BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0490000 Os08g0490000|AK100183
(508 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G69010.1 | chr1:25941804-25943599 FORWARD LENGTH=312 191 8e-49
AT5G08130.5 | chr5:2606655-2609571 REVERSE LENGTH=533 160 1e-39
AT5G38860.1 | chr5:15559083-15560911 FORWARD LENGTH=299 145 7e-35
AT5G58010.1 | chr5:23483670-23484889 REVERSE LENGTH=298 57 3e-08
AT2G24260.1 | chr2:10319646-10322177 REVERSE LENGTH=351 56 6e-08
AT1G63650.1 | chr1:23599809-23602734 FORWARD LENGTH=597 55 1e-07
AT5G67110.1 | chr5:26785332-26786338 REVERSE LENGTH=211 54 2e-07
AT4G30980.1 | chr4:15079489-15081606 REVERSE LENGTH=311 54 2e-07
AT4G00050.1 | chr4:17863-19848 FORWARD LENGTH=400 54 2e-07
AT4G36930.1 | chr4:17414167-17415945 FORWARD LENGTH=374 53 4e-07
AT1G09530.1 | chr1:3077216-3079367 FORWARD LENGTH=525 52 7e-07
AT2G46510.1 | chr2:19091187-19092887 REVERSE LENGTH=567 52 1e-06
AT4G28790.1 | chr4:14218329-14220173 FORWARD LENGTH=414 51 1e-06
AT4G16430.1 | chr4:9267599-9269002 FORWARD LENGTH=468 50 4e-06
>AT1G69010.1 | chr1:25941804-25943599 FORWARD LENGTH=312
Length = 311
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 112/238 (47%), Positives = 148/238 (62%), Gaps = 15/238 (6%)
Query: 223 RSKHSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVSY 282
RSKHS TEQRRRSKIN+RFQ+LR+L+P+++QKRD ASFLLEVI+Y+++LQEKVQKYE SY
Sbjct: 47 RSKHSVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYEGSY 106
Query: 283 PEWNQENAKVVPWTNIYFRSSWKNAQNKGQVPADHSPDPPELLKNGSPYMFPFTGNSDNN 342
P W+QE K+ PW N ++R Q+ G P + NGS PF G ++N
Sbjct: 107 PGWSQEPTKLTPWRNNHWR-----VQSLGNHPV--------AINNGSGPGIPFPGKFEDN 153
Query: 343 NAVET-AAASGAQDQAETDPMSRVSYRSVDTPSPNNVADKVTSQPHAQLVRPSPAENHTV 401
T A + Q E+D ++ S+++ + QP +V+ A
Sbjct: 154 TVTSTPAIIAEPQIPIESDKARAITGISIESQPELDDKGLPPLQPILPMVQGEQANECPA 213
Query: 402 NCDKLNNS-DLAIDEGTISLSSQYSQELLNKLNHALENSGIDLSQASISVQINLGKRA 458
D L S DL I+ GTIS+SS YS ELL+ L AL+N+GIDLSQA +SVQI+LGKRA
Sbjct: 214 TSDGLGQSNDLVIEGGTISISSAYSHELLSSLTQALQNAGIDLSQAKLSVQIDLGKRA 271
>AT5G08130.5 | chr5:2606655-2609571 REVERSE LENGTH=533
Length = 532
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/249 (45%), Positives = 141/249 (56%), Gaps = 32/249 (12%)
Query: 216 DQMPNTPRSKHSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKV 275
DQ NTPRSKHSATEQRRRSKINDRFQ+LR L+P++DQKRDKASFLLEVIEYI+FLQEK
Sbjct: 275 DQKLNTPRSKHSATEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKA 334
Query: 276 QKYEVSYPEWNQENAKVVPWTNIYFRSSWKNAQNKGQVPADHSPDPP-ELLKNGSPYMFP 334
KY SY WN E AK++ W+N N+ VP + P E KN P
Sbjct: 335 DKYVTSYQGWNHEPAKLLNWSN----------NNQQLVPEGVAFAPKLEEEKNNIPVSVL 384
Query: 335 FTGNSDNNNAVETAAASGAQDQAETDPMSRVSYRSVDTPSPNNVADKVTSQPHAQL---- 390
T + TA S P+S + S +P +A Q HA++
Sbjct: 385 ATAQGVVIDHPTTATTSPF-------PLS-IQSNSFFSPV---IAGNPVPQFHARVASSE 433
Query: 391 -VRPSPAENHTVNCDKLNNSDLAIDEGTISLSSQYSQELLNKLNHALENSGIDLSQASIS 449
V PSP+ + D + EG I +SS YSQ L+ L ALENSG+DL++ASIS
Sbjct: 434 AVEPSPSSR-----SQKEEEDEEVLEGNIRISSVYSQGLVKTLREALENSGVDLTKASIS 488
Query: 450 VQINLGKRA 458
V+I L K++
Sbjct: 489 VEIELAKQS 497
>AT5G38860.1 | chr5:15559083-15560911 FORWARD LENGTH=299
Length = 298
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/258 (40%), Positives = 143/258 (55%), Gaps = 39/258 (15%)
Query: 220 NTPRSKHSATEQRRRSKINDRFQLLRDLLPHN--DQKRDKASFLLEVIEYIRFLQEKVQK 277
N+ RSKHS TEQRRRSKIN+RFQ L D++P N DQKRDKASFLLEVIEYI FLQEKV
Sbjct: 32 NSCRSKHSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHFLQEKVHM 91
Query: 278 YEVSYPEWNQENAKVVPWTNIYFRSSWKNAQNKGQVPADHSPDPPELLKNGSPYMFPFTG 337
YE S+ W Q K++PW N + G V ++ D P+++K+ F+
Sbjct: 92 YEDSHQMWYQSPTKLIPWRNSH-----------GSVAEEN--DHPQIVKS-------FSS 131
Query: 338 NSDNNNAVETAAASG----AQDQAETDPMSRVSYRSVDTPSPNNVADKVTSQPHAQLVRP 393
N + AA+SG + D S VS + + + V+ + ++P Q V+
Sbjct: 132 ND------KVAASSGFLLDTYNSVNPDIDSAVSTKIPEHSPVSAVSSYLRTEPSLQFVQH 185
Query: 394 S----PAENHTVNCDKLNNSDLAIDEGT-ISLSSQYSQELLNKLNHALENSGIDLSQASI 448
T+NC N L DE T SLS+ SQ +LN L AL++SG+++S+ I
Sbjct: 186 DFWQPKTSCGTINC--FTNELLTSDEKTSASLSTVCSQRVLNTLTEALKSSGVNMSETMI 243
Query: 449 SVQINLGKRAMKRSTPAA 466
SVQ++L KR + + AA
Sbjct: 244 SVQLSLRKREDREYSVAA 261
>AT5G58010.1 | chr5:23483670-23484889 REVERSE LENGTH=298
Length = 297
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 226 HSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVS 281
HS E+ RR +I +R + L++L+P N K DKAS L E+IEY+RFLQ +V+ +S
Sbjct: 110 HSIAERLRRERIAERMKSLQELVP-NTNKTDKASMLDEIIEYVRFLQLQVKVLSMS 164
>AT2G24260.1 | chr2:10319646-10322177 REVERSE LENGTH=351
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 226 HSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVS 281
HS E+ RR +I +R + L++L+P N K DKAS L E+I+Y++FLQ +V+ +S
Sbjct: 149 HSIAERLRRERIAERMKALQELVP-NGNKTDKASMLDEIIDYVKFLQLQVKVLSMS 203
>AT1G63650.1 | chr1:23599809-23602734 FORWARD LENGTH=597
Length = 596
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 218 MPNTPR--SKHSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKV 275
+P+TP H+ +E++RR K+N+RF LR ++P + K DK S L + IEY++ LQ++V
Sbjct: 396 LPDTPEETGNHALSEKKRREKLNERFMTLRSIIP-SISKIDKVSILDDTIEYLQDLQKRV 454
Query: 276 QKYE 279
Q+ E
Sbjct: 455 QELE 458
>AT5G67110.1 | chr5:26785332-26786338 REVERSE LENGTH=211
Length = 210
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 226 HSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEV 280
H+ +E++RRSKIN++ + L+ L+P N K DKAS L E IEY++ LQ +VQ V
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIP-NSNKTDKASMLDEAIEYLKQLQLQVQTLAV 151
>AT4G30980.1 | chr4:15079489-15081606 REVERSE LENGTH=311
Length = 310
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 226 HSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVS 281
HS E+ RR +I +R + L++L+P N K DKAS L E+I+Y++FLQ +V+ +S
Sbjct: 141 HSIAERLRRERIAERMKSLQELVP-NGNKTDKASMLDEIIDYVKFLQLQVKVLSMS 195
>AT4G00050.1 | chr4:17863-19848 FORWARD LENGTH=400
Length = 399
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 213 AGTDQMPNTPRSK----HSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYI 268
AG +T RS+ H+ +E++RR KIN R + L+ L+P N K DKAS L EVIEY+
Sbjct: 201 AGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVP-NSSKTDKASMLDEVIEYL 259
Query: 269 RFLQEKV 275
+ LQ +V
Sbjct: 260 KQLQAQV 266
>AT4G36930.1 | chr4:17414167-17415945 FORWARD LENGTH=374
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 226 HSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQ 276
H+ +E+RRRS+IN++ + L+ L+P N K DKAS L E IEY++ LQ +VQ
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIP-NSNKTDKASMLDEAIEYLKQLQLQVQ 251
>AT1G09530.1 | chr1:3077216-3079367 FORWARD LENGTH=525
Length = 524
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 226 HSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQ 276
H+ +E+RRR +IN++ + L++L+P N K DKAS L E IEY++ LQ +VQ
Sbjct: 348 HNLSERRRRDRINEKMRALQELIP-NCNKVDKASMLDEAIEYLKSLQLQVQ 397
>AT2G46510.1 | chr2:19091187-19092887 REVERSE LENGTH=567
Length = 566
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 226 HSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYE 279
H E++RR K+N RF LR ++P N K DKAS L + I YI+ LQEKV+ E
Sbjct: 396 HVEAERQRREKLNQRFYALRSVVP-NISKMDKASLLGDAISYIKELQEKVKIME 448
>AT4G28790.1 | chr4:14218329-14220173 FORWARD LENGTH=414
Length = 413
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 226 HSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVSY 282
H +E+RRR KIN+ + L++LLP K D++S L +VIEY++ LQ ++Q + + +
Sbjct: 282 HKLSERRRRQKINEMMKALQELLPRCT-KTDRSSMLDDVIEYVKSLQSQIQMFSMGH 337
>AT4G16430.1 | chr4:9267599-9269002 FORWARD LENGTH=468
Length = 467
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 226 HSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYE 279
H E++RR K+N RF LR ++P N K DKAS L + I YI +Q+K++ YE
Sbjct: 321 HVEAERQRREKLNQRFYALRAVVP-NISKMDKASLLADAITYITDMQKKIRVYE 373
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.126 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,383,363
Number of extensions: 354065
Number of successful extensions: 1021
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 1073
Number of HSP's successfully gapped: 20
Length of query: 508
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 405
Effective length of database: 8,282,721
Effective search space: 3354502005
Effective search space used: 3354502005
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 114 (48.5 bits)