BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0482700 Os08g0482700|AK060044
(181 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G32300.1 | chr2:13722510-13723464 FORWARD LENGTH=262 84 3e-17
AT1G72230.1 | chr1:27188287-27189093 FORWARD LENGTH=182 83 8e-17
AT2G44790.1 | chr2:18462182-18463232 REVERSE LENGTH=203 75 2e-14
AT1G22480.1 | chr1:7934232-7935054 REVERSE LENGTH=175 75 2e-14
AT3G60270.1 | chr3:22278029-22278762 REVERSE LENGTH=188 72 1e-13
AT2G26720.1 | chr2:11384782-11385402 FORWARD LENGTH=207 65 2e-11
AT2G31050.1 | chr2:13212150-13212752 FORWARD LENGTH=201 65 2e-11
AT3G60280.1 | chr3:22279867-22280633 REVERSE LENGTH=223 65 3e-11
AT5G20230.1 | chr5:6826626-6827408 FORWARD LENGTH=197 60 5e-10
AT5G07475.1 | chr5:2364827-2365536 REVERSE LENGTH=193 60 7e-10
AT3G27200.1 | chr3:10043738-10044340 REVERSE LENGTH=175 58 2e-09
AT3G17675.1 | chr3:6042244-6042781 REVERSE LENGTH=107 56 1e-08
AT5G15350.1 | chr5:4985184-4986154 REVERSE LENGTH=173 55 2e-08
AT2G27035.1 | chr2:11535670-11536251 FORWARD LENGTH=164 51 3e-07
AT3G18590.1 | chr3:6398670-6399337 FORWARD LENGTH=189 50 5e-07
AT4G12880.1 | chr4:7544572-7545226 REVERSE LENGTH=142 50 5e-07
AT5G26330.1 | chr5:9241614-9242635 REVERSE LENGTH=188 46 9e-06
>AT2G32300.1 | chr2:13722510-13723464 FORWARD LENGTH=262
Length = 261
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 33 WTLGQNYDTWASGQTFAVGDKLVFSFVGA-HTVTEVNKNDYDNCXXXXXXXXXXXXXXXX 91
WT+G + TWA+GQTFAVGD LVFS+ A H V EV K ++D+C
Sbjct: 34 WTVGASLRTWAAGQTFAVGDNLVFSYPAAFHDVVEVTKPEFDSC-QAVKPLITFANGNSL 92
Query: 92 LDLAAAGMHYYICTISGHCAGGMKLAINV 120
+ L G Y+IC + GHC+ GMKL +NV
Sbjct: 93 VPLTTPGKRYFICGMPGHCSQGMKLEVNV 121
>AT1G72230.1 | chr1:27188287-27189093 FORWARD LENGTH=182
Length = 181
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 33 WTLGQNYDTWASGQTFAVGDKLVFSFVGAHTVTEVNKNDYDNCXXXXXXXXXXXXXXXXL 92
W+LG++Y + A+G++FAVGD +VF++ HTV EV+++DY +C +
Sbjct: 31 WSLGKDYSSLATGKSFAVGDTIVFNYGAGHTVDEVSESDYKSC-TLGNAISSDSSGTTSI 89
Query: 93 DLAAAGMHYYICTISGHCAGGMKLAINV 120
L G HY+IC I GHC GGMKL++ V
Sbjct: 90 ALKTPGPHYFICGIPGHCTGGMKLSVIV 117
>AT2G44790.1 | chr2:18462182-18463232 REVERSE LENGTH=203
Length = 202
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 33 WTLGQNYDTWASGQTFAVGDKLVFSFVGAHTVTEVNKNDYDNCXXXXXXXXXXXXXXXXL 92
WT G +Y WA+G+TF VGD L F + +HTV V+K YD C +
Sbjct: 36 WTTGVDYSGWATGKTFRVGDILEFKYGSSHTVDVVDKAGYDGC-DASSSTENHSDGDTKI 94
Query: 93 DLAAAGMHYYICTISGHCA--GGMKLAINV 120
DL G++Y+IC+ GHC GGMKLA+NV
Sbjct: 95 DLKTVGINYFICSTPGHCRTNGGMKLAVNV 124
>AT1G22480.1 | chr1:7934232-7935054 REVERSE LENGTH=175
Length = 174
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 33 WTLGQNYDTWASGQTFAVGDKLVFSFVGAHTVTEVNKNDYDNCXXXXXXXXXXXXXXXXL 92
W+LG +Y +G+TF+VGD +VF++ HTV EV++NDY +C
Sbjct: 27 WSLGTDYTPLTTGKTFSVGDTIVFNYGAGHTVDEVSENDYKSCTLGNSITSDSSGTTTI- 85
Query: 93 DLAAAGMHYYICTISGHCAGGMKLAINV 120
L G Y+IC I GHCA GMKLA+ V
Sbjct: 86 ALTTTGPRYFICGIPGHCAAGMKLAVTV 113
>AT3G60270.1 | chr3:22278029-22278762 REVERSE LENGTH=188
Length = 187
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 33 WTLGQNYDTWASGQTFAVGDKLVFSFVGAHTVTEVNKNDYDNCXXXXXXXXXXXXXXXXL 92
WT+G Y +W S +TF VGD L F + +H+V VNK DYD C +
Sbjct: 34 WTIGVEYTSWVSEKTFRVGDTLEFKYGPSHSVAVVNKADYDGC-ETSRPTQSFSDGDTKI 92
Query: 93 DLAAAGMHYYICTISGHCAGGMKLAINV 120
DL G +++C GHC+ GMKLA+ V
Sbjct: 93 DLTKVGAIHFLCLTPGHCSLGMKLAVQV 120
>AT2G26720.1 | chr2:11384782-11385402 FORWARD LENGTH=207
Length = 206
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 33 WTL-GQNYDTWASGQTFAVGDKLVFSF-VGAHTVTEVNKNDYDNCXXXXXXXXXXXXXXX 90
WT+ G +Y+ WAS + F VGD LVF++ H VTEV ND++ C
Sbjct: 37 WTMIGGDYEAWASSRVFQVGDTLVFAYNKDYHDVTEVTHNDFEMC-ESSKPLRRYKTGSD 95
Query: 91 XLDLAAAGMHYYICTISGHCAGGMKLAINV 120
+ L G+ ++IC + GHC G KL I+V
Sbjct: 96 SISLTKPGLQHFICGVPGHCKKGQKLQIHV 125
>AT2G31050.1 | chr2:13212150-13212752 FORWARD LENGTH=201
Length = 200
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 33 WT-LGQNYDTWASGQTFAVGDKLVFSF-VGAHTVTEVNKNDYDNCXXXXXXXXXXXXXXX 90
WT + NY+TWAS TF VGD LVF + H VTEV NDY+ C
Sbjct: 37 WTIMSVNYETWASTITFQVGDSLVFKYNKDFHDVTEVTHNDYEMCEPSKPLARYETGSDI 96
Query: 91 XLDLAAAGMHYYICTISGHCAGGMKLAINV 120
+ L G+ ++IC GHC G KL I+V
Sbjct: 97 VI-LTKPGLQHFICGFPGHCDMGQKLQIHV 125
>AT3G60280.1 | chr3:22279867-22280633 REVERSE LENGTH=223
Length = 222
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 33 WTLGQNYDTWASGQTFAVGDKLVFSFVGAHTVTEVNKNDYDNCXXXXXXXXXXXXXXXXL 92
WT +Y W +G+TF VGD L F + +H+V+ V+K YDNC +
Sbjct: 32 WTSNLDYTVWLTGKTFRVGDTLEFVYGLSHSVSVVDKAGYDNC-DSSGATQNFADGDTKI 90
Query: 93 DLAAAGMHYYICTISGHCAGGMKLAINV 120
DL G +++C GHC GMKLA+ V
Sbjct: 91 DLTTVGTMHFLCPTFGHCKNGMKLAVPV 118
>AT5G20230.1 | chr5:6826626-6827408 FORWARD LENGTH=197
Length = 196
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 33 WTLGQN---YDTWASGQTFAVGDKLVFSF-VGAHTVTEVNKNDYDNCXXXXXXXXXXXXX 88
WT + Y TWA+G+TF VGD+L F F G H V V++ ++NC
Sbjct: 33 WTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKPISHMTVPP 92
Query: 89 XXXLDLAAAGMHYYICTISGHCAGGMKLAINV 120
+ L G Y+ICT+ HC G KL+I V
Sbjct: 93 VKIM-LNTTGPQYFICTVGDHCRFGQKLSITV 123
>AT5G07475.1 | chr5:2364827-2365536 REVERSE LENGTH=193
Length = 192
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 33 WTLGQNYDTWASGQTFAVGDKLVFSFVGAHTVTEVNKNDYDNCXXXXXXXXXXXXXXXXL 92
W + + ++W SG+ F+ GD L+F + H+V EV K++Y NC +
Sbjct: 38 WDISSDLESWTSGKRFSPGDVLMFQYSSTHSVYEVAKDNYQNC-NTTDAIRTFTNGNTTV 96
Query: 93 DLAAAGMHYYICTISGHCAGGMKLAINV 120
L+ G +++C HC GM+L +NV
Sbjct: 97 ALSKPGNRFFVCGNRLHCFAGMRLLVNV 124
>AT3G27200.1 | chr3:10043738-10044340 REVERSE LENGTH=175
Length = 174
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 33 WTLGQNYDTWASGQTFAVGDKLVFSFVGAHTVTEV-NKNDYDNCXXXXXXXXXXXXXXXX 91
W ++D+W+S Q+F VGD++VF + H+V E+ ++ Y +C
Sbjct: 34 WEQSVDFDSWSSDQSFKVGDQIVFKYSELHSVVELGSETAYKSC-DLGTSVNSLSSGNDV 92
Query: 92 LDLAAAGMHYYICTISGHCAGGMKLAINV 120
+ L+ G Y+ C GHC GMK+ +NV
Sbjct: 93 VKLSKTGTRYFACGTVGHCEQGMKIKVNV 121
>AT3G17675.1 | chr3:6042244-6042781 REVERSE LENGTH=107
Length = 106
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 33 WTLGQNYDTWASGQTFAVGDKLVFSFVG-AHTVTEVNKNDYDNCXXXXXXXXXXXXXXXX 91
W L NY W G+ F VGD LVF++ H V +VN Y +C
Sbjct: 17 WELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDCGLDNYTTLFTKGNDSI 76
Query: 92 LDLAAAGMHYYICTISGHCAGGMKLAINV 120
+ L+ G ++IC + HC G KL+INV
Sbjct: 77 I-LSEVGKLWFICGVDDHCVNGQKLSINV 104
>AT5G15350.1 | chr5:4985184-4986154 REVERSE LENGTH=173
Length = 172
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 33 WTLGQNYDTWASGQTFAVGDKLVFSF-VGAHTVTEVNKNDYDNCXXXXXXXXXXXXXXXX 91
W NY WA G+ F +GD L F F H + EVNK DY+ C
Sbjct: 37 WNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRD 96
Query: 92 LDLAAAGMHYYICTISGHCAGGMKLAINV 120
+ HYY+ G C GGMKL++ V
Sbjct: 97 IVTLNQTKHYYLLDGKGGCYGGMKLSVKV 125
>AT2G27035.1 | chr2:11535670-11536251 FORWARD LENGTH=164
Length = 163
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 33 WTLGQNYDTWASGQTFAVGDKLVFSF-VGAHTVTEVNKNDYDNCXXXXXXXXXXXXXXXX 91
W N+ WA+ Q F GD L F F H + +VNK+ Y+ C
Sbjct: 37 WNSDVNFSDWANHQRFYSGDWLYFGFNRTRHNILQVNKSSYEQCVDNDYIFNITRGGRDV 96
Query: 92 LDLAAAGMHYYICTISGHCAGGMKLAINV 120
L +Y+IC G+C GMKLAI V
Sbjct: 97 FQLLEPKPYYFICG-RGYCLKGMKLAITV 124
>AT3G18590.1 | chr3:6398670-6399337 FORWARD LENGTH=189
Length = 188
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 34 TLGQNYDTWASGQTFAVGDKLVFSFVGAHTVTEVNKNDYDNCXXXXXXXXXXXXXXXXLD 93
TLG ++ WAS F VGD L F + +V V++ +Y C
Sbjct: 42 TLGDAFNQWASDNRFKVGDTLRFKYT-KDSVLVVSEEEYKKCKATKPQLYSNNEDTV-FK 99
Query: 94 LAAAGMHYYICTISGHCAGGMKLAINV 120
L G+ Y+I +SGHC G K+ + V
Sbjct: 100 LDRPGLFYFISGVSGHCEKGQKMIVKV 126
>AT4G12880.1 | chr4:7544572-7545226 REVERSE LENGTH=142
Length = 141
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Query: 33 WTLGQNYDTWASGQTFAVGDKLVFSFVG-AHTVTEVNKNDYDNCXXXXXXXXXXXXXXXX 91
W NY WA G+ F VGD L F F H + EVNK DY+ C
Sbjct: 37 WNPNINYTLWAQGKHFYVGDWLYFVFYRDQHNILEVNKADYEKCISNRPIRNYTRGAGRD 96
Query: 92 LDLAAAGMHYYICTISGHCAGGMKLAINV 120
+ YY+ G C GMKL + V
Sbjct: 97 IVPLYETRRYYLLDGRGGCVQGMKLDVLV 125
>AT5G26330.1 | chr5:9241614-9242635 REVERSE LENGTH=188
Length = 187
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 33 WTLGQN--YDTWASGQTFAVGDKLVFSFVGA-HTVTEVNKNDYDNCXXXXXXXXXXXXXX 89
WT N Y WAS +TF +GD ++F + H V V Y +C
Sbjct: 32 WTTIANVDYKLWASTKTFHIGDTVLFEYNPQFHNVMRVTHPMYRSCNTSKPISTFTTGND 91
Query: 90 XXLDLAAAGMHYYICTISGHCAGGMKLAINV 120
+ L G H++ C + GHC G KL ++V
Sbjct: 92 S-ITLTNHGHHFFFCGVPGHCLAGQKLDLHV 121
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,549,905
Number of extensions: 38605
Number of successful extensions: 159
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 150
Number of HSP's successfully gapped: 18
Length of query: 181
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 89
Effective length of database: 8,584,297
Effective search space: 764002433
Effective search space used: 764002433
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 108 (46.2 bits)