BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0477900 Os08g0477900|011-005-C05
(223 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G00870.1 | chr4:362230-363639 REVERSE LENGTH=424 68 4e-12
AT2G40200.1 | chr2:16791098-16792027 FORWARD LENGTH=255 63 1e-10
AT4G38070.1 | chr4:17876535-17882569 FORWARD LENGTH=1514 61 4e-10
AT5G46760.1 | chr5:18974231-18976009 FORWARD LENGTH=593 60 1e-09
AT1G68810.1 | chr1:25861289-25862882 FORWARD LENGTH=369 59 2e-09
AT4G17880.1 | chr4:9933702-9935471 REVERSE LENGTH=590 59 2e-09
AT1G32640.1 | chr1:11799042-11800913 REVERSE LENGTH=624 59 2e-09
AT2G46510.1 | chr2:19091187-19092887 REVERSE LENGTH=567 59 3e-09
AT3G56770.1 | chr3:21029202-21030618 REVERSE LENGTH=231 58 3e-09
AT3G25710.1 | chr3:9369598-9371096 FORWARD LENGTH=345 58 4e-09
AT1G01260.1 | chr1:109595-111367 FORWARD LENGTH=591 58 5e-09
AT4G00050.1 | chr4:17863-19848 FORWARD LENGTH=400 56 1e-08
AT4G09820.1 | chr4:6182067-6186261 FORWARD LENGTH=519 54 9e-08
AT5G46830.1 | chr5:19002719-19004254 FORWARD LENGTH=512 54 9e-08
AT3G26744.1 | chr3:9832953-9834790 REVERSE LENGTH=495 52 2e-07
AT1G12860.1 | chr1:4384758-4386392 FORWARD LENGTH=451 52 3e-07
AT4G16430.1 | chr4:9267599-9269002 FORWARD LENGTH=468 51 4e-07
AT1G63650.1 | chr1:23599809-23602734 FORWARD LENGTH=597 51 6e-07
AT2G16910.1 | chr2:7331721-7334077 FORWARD LENGTH=572 51 6e-07
AT5G58010.1 | chr5:23483670-23484889 REVERSE LENGTH=298 49 2e-06
AT5G61270.1 | chr5:24638873-24640439 REVERSE LENGTH=367 48 3e-06
AT4G37850.1 | chr4:17796362-17797647 REVERSE LENGTH=329 48 4e-06
AT2G22770.1 | chr2:9684858-9686321 FORWARD LENGTH=321 48 4e-06
AT1G09530.1 | chr1:3077216-3079367 FORWARD LENGTH=525 48 4e-06
AT5G41315.1 | chr5:16529457-16532866 FORWARD LENGTH=638 48 5e-06
AT2G22750.2 | chr2:9672145-9673624 FORWARD LENGTH=306 48 5e-06
AT2G41130.1 | chr2:17143360-17144686 FORWARD LENGTH=254 47 6e-06
>AT4G00870.1 | chr4:362230-363639 REVERSE LENGTH=424
Length = 423
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 9 AAAVRKGGSPAVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELR 68
AAA ++ PAV SH EAE++RR+++N LR +VP SRMDKA+LL + V ++ L+
Sbjct: 236 AAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLK 295
Query: 69 CRADD 73
+ DD
Sbjct: 296 SKIDD 300
>AT2G40200.1 | chr2:16791098-16792027 FORWARD LENGTH=255
Length = 254
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 21 RSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRA 71
RSH AE++RR RIN+HL LR LVP++ ++DKAALL V+ V+EL+ +A
Sbjct: 65 RSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKA 115
>AT4G38070.1 | chr4:17876535-17882569 FORWARD LENGTH=1514
Length = 1513
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 19 AVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRADD 73
A + HS+AER+RR RIN+ ATLRT++P+ + DKA++LGE VR+ EL+ D
Sbjct: 1349 AAKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQD 1403
>AT5G46760.1 | chr5:18974231-18976009 FORWARD LENGTH=593
Length = 592
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 39/53 (73%)
Query: 22 SHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRADDA 74
+H EAER+RR+++N +LR +VP+ S+MDKA+LLG+ + ++ EL+ + A
Sbjct: 415 NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQA 467
>AT1G68810.1 | chr1:25861289-25862882 FORWARD LENGTH=369
Length = 368
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 44/50 (88%)
Query: 19 AVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELR 68
A +SHSEAER+RR+RIN HLA LR+++P+ ++ DKA+LL EV++HV+EL+
Sbjct: 174 ASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELK 223
>AT4G17880.1 | chr4:9933702-9935471 REVERSE LENGTH=590
Length = 589
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 38/49 (77%)
Query: 22 SHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCR 70
+H EAER+RR+++N +LR +VP+ S+MDKA+LLG+ + ++ EL+ +
Sbjct: 416 NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSK 464
>AT1G32640.1 | chr1:11799042-11800913 REVERSE LENGTH=624
Length = 623
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 37/49 (75%)
Query: 22 SHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCR 70
+H EAER+RR+++N LR +VP+ S+MDKA+LLG+ + ++ EL+ +
Sbjct: 452 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSK 500
>AT2G46510.1 | chr2:19091187-19092887 REVERSE LENGTH=567
Length = 566
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 38/47 (80%)
Query: 22 SHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELR 68
+H EAER+RR+++N LR++VP+ S+MDKA+LLG+ + +++EL+
Sbjct: 395 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQ 441
>AT3G56770.1 | chr3:21029202-21030618 REVERSE LENGTH=231
Length = 230
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 42/58 (72%)
Query: 19 AVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRADDATE 76
++R+H EAERKRR RIN+HL LR L+ S+ DK+ LL +VV+ V+EL+ + + T+
Sbjct: 45 SLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTLEITD 102
>AT3G25710.1 | chr3:9369598-9371096 FORWARD LENGTH=345
Length = 344
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 5 GECSAAAVRKGGS-PAVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRH 63
G+ SA V + A +SHSEAER+RR+RIN HLA LR+++P+ ++ DKA+LL EV++H
Sbjct: 117 GKLSAQEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQH 176
Query: 64 VRELR 68
++EL+
Sbjct: 177 MKELK 181
>AT1G01260.1 | chr1:109595-111367 FORWARD LENGTH=591
Length = 590
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 22 SHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCR 70
+H EAER+RR+++N LR++VP+ S+MDKA+LLG+ V ++ EL +
Sbjct: 433 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAK 481
>AT4G00050.1 | chr4:17863-19848 FORWARD LENGTH=400
Length = 399
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 39/48 (81%)
Query: 23 HSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCR 70
H+++ERKRR +IN + TL+ LVP++S+ DKA++L EV+ ++++L+ +
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQ 265
>AT4G09820.1 | chr4:6182067-6186261 FORWARD LENGTH=519
Length = 518
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 22 SHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRADD 73
SH AER+RR+++N TLR++VP ++MDK ++LG+ + +V LR R +
Sbjct: 363 SHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHE 414
>AT5G46830.1 | chr5:19002719-19004254 FORWARD LENGTH=512
Length = 511
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 22 SHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRADDA 74
+H EAER RR+++N LR +VP+ S+MDK +LL + V ++ EL+ +A++
Sbjct: 343 NHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENV 395
>AT3G26744.1 | chr3:9832953-9834790 REVERSE LENGTH=495
Length = 494
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 37/48 (77%)
Query: 26 AERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRADD 73
AER+RR+++N L LR++VP S+MD+A++LG+ + +++EL R +D
Sbjct: 311 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 358
>AT1G12860.1 | chr1:4384758-4386392 FORWARD LENGTH=451
Length = 450
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 37/48 (77%)
Query: 26 AERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRADD 73
AER+RR+++N L LR++VP S+MD+A++LG+ + +++EL R +D
Sbjct: 271 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 318
>AT4G16430.1 | chr4:9267599-9269002 FORWARD LENGTH=468
Length = 467
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 35/47 (74%)
Query: 22 SHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELR 68
+H EAER+RR+++N LR +VP+ S+MDKA+LL + + ++ +++
Sbjct: 320 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQ 366
>AT1G63650.1 | chr1:23599809-23602734 FORWARD LENGTH=597
Length = 596
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 39/52 (75%)
Query: 22 SHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRADD 73
+H+ +E+KRR+++N TLR+++PS S++DK ++L + + ++++L+ R +
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQE 456
>AT2G16910.1 | chr2:7331721-7334077 FORWARD LENGTH=572
Length = 571
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 36/46 (78%)
Query: 26 AERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRA 71
AER+RR+++N L LR+LVP +++D+A++LG+ + +V+EL+ A
Sbjct: 318 AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEA 363
>AT5G58010.1 | chr5:23483670-23484889 REVERSE LENGTH=298
Length = 297
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 19 AVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCR 70
A HS AER RR+RI + +L+ LVP+ ++ DKA++L E++ +VR L+ +
Sbjct: 106 ATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQ 157
>AT5G61270.1 | chr5:24638873-24640439 REVERSE LENGTH=367
Length = 366
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 3 TDGECSAAAVRKGGSPAVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVR 62
T GE + R+G + A+ H+E+ER+RR RIN + TL+ L+P+AS+ DK ++L +V+
Sbjct: 153 TRGEAGRSNGRRGRAAAI--HNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIE 210
Query: 63 HVRELRCR 70
H+++L+ +
Sbjct: 211 HLKQLQAQ 218
>AT4G37850.1 | chr4:17796362-17797647 REVERSE LENGTH=329
Length = 328
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 21 RSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRADDATE 76
+ H AERKRR+++ L LVP +MDKA++LG+ ++H++ L+ R + E
Sbjct: 151 QDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEE 206
>AT2G22770.1 | chr2:9684858-9686321 FORWARD LENGTH=321
Length = 320
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 20 VRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRA 71
++ H AERKRRQ++N L L L+P + DKA +L + ++H+++L+ R
Sbjct: 130 LKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERV 181
>AT1G09530.1 | chr1:3077216-3079367 FORWARD LENGTH=525
Length = 524
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 4 DGECSAAAVRKG-GSPAVRS---HSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGE 59
DG A R G GS RS H+ +ER+RR RIN + L+ L+P+ +++DKA++L E
Sbjct: 325 DGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDE 384
Query: 60 VVRHVRELRCR 70
+ +++ L+ +
Sbjct: 385 AIEYLKSLQLQ 395
>AT5G41315.1 | chr5:16529457-16532866 FORWARD LENGTH=638
Length = 637
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 17 SPAVR----SHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRAD 72
SP R +H+ E+KRR+++N TLR ++PS +++DK ++L + + +++EL R
Sbjct: 432 SPEARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQ 491
Query: 73 D 73
+
Sbjct: 492 E 492
>AT2G22750.2 | chr2:9672145-9673624 FORWARD LENGTH=306
Length = 305
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 MVTDGECSAAAVRKGGSPAVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEV 60
++ G A ++ + S A + H AERKRR+++ L L+P +MDKA++LG+
Sbjct: 106 LIIRGTKRAQSLTRSQSNA-QDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDA 164
Query: 61 VRHVRELR 68
++H++ L+
Sbjct: 165 IKHIKYLQ 172
>AT2G41130.1 | chr2:17143360-17144686 FORWARD LENGTH=254
Length = 253
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 39/50 (78%)
Query: 19 AVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELR 68
A+R+H EAER+RR+RIN+HL LR ++ S+ DKA LL +VV+ VREL+
Sbjct: 67 ALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELK 116
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.131 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,265,686
Number of extensions: 47363
Number of successful extensions: 246
Number of sequences better than 1.0e-05: 31
Number of HSP's gapped: 264
Number of HSP's successfully gapped: 31
Length of query: 223
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 128
Effective length of database: 8,502,049
Effective search space: 1088262272
Effective search space used: 1088262272
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 110 (47.0 bits)