BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0471900 Os08g0471900|AK069434
         (501 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22480.1  | chr5:7451643-7456168 REVERSE LENGTH=494            660   0.0  
AT5G37340.2  | chr5:14787488-14792373 REVERSE LENGTH=499          644   0.0  

>AT5G22480.1 | chr5:7451643-7456168 REVERSE LENGTH=494
          Length = 493

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/466 (67%), Positives = 375/466 (80%), Gaps = 5/466 (1%)

Query: 34  PLHEIESLCMRCGDNGTTRLLMTMIPHFREVVLMAFECPHCGERNNEVQFAGQLQPKGCC 93
           PL+ +ES+CMRC +NGTTR L+T+IPHFR+V++ AFECPHCGERNNEVQFAG++QP+GCC
Sbjct: 27  PLYVVESMCMRCQENGTTRFLLTLIPHFRKVLISAFECPHCGERNNEVQFAGEIQPRGCC 86

Query: 94  YRLEVPRGQNEILNRQVVKSDSATIKIPELDFEIPPEAQRGSLSTVEGIIMRAVDELQAL 153
           Y LEV  G  +I +RQVVKS+SATIKIPELDFEIPPEAQRGSLSTVEGI+ RA DEL AL
Sbjct: 87  YNLEVLAGDVKIFDRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILARAADELSAL 146

Query: 154 QDERKKVDPQKAEAIDKFLAKLRSLGLGEAAFTFVLDDPAGNSFIENQNAPSSDPLLSVR 213
           Q+ERKKVDP+ AEAID+FL+KLR+    E +FTF+LDDPAGNSFIEN +APS DP L+++
Sbjct: 147 QEERKKVDPKTAEAIDQFLSKLRACAKAETSFTFILDDPAGNSFIENPHAPSPDPSLTIK 206

Query: 214 FYERMREQQAALGFLVEPSTEEPGDQPVNHASTVEGNSEVLQEPHGSVGAVAGRRAIAQG 273
           FYER  EQQA LG++  PS     +  +   ST     +    P+G++GA AG RAIAQ 
Sbjct: 207 FYERTPEQQATLGYVANPSQAGQSEGSLGAPST-----KTAYVPNGTIGATAGHRAIAQS 261

Query: 274 NPDEVAAALCRYSAPEEVDTLPSTCGACGTECVTRFFATKIPYFREVIVMATTCDMCGYR 333
           N  +++  L RYSAPEEV T PSTCGAC   C TR F TKIPYF+EVIVMA+TCD CGYR
Sbjct: 262 NSTDISDNLFRYSAPEEVMTFPSTCGACTEPCETRMFVTKIPYFQEVIVMASTCDSCGYR 321

Query: 334 NSELKPGGEIPAKGKKITLRVQNGKDLTRDVIKSDSAGVKVPELELELASGTLGGIVTTV 393
           NSELKPGG IP KGKKITL V+N  DL+RDVIKSD+AGV +PEL+LELA GTLGG+VTTV
Sbjct: 322 NSELKPGGAIPEKGKKITLSVRNITDLSRDVIKSDTAGVIIPELDLELAGGTLGGMVTTV 381

Query: 394 EGLIVKICEALQRVHGFHLGDSTLEWKKKKWEDFNDRLSKLLSLQEPWTLIIDDGLAASF 453
           EGL+ +I E+L RVHGF  GDS  E K  KW +F  RL+KLLS ++PWTLI+DD LA SF
Sbjct: 382 EGLVTQIRESLARVHGFTFGDSMEESKLNKWREFGARLTKLLSFEQPWTLILDDELANSF 441

Query: 454 VAPATDSLEDDNQLTIEEYVRSWEQNEELGLNDMDTSSADAAYNTT 499
           +AP TD ++DD+QLT EEY RSW+QNEELGLND+DTSSADAAY +T
Sbjct: 442 IAPVTDDIKDDHQLTFEEYERSWDQNEELGLNDIDTSSADAAYEST 487



>AT5G37340.2 | chr5:14787488-14792373 REVERSE LENGTH=499
          Length = 498

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/473 (65%), Positives = 372/473 (78%), Gaps = 10/473 (2%)

Query: 34  PLHEIESLCMRCGDNGTTRLLMTMIPHFREVVLMAFECPHCGERNNEVQFAGQLQPKGCC 93
           PL+ +ES+CMRCG+NGTTR L+T+IPHFR+V++ AFECPHCGERNNEVQFAG++QP+GC 
Sbjct: 27  PLYVVESMCMRCGENGTTRFLLTLIPHFRKVLISAFECPHCGERNNEVQFAGEIQPRGCS 86

Query: 94  YRLEVPRGQNEILNRQVVKSDSATIKIPELDFEIPPEAQRGSLSTVEGIIMRAVDELQAL 153
           Y LEV  G  +  +RQVVKS+SATIKIPELDFEIPPEAQ GSLSTVEGI+ RA DEL AL
Sbjct: 87  YHLEVSAGDVKTFDRQVVKSESATIKIPELDFEIPPEAQSGSLSTVEGILSRAADELSAL 146

Query: 154 QDERKKVDPQKAEAIDKFLAKLRSLGLGEAAFTFVLDDPAGNSFIENQNAPSSDPLLSVR 213
           Q+ER+KVDP+ AEAID+FL+KLR+    E +FTF+LDDPAGNSFIEN +APS DP L+++
Sbjct: 147 QEERRKVDPKTAEAIDQFLSKLRACAKAETSFTFILDDPAGNSFIENPHAPSLDPSLTIK 206

Query: 214 FYERMREQQAALGFLVEPSTEEPGDQPVNHASTVEGNSEVLQEPHGSVGAVAGRRAIAQG 273
           FYER  EQQA LG+L  PS     ++ +   ST     +    PHG++GA AG RAIAQ 
Sbjct: 207 FYERTPEQQATLGYLTNPSQTGQSERSLGTPST-----QTTALPHGTIGATAGHRAIAQS 261

Query: 274 NPDEVAAALCRYSAPEEVDTLPSTCGACGTECVTRFFATKI-----PYFREVIVMATTCD 328
           N  +++  L RYSAPEEV T PSTCGAC   C TR F T I         EVIVMA+TCD
Sbjct: 262 NSTDISDNLFRYSAPEEVMTFPSTCGACTKLCETRMFVTSILSKLCSRSLEVIVMASTCD 321

Query: 329 MCGYRNSELKPGGEIPAKGKKITLRVQNGKDLTRDVIKSDSAGVKVPELELELASGTLGG 388
            CGYRNSELKPGG IP KGKKITL V+N  DL+RDVIKSD+AGVK+PEL+LELA GTLGG
Sbjct: 322 DCGYRNSELKPGGAIPEKGKKITLSVKNITDLSRDVIKSDTAGVKIPELDLELAGGTLGG 381

Query: 389 IVTTVEGLIVKICEALQRVHGFHLGDSTLEWKKKKWEDFNDRLSKLLSLQEPWTLIIDDG 448
           +VTTVEGL+ +I E+L RVHGF  GDS  + K  KW++F  RL+KLLSL++ WTLI+DD 
Sbjct: 382 MVTTVEGLVTQIRESLARVHGFTFGDSLEQSKINKWKEFGSRLTKLLSLEQEWTLILDDE 441

Query: 449 LAASFVAPATDSLEDDNQLTIEEYVRSWEQNEELGLNDMDTSSADAAYNTTNP 501
           LA SF++P TD ++DD+QLT EEY RSWEQNEELGLND+DTSSADAAY +T P
Sbjct: 442 LANSFISPVTDDIKDDHQLTFEEYERSWEQNEELGLNDIDTSSADAAYESTEP 494




 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 112/220 (50%), Gaps = 15/220 (6%)

Query: 270 IAQGNPDEVAAALCRYSAPEEVDTLPSTCGACGTECVTRFFATKIPYFREVIVMATTCDM 329
           I  G+  E  +A   + AP  V  + S C  CG    TRF  T IP+FR+V++ A  C  
Sbjct: 9   IDVGSVVEAVSADHSFGAPLYV--VESMCMRCGENGTTRFLLTLIPHFRKVLISAFECPH 66

Query: 330 CGYRNSELKPGGEIPAKGKKITLRVQNG--KDLTRDVIKSDSAGVKVPELELELASGTLG 387
           CG RN+E++  GEI  +G    L V  G  K   R V+KS+SA +K+PEL+ E+      
Sbjct: 67  CGERNNEVQFAGEIQPRGCSYHLEVSAGDVKTFDRQVVKSESATIKIPELDFEIPPEAQS 126

Query: 388 GIVTTVEGLIVKICEALQRVHGFHLGDSTLEWKKKKWEDFNDRLSKLLSL---QEPWTLI 444
           G ++TVEG++ +  + L       L +   +   K  E  +  LSKL +    +  +T I
Sbjct: 127 GSLSTVEGILSRAADELSA-----LQEERRKVDPKTAEAIDQFLSKLRACAKAETSFTFI 181

Query: 445 IDDGLAASFVA-PATDSLEDDNQLTIEEYVRSWEQNEELG 483
           +DD    SF+  P   SL  D  LTI+ Y R+ EQ   LG
Sbjct: 182 LDDPAGNSFIENPHAPSL--DPSLTIKFYERTPEQQATLG 219



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.315    0.133    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,731,931
Number of extensions: 456093
Number of successful extensions: 1201
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1188
Number of HSP's successfully gapped: 3
Length of query: 501
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 398
Effective length of database: 8,282,721
Effective search space: 3296522958
Effective search space used: 3296522958
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)