length = 141
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 196 AAASKKESASTGVKRRGGPGGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRNNLQ 255
A S ES+ + P G+ K VSPE+Q IV P +ART+ +K++WAYI+ ++LQ
Sbjct: 44 AVTSATESSEPTATNKRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQ 103
Query: 256 DPNNKRKIICNDELRLVFE-TDSTDMFKMNKLLAKHI 291
DP NKR+I+C+++L+ +FE D ++ KL+ H
Sbjct: 104 DPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHF 140
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 17/88 (19%)
Query: 314 PISPAETDVNQLPIILSDALASFFGTGEKEMPSSEAVKRVWDHIKSNNLEDPANPTMILC 373
P+SP D+ +LP E+ ++A+KR+W +IK ++L+DP N ILC
Sbjct: 70 PVSPEMQDIVELP----------------EIARTQALKRIWAYIKEHDLQDPQNKREILC 113
Query: 374 DSKLKQLF-GCESLTAVSVSELLSQHLF 400
D KLK++F G + + + +++L+ H
Sbjct: 114 DEKLKKIFEGRDRVGFLEIAKLIGPHFL 141
>AT2G35605.1 | chr2:14946161-14947027 FORWARD LENGTH=110
Length = 109
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 201 KESASTGVKRRGGPGGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRNNLQDPNNK 260
K ++STG K G+ KV VS L +GE ++RT VK++W YI+ NNLQ+P NK
Sbjct: 14 KAASSTGAKTGRQGTGILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNLQNPVNK 73
Query: 261 RKIICNDELRLVFE-TDSTDMFKMNKLLAKHI 291
R+I+C+++L+ +F D+ +++KLL++H
Sbjct: 74 REILCDEQLKTIFSGKDTVGFLEISKLLSQHF 105
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 329 LSDALASFFGTGEKEMPSSEAVKRVWDHIKSNNLEDPANPTMILCDSKLKQLF-GCESLT 387
+S LA+F G E E+ + AVK++W++IK NNL++P N ILCD +LK +F G +++
Sbjct: 36 VSKPLANFIG--ENEVSRTTAVKKIWEYIKLNNLQNPVNKREILCDEQLKTIFSGKDTVG 93
Query: 388 AVSVSELLSQHL 399
+ +S+LLSQH
Sbjct: 94 FLEISKLLSQHF 105
>AT3G03590.1 | chr3:865341-866669 REVERSE LENGTH=144
Length = 143
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 216 GLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRNNLQDPNNKRKIICNDELRLVFE- 274
G+ KV VSP L +G +RT+ +K +W YI+ ++LQ+P +KR+I C++ L+L+FE
Sbjct: 63 GIFKVTPVSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEG 122
Query: 275 TDSTDMFKMNKLLAKHI 291
D +++KLL+ H
Sbjct: 123 KDKVGFLEISKLLSPHF 139
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 329 LSDALASFFGTGEKEMPSSEAVKRVWDHIKSNNLEDPANPTMILCDSKLKQLF-GCESLT 387
+S LA F GTGE ++A+K +W +IKS++L++PA+ I CD LK +F G + +
Sbjct: 70 VSPVLAQFLGTGETSR--TDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEGKDKVG 127
Query: 388 AVSVSELLSQHLFK 401
+ +S+LLS H K
Sbjct: 128 FLEISKLLSPHFVK 141
>AT4G34290.1 | chr4:16410883-16412122 FORWARD LENGTH=145
Length = 144
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 214 PGGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRNNLQDPNNKRKIICNDELRLVF 273
P G+ K VS +Q +VG P + RT+ +K++WAYI+ ++LQDP NKR I+C+++L+ +F
Sbjct: 65 PRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIF 124
Query: 274 E-TDSTDMFKMNKLLAKHI 291
E + ++ KL+ H
Sbjct: 125 EGKERVGFLEIAKLIGPHF 143
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 340 GEKEMPSSEAVKRVWDHIKSNNLEDPANPTMILCDSKLKQLF-GCESLTAVSVSELLSQH 398
G E+P ++A+KR+W +IK ++L+DP N ILCD KLK++F G E + + +++L+ H
Sbjct: 83 GVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGFLEIAKLIGPH 142
Query: 399 LF 400
Sbjct: 143 FL 144
>AT1G31760.1 | chr1:11372602-11373414 REVERSE LENGTH=113
Length = 112
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 329 LSDALASFFGTGEKEMPSSEAVKRVWDHIKSNNLEDPANPTMILCDSKLKQLF-GCESLT 387
+S LASF GE+E+ A+K+VW+++K +NL++PAN I CD KLK +F G + +
Sbjct: 39 VSQQLASF--AGERELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDGKDKVG 96
Query: 388 AVSVSELLSQHL 399
+ +LLS H
Sbjct: 97 ITEIMKLLSPHF 108
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 216 GLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRNNLQDPNNKRKIICNDELRLVFE- 274
G+ K VS +L + GE + R +K++W Y++ +NLQ+P NK++I C+D+L+ +F+
Sbjct: 32 GIFKTRPVSQQLASFAGERELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDG 91
Query: 275 TDSTDMFKMNKLLAKHI 291
D + ++ KLL+ H
Sbjct: 92 KDKVGITEIMKLLSPHF 108
>AT3G48600.2 | chr3:18010168-18011363 REVERSE LENGTH=229
Length = 228
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 197 AASKKESASTGVKRRGGPGGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRNNLQD 256
A + + GV RRGG ++K+ VS L VG+ ++ + ++++ Y +NL +
Sbjct: 18 AVTNATATGAGVDRRGG---IHKIFPVSESLARFVGQSEVSFSTAMEKVEQYTDDHNLWN 74
Query: 257 PNNKRKIICNDELRLVFETDS--TDMFKMNKLLAKH---IRPLEAKKDSNRDSKKLKPVD 311
P N +I+C+D L+ +F+ + +M +LL +H +R + A K+K
Sbjct: 75 PENIEEILCDDNLKTIFDGQDKVVGVREMTELLLRHFPNVRTMSA---------KVKATG 125
Query: 312 SEPISPAETDVNQLPIILSDALASFFGTGEKEMPSSEAVKRVWDHIKSNNLEDPANPTM- 370
I + N + + +S+ LA F G+ E+ A++++ D+ + L D +
Sbjct: 126 GGTIE--KWGFNDI-VKVSEPLARF--VGQSEISFDAALRKLLDYAFDHKLVDEGVTLLE 180
Query: 371 -----------ILCDSKLKQLF-GCESLTAVSVSELLSQHL 399
I CD LK + G + + +S LL QH
Sbjct: 181 FPWITKCSKWRIRCDDTLKTILDGKDKVGNKELSSLLMQHF 221
>AT4G26810.1 | chr4:13492247-13492649 REVERSE LENGTH=107
Length = 106
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 215 GGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRNNLQDPNNKRKIICNDELR-LVF 273
G L + + L+ VG+ ++R ++W+YI+ NNLQDP NK +IC+++L+ ++
Sbjct: 18 GNLIDLVNLPSTLRNFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNVVICDEKLKSILL 77
Query: 274 ETDSTDMFKMNKLLAKHIRPLEAKKDSNR 302
++ + L+ H P E KK+S +
Sbjct: 78 GKQRVELVDLPSLIKLHF-PKEQKKNSQK 105
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 339 TGEKEMPSSEAVKRVWDHIKSNNLEDPANPTMILCDSKLKQ-LFGCESLTAVSVSELLSQ 397
G+ ++ RVW +IK+NNL+DP N +++CD KLK L G + + V + L+
Sbjct: 34 VGQSQISRLGCFMRVWSYIKTNNLQDPKNKNVVICDEKLKSILLGKQRVELVDLPSLIKL 93
Query: 398 HLFKQPNK 405
H K+ K
Sbjct: 94 HFPKEQKK 101
>AT5G14170.1 | chr5:4568696-4570444 REVERSE LENGTH=535
Length = 534
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 329 LSDALASFFGTGEKEMPSSEAVKRVWDHIKSNNLEDPANPTMILCDSKLKQLFGCESLTA 388
LS AL G + P + +W ++K+ L++P +P+ CD+ L+++FG E L
Sbjct: 321 LSTALMDVLGIEVETRP--RIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVFGEEKLKF 378
Query: 389 VSVSELLSQHL 399
VS+ +S HL
Sbjct: 379 TMVSQKISHHL 389
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,433,785
Number of extensions: 244935
Number of successful extensions: 703
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 696
Number of HSP's successfully gapped: 22
Length of query: 406
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 305
Effective length of database: 8,337,553
Effective search space: 2542953665
Effective search space used: 2542953665
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 113 (48.1 bits)