BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0471800 Os08g0471800|AK105281
(602 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G45207.2 | chr1:17130703-17133548 REVERSE LENGTH=556 205 7e-53
AT4G36970.1 | chr4:17429826-17431459 REVERSE LENGTH=428 130 2e-30
AT2G02170.1 | chr2:556595-558610 REVERSE LENGTH=487 65 8e-11
AT1G67590.1 | chr1:25333137-25334472 REVERSE LENGTH=348 62 1e-09
AT1G53860.1 | chr1:20107165-20109458 REVERSE LENGTH=443 53 6e-07
AT2G41870.1 | chr2:17471119-17472519 REVERSE LENGTH=275 52 1e-06
AT1G30320.1 | chr1:10680348-10682852 FORWARD LENGTH=510 51 2e-06
AT3G57540.1 | chr3:21301623-21302924 REVERSE LENGTH=297 50 3e-06
>AT1G45207.2 | chr1:17130703-17133548 REVERSE LENGTH=556
Length = 555
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 177/495 (35%), Positives = 246/495 (49%), Gaps = 84/495 (16%)
Query: 120 ECQDQRYRLGSVLFHGKNERKQRPASVDFGCPSVDRSSTHSPGFLVNGTGAMNKGLSVSS 179
ECQ++R R ++ K QR S+D + T + +VN K SVS+
Sbjct: 133 ECQERRSRSEAL---AKKLDYQRTVSLDLS------NVTSTSPRVVNV-----KRASVST 178
Query: 180 QNKPGAPTSPGTPSYNRQGATVVGYQQGWSSERVALSSNGQRRHSGNSMVLPHNTGRTLP 239
NK SPGTP+Y + Q+GWSSERV L SNG R N+ LP +GRT+P
Sbjct: 179 -NKSSVFPSPGTPTY------LHSMQKGWSSERVPLRSNGGR-SPPNAGFLPLYSGRTVP 230
Query: 240 SKWEDAERWIFSPNPSNALGRTSIPQS--RRPKAKSGPLGPPGRFSEPYXXXXXXXYLLD 297
SKWEDAERWI SP RTS S RRPKAKSGPLGPPG F+ Y ++
Sbjct: 231 SKWEDAERWIVSPLAKEGAARTSFGASHERRPKAKSGPLGPPG-FAY-YSLYSPAVPMVH 288
Query: 298 TGRVGNLTANSPFLAGVLLPEHVCVSSSHAGRDLSGASGEDKSNGMGGRSGEANGAHPAV 357
G +G LTA+SPF AGV LPE V G A P
Sbjct: 289 GGNMGGLTASSPFSAGV-LPETV------------------------SSRGSTTAAFP-- 321
Query: 358 WSTRVCQRMDSAVQSSPSLPTSQESVQACTDEQIEITTDLTTSSKPEISRKDVATQ-TXX 416
QR+D ++ S S+ E++ + + + I + + +SR+D+ATQ +
Sbjct: 322 ------QRIDPSMARSVSIHGCSETLASSSQDDIHESMKDAATDAQAVSRRDMATQMSPE 375
Query: 417 XXXXXXXXXXXXXXXXXXXVQQVKELESCFS-KLEIRDVQMDDRVTLTRWSKKHVTRGSE 475
+ EL + S + E++D+Q+D++VT+TRWSKKH RG
Sbjct: 376 GSIRFSPERQCSFSPSSPSPLPISELLNAHSNRAEVKDLQVDEKVTVTRWSKKH--RGLY 433
Query: 476 KNSTNIIEWKKKTVESKSSAWEVTETAKCISKIEGEEAKMTAWENLQKAKAEAAIQKL-- 533
+ + + + V K++ E A EEA++ +WENLQKAKAEAAI+KL
Sbjct: 434 HGNGSKM---RDHVHGKATNHEDLTCAT-------EEARIISWENLQKAKAEAAIRKLEK 483
Query: 534 ---VMKLEKKRSYSLERIFNTLRSAHRKTHVIRSTTTTNLDQHISRTVK-RPSHLSKNG- 588
MKLEKKRS S+E+I ++SA ++ +R + LD +S + S ++G
Sbjct: 484 YFPQMKLEKKRSSSMEKIMRKVKSAEKRAEEMRRSV---LDNRVSTASHGKASSFKRSGK 540
Query: 589 -QMSSLSGCFTCHAF 602
++ SLSGCFTCH F
Sbjct: 541 KKIPSLSGCFTCHVF 555
>AT4G36970.1 | chr4:17429826-17431459 REVERSE LENGTH=428
Length = 427
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 148/457 (32%), Positives = 211/457 (46%), Gaps = 87/457 (19%)
Query: 179 SQNKPGAPTSPGTPSYNRQGATVVGYQQGWSSERV--------ALSSNGQRRHSGNSMVL 230
S N G SPG PSY +GWSSERV + + NG RRH G+S L
Sbjct: 7 SSNSFGGFLSPGAPSY--------ADNKGWSSERVPHPSSTTSSSAINGGRRHIGSSSAL 58
Query: 231 --PHNTGRTLPSKWEDAERWIFSP---NPSNALGRTSIP-QSRRPKAKSGPLGPPGRFSE 284
P +GR +PSKWEDAERWI SP P +S+ + RR K+KSGP+ PP
Sbjct: 59 TTPFYSGRAIPSKWEDAERWICSPVSTYPQGVCLNSSVSSEQRRQKSKSGPIVPPTLPHP 118
Query: 285 P-----------YXXXXXXXYLLDTGRVGNLTANSPFLAGVLLPEHVCVSSSHAGRDLSG 333
+ +D G + A SPF GVL A R G
Sbjct: 119 HPTSSSSATGCYHYSPRMMMRSMDAPPKGLMVAGSPFSTGVL----------EADRVFRG 168
Query: 334 ASGEDKSNGMGGRSGEANGAHPAVWSTRVCQRMDSAVQSSPSLPTSQESVQACTDEQIEI 393
+ G +G G G H W + + TS S + T+E+ E+
Sbjct: 169 SVGGGGCDGYGRGPGHG---HSRSWVDLMSEE------------TSSLSSKTDTEEKAEM 213
Query: 394 TTDLTTSSKPEISRKDVATQTXXXXXXXXXXXXXXXXXXXXXVQQVKELESCFSKLEIRD 453
TT + + P +SR+D+ATQ V V E C + E+R+
Sbjct: 214 TTAMQS---PVVSRRDMATQMSPEETSPNNNNQSPPL-----VVSVIEPPPC--RGEVRE 263
Query: 454 VQMDDRVTLTRWSKKHVTRGSEKNSTNIIEWKKKTVESKSSA------WEVTETAKCISK 507
V+MD + + K+ V S+ II ++ VE S A W+++E A +SK
Sbjct: 264 VKMDKGARMIKRPKRRVM------SSRIIRREQPEVEDNSEASASSSSWDISEPAMTLSK 317
Query: 508 IEGEEAKMTAWENLQKAKAEAAIQKLVMKLEKKRSYSLERIFNTLRSAHRKTHVIRSTTT 567
++ EEAK+ AWENLQKAKAEAAI+KL +KLEKK+S S+++I N L++A K +R ++
Sbjct: 318 LQREEAKIAAWENLQKAKAEAAIRKLEVKLEKKKSASMDKILNKLQTAKIKAQEMRRSSV 377
Query: 568 TNL------DQHISRTVKRPSHL-SKNGQMSSLSGCF 597
++ + ISR + +HL ++ M+ CF
Sbjct: 378 SSEHEQQQGNHQISRNSVKITHLVRRHTFMTPFMTCF 414
>AT2G02170.1 | chr2:556595-558610 REVERSE LENGTH=487
Length = 486
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Query: 486 KKTVESKSSAWEVTETAKCISKIEGEEAKMTAWENLQKAKAEAAIQKLVMKLEKKRSYSL 545
K E++++AWE E AK +++ EE K+ AWEN QKAK+EA ++K +K+E+ + +
Sbjct: 370 KSVSEARATAWEEAEKAKHMARFRREEMKIQAWENHQKAKSEAEMKKTEVKVERIKGRAQ 429
Query: 546 ERIFNTLRSAHRKTHVIRSTTTTNLDQHISRTVKRPSHLSKNGQMSSLSGCFTCHAF 602
+R+ L + RK R+ D ++T K+ + + G++ SL F+C +F
Sbjct: 430 DRLMKKLATIERKAEEKRAAAEAKKDHQAAKTEKQAEQIRRTGKVPSL--LFSCFSF 484
>AT1G67590.1 | chr1:25333137-25334472 REVERSE LENGTH=348
Length = 347
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 489 VESKSSAWEVTETAKCISKIEGEEAKMTAWENLQKAKAEAAIQKLVMKLEKKRSYSLERI 548
+E+++ AW+ E AK +++ + EE K+ AWEN +K KAE ++K+ +K E+ ++ + E++
Sbjct: 229 MEARAMAWDEAERAKFMARYKREEVKIQAWENHEKRKAEMEMKKMEVKAERMKARAEEKL 288
Query: 549 FNTLRSAHRKTHVIRSTTTTNLDQHISRTVKRPSHLSKNGQM-SSLSGCF 597
N L + R R+ L++ +T ++ ++ ++G + SS S F
Sbjct: 289 ANKLAATKRIAEERRANAEAKLNEKAVKTSEKADYIRRSGHLPSSFSFSF 338
>AT1G53860.1 | chr1:20107165-20109458 REVERSE LENGTH=443
Length = 442
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 483 EWKKKTVESKSSAWE-VTETAKCISKIEGEEAKMTAWENLQKAKAEAAIQKLVMKLEKKR 541
E ++ ESK+ W+ + K + + EEAK+ AW NL+ AKAEA +KL +K++K R
Sbjct: 316 ELRRSVSESKAPLWDDEDDKIKFCQRYQREEAKIQAWVNLENAKAEAQSRKLEVKIQKMR 375
Query: 542 SYSLERIFNTLRSAHRKTHVIRSTTTTNLDQHISRTVK 579
S E++ + HR+ R+T QH+ + K
Sbjct: 376 SNLEEKLMKRMDMVHRRAEDWRATAR---QQHVEQMQK 410
>AT2G41870.1 | chr2:17471119-17472519 REVERSE LENGTH=275
Length = 274
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 485 KKKTVESKSSAWEVTETAKCISKIEGEEAKMTAWENLQKAKAEAAIQKLVMKLEKKRSYS 544
K++ VE+K +AW+ + AK ++ + E+A + W N Q KA + ++K+ KLE++++ +
Sbjct: 159 KREEVEAKITAWQTAKLAKINNRFKREDAVINGWFNEQVNKANSWMKKIERKLEERKAKA 218
Query: 545 LERIFNTLRSAHRKTHVIRSTTTTNLDQHISRTVK 579
+E+ N + A RK R+T +++ V+
Sbjct: 219 MEKTQNNVAKAQRKAEERRATAEAKRGTEVAKVVE 253
>AT1G30320.1 | chr1:10680348-10682852 FORWARD LENGTH=510
Length = 509
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 63/120 (52%)
Query: 483 EWKKKTVESKSSAWEVTETAKCISKIEGEEAKMTAWENLQKAKAEAAIQKLVMKLEKKRS 542
E +K E +++AWE E +K ++ + EE ++ AWE+ +KAK EA ++++ K+E+ ++
Sbjct: 389 EAQKIEFEKRATAWEEAEKSKHNARYKREEIRIQAWESQEKAKLEAEMRRIEAKVEQMKA 448
Query: 543 YSLERIFNTLRSAHRKTHVIRSTTTTNLDQHISRTVKRPSHLSKNGQMSSLSGCFTCHAF 602
+ +I + A +++ R+ + + V ++ + G++ + S C F
Sbjct: 449 EAEAKIMKKIALAKQRSEEKRALAEARKTRDAEKAVAEAQYIRETGRIPASSYKICCGWF 508
>AT3G57540.1 | chr3:21301623-21302924 REVERSE LENGTH=297
Length = 296
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 54/95 (56%)
Query: 485 KKKTVESKSSAWEVTETAKCISKIEGEEAKMTAWENLQKAKAEAAIQKLVMKLEKKRSYS 544
K++ VE+K +AW+ + AK ++ + ++A + W N Q +A + ++K+ KLE +R+ +
Sbjct: 181 KREEVEAKITAWQTAKVAKINNRFKRQDAVINGWLNEQVHRANSWMKKIERKLEDRRAKA 240
Query: 545 LERIFNTLRSAHRKTHVIRSTTTTNLDQHISRTVK 579
+E+ N + A RK R+T ++R ++
Sbjct: 241 MEKTQNKVAKAQRKAEERRATAEGKRGTEVARVLE 275
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.126 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,159,714
Number of extensions: 514018
Number of successful extensions: 1246
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 1222
Number of HSP's successfully gapped: 13
Length of query: 602
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 498
Effective length of database: 8,255,305
Effective search space: 4111141890
Effective search space used: 4111141890
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 115 (48.9 bits)