BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0480100 Os08g0480100|AK101591
(624 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G30600.1 | chr4:14938142-14940600 REVERSE LENGTH=635 744 0.0
AT1G15310.1 | chr1:5269173-5271947 REVERSE LENGTH=480 132 5e-31
AT5G03940.1 | chr5:1060265-1063257 REVERSE LENGTH=565 130 2e-30
AT1G48900.1 | chr1:18084972-18087743 REVERSE LENGTH=496 129 3e-30
AT5G49500.1 | chr5:20077556-20080206 REVERSE LENGTH=498 106 4e-23
AT2G45770.2 | chr2:18851248-18853402 FORWARD LENGTH=374 102 8e-22
>AT4G30600.1 | chr4:14938142-14940600 REVERSE LENGTH=635
Length = 634
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/652 (64%), Positives = 473/652 (72%), Gaps = 46/652 (7%)
Query: 1 MLEELLIFTRGGLILWSSCRALGGAALKGSPIDALIRSCLLEERSADASFSQDT----YA 56
MLE+LLIFTRGGLILW+ C+ +G A LKGSPID LIRSCLLEERS SF+ D Y
Sbjct: 1 MLEQLLIFTRGGLILWT-CKEIGNA-LKGSPIDTLIRSCLLEERSGAVSFNYDAPGAAYT 58
Query: 57 LKWTFNNDLGLVFVAVYQRMLHLLYVDDLLAAVRKEFSQIYDPKRTSYDDAFNEVFRQLH 116
LKWTF+NDLGLVFVAVYQR+LHLLYVDDLL+ V++ FS++YDPKR +YDD F+E FRQL
Sbjct: 59 LKWTFHNDLGLVFVAVYQRILHLLYVDDLLSMVKQSFSEVYDPKRMAYDD-FDETFRQLR 117
Query: 117 LEAEARSEEMKKNKQVTGSRPTKVTTKTNRGDTQXXXXXXXXXXXXXXXXXXXXXXE--- 173
+EAEAR+EE++K KQV +P VT+ +G +
Sbjct: 118 IEAEARAEELRKTKQV--GKP--VTSVKKQGQVSKPGLEGGNKRVSSEGGSKKDDGDGGN 173
Query: 174 ----HTLPNGNSKMQENSLKDNSHARSVVVKGKENGDPNDGAFDVNKLQKMRNKG----- 224
TL NG+S + ++D+S + + GKEN N A D++KLQK+R+KG
Sbjct: 174 KAKVSTLTNGHSN-GNHQMEDDSQETNDLANGKENTSSN-VAVDLSKLQKLRSKGVRGRG 231
Query: 225 ---------NKKNEVASXXXXXXXXXXXXXXXXXXRVWDDTPDDKKKLDFTDPADERG-D 274
NK ++VA RVWDD + KLDFTD DE G +
Sbjct: 232 GVRKTDSIGNKSSKVAEPAKKATKKN---------RVWDDAAPKQSKLDFTDSIDENGNN 282
Query: 275 EVIDQVVVKQGXXXXXXXX--XXXXXXXXXXXXXXXXXXXXQKKKGWFSSMFKSIAGNNV 332
+ +D V QG KKKGWFSS+F+SI G
Sbjct: 283 DHVDIVAADQGESMMDKEEVFSSDSESEDDDEPGSDEKPAQAKKKGWFSSVFQSITGKAN 342
Query: 333 LEKSDIQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEEA 392
LE++D+ PALKALK+RLMTKNVAEEIAEKLCESV ASLEGKKL SFTRISSTVQ AME+A
Sbjct: 343 LERTDLGPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLSSFTRISSTVQAAMEDA 402
Query: 393 LLRILTPRRSIDILRDVHAAKERGKPYVIVFVGVNGVGKSTNLAKVAYWLLQHNLSVSLA 452
L+RILTPRRSIDILRDVHAAKE+ KPYV+VFVGVNGVGKSTNLAKVAYWL QH +SV +A
Sbjct: 403 LVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMA 462
Query: 453 ACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRM 512
ACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRN SDVVLVDTAGRM
Sbjct: 463 ACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRM 522
Query: 513 QDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAVDQLTKFNQKLADLSAVPTTRLIDGI 572
QDNEPLMRALSKLINLN PDLVLFVGEALVGNDAVDQL+KFNQKL+DLS RLIDGI
Sbjct: 523 QDNEPLMRALSKLINLNQPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSTSGNPRLIDGI 582
Query: 573 LLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 624
LLTKFDTIDDKVGAALSMVYISG+PVMFVGCGQSYTDLKKLNVK+IVKTLLK
Sbjct: 583 LLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKAIVKTLLK 634
>AT1G15310.1 | chr1:5269173-5271947 REVERSE LENGTH=480
Length = 479
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 126/239 (52%), Gaps = 18/239 (7%)
Query: 385 VQTAMEEALLRILTPRRSIDILRDVHAAKERGKPYVIVFVGVNGVGKSTNLAKVAYWLLQ 444
++ A+ + L R+L P + A ++ KP V++FVG+ G GK+T K AY+ +
Sbjct: 75 IEQAIFKELCRMLDPGKP-------AFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQK 127
Query: 445 HNLSVSLAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVV 504
+L DTFR+GA +QL+ +A + +IP + E DP +A E + + K D++
Sbjct: 128 KGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLI 187
Query: 505 LVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAVDQLTKFNQKLADLSAVP 564
+VDT+GR + L + ++ PDLV+FV ++ +G A +Q F + ++
Sbjct: 188 IVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVS------ 241
Query: 565 TTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 623
+ +++TK D K G ALS V + +PV+F+G G+ + + +VK V LL
Sbjct: 242 ----VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
>AT5G03940.1 | chr5:1060265-1063257 REVERSE LENGTH=565
Length = 564
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 153/294 (52%), Gaps = 18/294 (6%)
Query: 318 GWFSSMFKSIAGNNVLEKSDIQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGS 377
G + + + G VL K +I ++ ++ L+ +V+ + + +SV+ G +
Sbjct: 83 GGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQAVGMGVIR 142
Query: 378 FTRISSTVQTAMEEALLRILTPRRSIDILRDVHAAKERGKPYVIVFVGVNGVGKSTNLAK 437
+ + + + L++++ S ++ AK P VI+ G+ GVGK+T AK
Sbjct: 143 GVKPDQQLVKIVHDELVKLMGGEVS-----ELQFAKS--GPTVILLAGLQGVGKTTVCAK 195
Query: 438 VAYWLLQHNLSVSLAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 497
+A +L + S L A D +R A++QL ++ +P++ G + PA +AK+ ++EA
Sbjct: 196 LACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAK 255
Query: 498 RNKSDVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAVDQLTKFNQKL 557
+N DVV++DTAGR+Q ++ +M L + +P VL V +A+ G +A +T FN ++
Sbjct: 256 KNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEI 315
Query: 558 ADLSAVPTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLK 611
I G +LTK D D + GAALS+ +SG P+ VG G+ DL+
Sbjct: 316 G----------ITGAILTKLDG-DSRGGAALSVKEVSGKPIKLVGRGERMEDLE 358
>AT1G48900.1 | chr1:18084972-18087743 REVERSE LENGTH=496
Length = 495
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 18/239 (7%)
Query: 385 VQTAMEEALLRILTPRRSIDILRDVHAAKERGKPYVIVFVGVNGVGKSTNLAKVAYWLLQ 444
++ A+ L ++L P + A ++ K V++FVG+ G GK+T K AY+ +
Sbjct: 75 IEQAIFSELCKMLDPGKPA-------FAPKKAKASVVMFVGLQGAGKTTTCTKYAYYHQK 127
Query: 445 HNLSVSLAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVV 504
+L DTFR+GA +QL+ +A + +IP + E DP +A E + + D++
Sbjct: 128 KGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFKKENCDLI 187
Query: 505 LVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAVDQLTKFNQKLADLSAVP 564
+VDT+GR + L + ++ PDLV+FV ++ +G A DQ F Q +A
Sbjct: 188 IVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVA------ 241
Query: 565 TTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 623
+ +++TK D K G ALS V + +PV+F+G G+ + + +VK V LL
Sbjct: 242 ----VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
>AT5G49500.1 | chr5:20077556-20080206 REVERSE LENGTH=498
Length = 497
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 20/241 (8%)
Query: 385 VQTAMEEALLRILTPRRSIDILRDVHAAKERGKPYVIVFVGVNG--VGKSTNLAKVAYWL 442
++ A+ L ++L P +S A ++ KP V++FVG+ G + K + + +
Sbjct: 75 IEQAIFSELCKMLDPGKS-------AFAPKKAKPSVVMFVGLQGEVLEKPQLVPSMLIII 127
Query: 443 LQHNLSVSLAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSD 502
+ +L DTFR+GA +QL+ +A + +IP + DP +A E + + D
Sbjct: 128 RRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDRFKKENCD 187
Query: 503 VVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAVDQLTKFNQKLADLSA 562
+++VDT+GR + L + ++ PDLV+FV ++ +G A +Q F Q +A
Sbjct: 188 LIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQTVA---- 243
Query: 563 VPTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTL 622
+ +++TK D K G LS V + +PV+F+G G+ + + + K V L
Sbjct: 244 ------VGAVIITKMDG-HAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRL 296
Query: 623 L 623
L
Sbjct: 297 L 297
>AT2G45770.2 | chr2:18851248-18853402 FORWARD LENGTH=374
Length = 373
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 36/297 (12%)
Query: 342 LKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRR 401
L L++ L+ + +I ++ E + + KL S S ++ A++E++L +L +
Sbjct: 97 LDELEEALLVSDFGPKITVRIVERLREDIMSGKLKS----GSEIKDALKESVLEMLAKKN 152
Query: 402 SIDILRDVHAAKERGKPYVIVFVGVNGVGKSTNL-------AKVAYWLLQHNLSVSLAAC 454
S L+ KP VI+ VGVNG GK+T+L K+A+ L V +AA
Sbjct: 153 SKTELQLGFR-----KPAVIMIVGVNGGGKTTSLDSGFCFSGKLAHRLKNEGTKVLMAAG 207
Query: 455 DTFRSGAVEQLRTHARRLQIPIF-EKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQ 513
DTFR+ A +QL A R I +G + A V +A++ DVVL DT+GR+
Sbjct: 208 DTFRAAASDQLEIWAERTGCEIVVAEGDKAKAATVLSKAVKRGKEEGYDVVLCDTSGRLH 267
Query: 514 DNEPLM-------RALSKLINLNSPDLVLFVGEALVGNDAVDQLTKFNQKLADLSAVPTT 566
N LM +A+ K+++ +P+ +L V + G + + Q +FN+ +
Sbjct: 268 TNYSLMEELIACKKAVGKIVS-GAPNEILLVLDGNTGLNMLPQAREFNEVVG-------- 318
Query: 567 RLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 623
I G++LTK D + G +S+V G PV F+G G++ DL+ + ++ V +
Sbjct: 319 --ITGLILTKLDG-SARGGCVVSVVEELGIPVKFIGVGEAVEDLQPFDPEAFVNAIF 372
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,570,473
Number of extensions: 432394
Number of successful extensions: 1357
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1345
Number of HSP's successfully gapped: 7
Length of query: 624
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 519
Effective length of database: 8,227,889
Effective search space: 4270274391
Effective search space used: 4270274391
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 115 (48.9 bits)