BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0492400 Os08g0492400|J065134F04
         (533 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G03370.1  | chr1:830968-834996 FORWARD LENGTH=1021             418   e-117
AT5G50170.1  | chr5:20421150-20425524 FORWARD LENGTH=1028         349   2e-96

>AT1G03370.1 | chr1:830968-834996 FORWARD LENGTH=1021
          Length = 1020

 Score =  418 bits (1074), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/361 (56%), Positives = 267/361 (73%), Gaps = 2/361 (0%)

Query: 162 STDTPFDELLKYFESKHQEVEMPVDLQG-ILVDKSYITSPSDLNNFLFSPDSNFRQTVVE 220
           S+ T F+ELLK  ESK Q  E P +L G ++VD+ ++ SPSDLN  LF+ DS+F  ++ E
Sbjct: 223 SSSTSFEELLKAMESKDQGSEPPSNLSGGVVVDQLFMISPSDLNIVLFASDSSFYASLTE 282

Query: 221 LQGCSDVKMESWKIDSDGESLKRVITYTTAPSKLVKAVKATEEQSYLKADGNGYSVLLSV 280
           LQG ++V++  WK ++DGES+KRV++Y  A +KL+KAVK TEEQ+YLKADG  Y+VL SV
Sbjct: 283 LQGTTEVQIGPWKAENDGESVKRVVSYLKAATKLIKAVKGTEEQTYLKADGEVYAVLASV 342

Query: 281 STPDVPCGTYFRTEILFRILPGPELDSEQLTSHLVISWRINFLQSTMMKGMIENGAKQGL 340
           +TPDVP G  F+ E+L+ I PGPEL S +  S LV+SWR+NFLQSTMM+GMIENGA+QGL
Sbjct: 343 ATPDVPFGGTFKVEVLYCISPGPELPSGEQCSRLVVSWRLNFLQSTMMRGMIENGARQGL 402

Query: 341 QQNYAQFSDLLSQKIKPIDV-DAGSDKGQVLASLQRGQESDWNIAFLYFCNFGVLCSLFV 399
           + N+ Q+++LL+Q +KP+D  D G +K Q L+SLQ   +SDW +A  YF NF VL +  +
Sbjct: 403 KDNFEQYANLLAQSVKPVDSKDIGLNKEQALSSLQAEPQSDWKLAVQYFANFTVLSTFLI 462

Query: 400 TIYIAVHVQLRSSGAHKGLEFPGLDLPDSLSEIVMGGLLFLQLRHIYKKISCFIQAREQK 459
            IY+ VH+      A +GLEF GLDLPDS+ E V+ G+L LQ   + + IS F+QAR+QK
Sbjct: 463 GIYVFVHIVFAIPSAIQGLEFNGLDLPDSIGEFVVSGVLVLQCERVLQLISRFMQARKQK 522

Query: 460 VGDHGVKAQGDGWLLTVALIEGTKLAPVDATGFSDPYVVFTCNGKSKTSSIKFQTLEPQW 519
             DHG+KA GDGWLLTVALIEG  LA VD +G  DPY+VFT NGK++TSSIKFQ   PQW
Sbjct: 523 GSDHGIKAHGDGWLLTVALIEGVDLAAVDPSGHCDPYIVFTSNGKTRTSSIKFQKSNPQW 582

Query: 520 N 520
           N
Sbjct: 583 N 583



>AT5G50170.1 | chr5:20421150-20425524 FORWARD LENGTH=1028
          Length = 1027

 Score =  349 bits (896), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 183/381 (48%), Positives = 248/381 (65%), Gaps = 5/381 (1%)

Query: 143 QEATTGYEAPATGSQTYSASTDTPFDELLKYFESKHQEVE-MPVDLQG-ILVDKSYITSP 200
           Q   + YE      Q  S++T T F+E L   +S   E E MP +L G +LVD+ Y+ SP
Sbjct: 209 QSVNSNYEDAT--DQCSSSATCTGFEEGLDLMQSSDSEREEMPENLTGGVLVDQKYLVSP 266

Query: 201 SDLNNFLFSPDSNFRQTVVELQGCSDVKMESWKI-DSDGESLKRVITYTTAPSKLVKAVK 259
            +LN FLF+P S FR+ + ELQG SDV+   W +   D   L RV+TY  A +K+VKAVK
Sbjct: 267 CELNKFLFTPSSQFRKELAELQGLSDVQEGPWTMMQEDTPRLTRVVTYMRAATKMVKAVK 326

Query: 260 ATEEQSYLKADGNGYSVLLSVSTPDVPCGTYFRTEILFRILPGPELDSEQLTSHLVISWR 319
           ATE Q Y KA G  ++V +SVSTPDVP G  F+ E+L++ILP  E  +    S L+ISW 
Sbjct: 327 ATENQVYRKASGKQFAVFVSVSTPDVPYGNTFKIELLYKILPETEPTAGGEASRLIISWG 386

Query: 320 INFLQSTMMKGMIENGAKQGLQQNYAQFSDLLSQKIKPIDVDAGSDKGQVLASLQRGQES 379
           I F QST+MKGMIE GA+QGL++++ QFS+LL++  K +D     DK QV+A++Q   ++
Sbjct: 387 IQFSQSTIMKGMIEGGARQGLKESFEQFSNLLAKTYKTLDPAVVLDKEQVIATVQSEPKT 446

Query: 380 DWNIAFLYFCNFGVLCSLFVTIYIAVHVQLRSSGAHKGLEFPGLDLPDSLSEIVMGGLLF 439
           D   AFLYF +  V+C++ +++Y+ VH+        +G EF GLDLPDS  E+   G+L 
Sbjct: 447 DLKSAFLYFWSSSVICAVLLSVYVVVHMLHCEPSKIQGFEFYGLDLPDSFGELFSSGILV 506

Query: 440 LQLRHIYKKISCFIQAREQKVGDHGVKAQGDGWLLTVALIEGTKLAPVDATGFSDPYVVF 499
           L L  +Y     F+QAR  +  D GVKA G GW+LT+ALI+GT LA V+AT   DPYVVF
Sbjct: 507 LLLERVYIMTVHFVQARLHRGRDQGVKANGKGWILTIALIKGTNLASVEATELFDPYVVF 566

Query: 500 TCNGKSKTSSIKFQTLEPQWN 520
           TCNGK++TSS+K Q  +PQWN
Sbjct: 567 TCNGKTRTSSVKLQAQDPQWN 587



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.315    0.131    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,347,287
Number of extensions: 475677
Number of successful extensions: 1233
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1232
Number of HSP's successfully gapped: 2
Length of query: 533
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 430
Effective length of database: 8,282,721
Effective search space: 3561570030
Effective search space used: 3561570030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)