BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0467300 Os08g0467300|AK105541
(396 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G25240.1 | chr1:8845231-8846361 FORWARD LENGTH=377 199 3e-51
AT1G68110.1 | chr1:25524901-25526040 FORWARD LENGTH=380 167 7e-42
AT1G14686.1 | chr1:5045781-5046800 REVERSE LENGTH=340 143 2e-34
AT2G01920.1 | chr2:426052-426990 FORWARD LENGTH=313 119 2e-27
AT1G03050.1 | chr1:707726-709860 FORWARD LENGTH=600 66 3e-11
AT2G01600.1 | chr2:268975-272356 FORWARD LENGTH=572 60 2e-09
AT5G35200.1 | chr5:13462463-13465581 REVERSE LENGTH=545 60 3e-09
AT1G14910.1 | chr1:5139928-5143571 REVERSE LENGTH=693 57 3e-08
AT4G32285.1 | chr4:15586003-15587910 FORWARD LENGTH=636 54 2e-07
>AT1G25240.1 | chr1:8845231-8846361 FORWARD LENGTH=377
Length = 376
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 173/310 (55%), Gaps = 22/310 (7%)
Query: 50 IRATSHDERSVDYRSAARVFALARASPAVLQPLMWALARRAGRTRCWAVXXXXXXXXXXX 109
I ATSHD+ SVDY +A RV+ R+SPA L+PL+ AL+ R RTR W V
Sbjct: 38 IHATSHDDSSVDYHNAHRVYKWIRSSPANLKPLVHALSSRVNRTRSWIVALKALMLVHGV 97
Query: 110 XXRSDLAPRAARLGRVPFDLADFRDRSSSPTKTSGFSAFVRAYFHFLDTRSLFXXXXXXX 169
+ + R R+PFDL+DF D S P+KT GF+AF+RAYF FLD S F
Sbjct: 98 LCCKVTSLQEIR--RLPFDLSDFSDGHSRPSKTWGFNAFIRAYFSFLDQYSFFLSDQIRR 155
Query: 170 XXXXXXXXXXXXXXG-VSRLQHLLDLLMQIRPYGDGMEQGLILEAMDCVVIEIFEVYSQI 228
+ +LQ LL +L+QIRP D M++ LILEAMDCVVIEIF++Y +I
Sbjct: 156 RHKKPQLDSVNQELERIEKLQSLLHMLLQIRPMADNMKKTLILEAMDCVVIEIFDIYGRI 215
Query: 229 CTGIARFLVGVLGSAPTTPRPRPGETMAAARRRRGLQGMRVLRKASEQSAQLTSYFELCR 288
C+ IA+ L+ + AA + + +++++KA+ Q L YFE C+
Sbjct: 216 CSAIAKLLIKI---------------HPAAGKAEAVIALKIVKKATSQGEDLALYFEFCK 260
Query: 289 SLGVLNAAEFPAVERVPDDDIRDLEKLI--MSHVVEDRGKEKVSEEKALVAVEDTGVASR 346
GV NA + P +P++DI+ +EK+I + + +++V EEK+++ VE + +
Sbjct: 261 EFGVSNAHDIPKFVTIPEEDIKAIEKVINGVEEEEVKKKEDEVEEEKSIILVERPEL--Q 318
Query: 347 TVVTREWVVF 356
T++T +W +F
Sbjct: 319 TIITDKWEIF 328
>AT1G68110.1 | chr1:25524901-25526040 FORWARD LENGTH=380
Length = 379
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 157/316 (49%), Gaps = 30/316 (9%)
Query: 50 IRATSHDERSVDYRSAARVFALARASPAVLQPLMWALARRAGRTRCWAVXXXXXXXXXXX 109
I+ATSHD+ SVDY +A RV+ R+SP L+ L++A++ R TR W V
Sbjct: 39 IKATSHDDSSVDYSNAHRVYKWIRSSPLNLKTLVYAISSRVNHTRSWIVALKSLMLLHGV 98
Query: 110 XXRSDLAPRAARLGRVPFDLADFRDRSSSPTKTSGFSAFVRAYFHFLDTRSLFXXXXXXX 169
+ R+PFDL+DF D S +KT GF+ FVR YF FL S F
Sbjct: 99 LC-CKVPSVVGEFRRLPFDLSDFSDGHSCLSKTWGFNVFVRTYFAFLHHYSSFLSDQIHR 157
Query: 170 XXXXXXXXXXXXXXGV-------SRLQHLLDLLMQIRPYGDGMEQGLILEAMDCVVIEIF 222
V +LQ LLD+++QIRP D M++ LILEAMDC+VIE
Sbjct: 158 LRGNNRRSLEKTSDSVIQELERIQKLQSLLDMILQIRPVADNMKKTLILEAMDCLVIESI 217
Query: 223 EVYSQICTGIARFLVGVLGSAPTTPRPRPGETMAAARRRRGLQGMRVLRKASEQSAQLTS 282
+Y +IC + + L P G++ AA ++++ K + Q L
Sbjct: 218 NIYGRICGAVMKVL------------PLAGKSEAAT-------VLKIVNKTTSQGEDLIV 258
Query: 283 YFELCRSLGVLNAAEFPAVERVPDDDIRDLEKLI--MSHVVEDRGKEKVSEEKALVAVED 340
YFE C+ GV NA E P R+P++++ +EK+I + + E+ +EKA+V +E
Sbjct: 259 YFEFCKGFGVSNAREIPQFVRIPEEEVEAIEKMIDTVQEKPKLEKDEEKEDEKAMVVLEQ 318
Query: 341 TGVASRTVVTREWVVF 356
+T++T +W +F
Sbjct: 319 PK-KLQTIITDKWEIF 333
>AT1G14686.1 | chr1:5045781-5046800 REVERSE LENGTH=340
Length = 339
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 138/268 (51%), Gaps = 19/268 (7%)
Query: 50 IRATSHDERSVDYRSAARVFALARASPAVLQPLMWALARRAGRTRCWAVXXXXXXXXXXX 109
++ATSHDE S+D SA ++ +SP+ L+PL+ ++ R RTR WAV
Sbjct: 29 VKATSHDELSIDTESAQFIYRHVLSSPSSLKPLVSLISSRVKRTRSWAVALKGLMLMHGF 88
Query: 110 XXRSDLAPRAARLGRVPFDLADFRDRSSSP-TKTSGFSAFVRAYFHFLDTRSLFXXXXXX 168
A +GR+PFDL+ F + +S +K+ GF+ FVRAYF FLD RS+
Sbjct: 89 FLCKSTV--AESIGRLPFDLSSFGEGNSRIMSKSGGFNLFVRAYFAFLDRRSILFHDGNR 146
Query: 169 XXXXXXXXXXXXXXXGVSRLQHLLDLLMQIRPYGDGMEQGLILEAMDCVVIEIFEVYSQI 228
+ ++Q ++D L++I+P G+ M +I EAM+ VV EI E+Y I
Sbjct: 147 HRYNEESSVLIRLVI-IRKMQIIVDSLIRIKPIGENMMIPVINEAMENVVSEIMEIYGWI 205
Query: 229 CTGIARFLVGVLGSAPTTPRPRPGETMAAARRRRGLQGMRVLRKASEQSAQLTSYFELCR 288
C IA L V + G+T A ++++ K+ +Q +L YFE C+
Sbjct: 206 CRRIAEVLPNV--------HSKIGKTEADL-------ALKIVAKSMKQGGELKKYFEFCK 250
Query: 289 SLGVLNAAEFPAVERVPDDDIRDLEKLI 316
LGV NA E P R+P+ D+ L++L+
Sbjct: 251 DLGVSNAQEIPNFVRIPEADVIHLDELV 278
>AT2G01920.1 | chr2:426052-426990 FORWARD LENGTH=313
Length = 312
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 125/267 (46%), Gaps = 28/267 (10%)
Query: 50 IRATSHDERSVDYRSAARVFALARASPAVLQPLMWALARRAGRTRCWAVXXXXXXXXXXX 109
I+ATSH++ S+D + ++ +++P+ +P++ A++ R TR W V
Sbjct: 34 IKATSHNDVSMDIENVQFIYRYIQSNPSSFKPIIRAVSLRVEHTRNWTVALKCLMLLHGL 93
Query: 110 XXRSDLAPRAARLGRVPFDLADFRDRSSSPTKTSGFSAFVRAYFHFLDTRSLFXXXXXXX 169
+ + +GR+PFDL+ F R S ++T F+ FVRAYF FLD RS+
Sbjct: 94 FFSGIMTVDS--IGRLPFDLSGFGRRKSRFSRTGRFNIFVRAYFMFLDERSILYYNKNMI 151
Query: 170 XXXXXXXXXXXXXXGVSRLQHLLDLLMQIRPYGDGMEQGLILEAMDCVVIEIFEVYSQIC 229
+ ++Q ++D LM+I+P G E L++EAM+ V+ E+ + IC
Sbjct: 152 RLEI-----------IVKMQRIVDSLMRIKPIG---ETPLVIEAMEYVISEVVLINGHIC 197
Query: 230 TGIARFLVGVLGSAPTTPRPRPGETMAAARRRRGLQGMRVLRKASEQSAQLTSYFELCRS 289
G A FL V M M ++ K+ Q +L YFE CR
Sbjct: 198 RGFAGFLSDV------------QSNMLEISSAEADLAMNIVAKSLSQREKLFKYFEFCRG 245
Query: 290 LGVLNAAEFPAVERVPDDDIRDLEKLI 316
GV NA E + R+ + + L+KL+
Sbjct: 246 FGVTNAQETSNILRITESQMIVLDKLL 272
>AT1G03050.1 | chr1:707726-709860 FORWARD LENGTH=600
Length = 599
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 129/337 (38%), Gaps = 71/337 (21%)
Query: 50 IRATSHDERSVDYRSAARVFALARASPAVLQPLMWALARRAGRTRCWAVXXXXXXXXXXX 109
++AT H+E + + + +L S + + + L+RR +T+CW V
Sbjct: 39 VKATRHEEFPAEEKYIREILSLTSYSRSYINACVSTLSRRLNKTKCWTVALKTLILIQRL 98
Query: 110 XXRSDLAPR-----AARLGRVPFDLADFRDRSSSPTKTSGFSAFVRAYFHFLDTRSLF-- 162
D A A R G +++DFRD S S + +SAFVR Y +LD R F
Sbjct: 99 LGEGDQAYEQEIFFATRRGTRLLNMSDFRDVSRS--NSWDYSAFVRTYALYLDERLDFRM 156
Query: 163 ----------------------------XXXXXXXXXXXXXXXXXXXXXGVSRLQHLLDL 194
+ LQ LLD
Sbjct: 157 QARHGKRGVYCVGGEADEEEQDQAAADLSTAIVVRSQPIAEMKTEQIFIRIQHLQQLLDR 216
Query: 195 LMQIRPYGDGMEQGLILEAMDCVVIEIFEVYSQICTGIARFLVGVLGSAPTTPRPRPGET 254
+ RP G+ +++ A+ +V E F++Y + ++G+L E
Sbjct: 217 FLACRPTGNARNNRVVIVALYPIVKESFQIYYDVTE-----IMGIL-----------IER 260
Query: 255 MAAARRRRGLQGMRVLRKASEQSAQLTSYFELCRSLGVLNAAEFPAVERVP-------DD 307
++ + + S+Q +L ++ C+++G+ ++E+P +E++ D+
Sbjct: 261 FMELDIPDSIKVYDIFCRVSKQFEELDQFYSWCKNMGIARSSEYPEIEKITQKKLDLMDE 320
Query: 308 DIRD---LE-----KLIMSHVVEDRGK---EKVSEEK 333
IRD LE K + S ED + E+V+EE+
Sbjct: 321 FIRDKSALEHTKQSKSVKSEADEDDDEARTEEVNEEQ 357
>AT2G01600.1 | chr2:268975-272356 FORWARD LENGTH=572
Length = 571
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 110/293 (37%), Gaps = 48/293 (16%)
Query: 50 IRATSHDERSVDYRSAARVFAL-----ARASPAVLQPLMWALARRAGRTRCWAVXXXXXX 104
++AT+H E R ++FA ARA A + AL+RR +TR W V
Sbjct: 37 VKATNHVECPPKDRHLRKIFAATSVTRARADVAYC---IHALSRRLHKTRNWTVALKTLI 93
Query: 105 XXXXXXXRSDLAPRAARL-----GRVPFDLADFRDRSSSPTKTSGFSAFVRAYFHFLDTR 159
D R L GR+ L++F+D SSP SA+VR Y FL+ R
Sbjct: 94 VIHRLLREGDPTFREELLNFSQRGRI-LQLSNFKD-DSSPIAWDC-SAWVRTYALFLEER 150
Query: 160 -SLFXXXXXXXXXXXXXXXXXXXXXGVSR---------------LQHLLDLLMQIRPYGD 203
F G SR LQ LL L+ RP G
Sbjct: 151 LECFRVLKYDTEAERLPKSNPGQDKGYSRTRDLDGEELLEQLPALQQLLYRLIGCRPEGA 210
Query: 204 GMEQGLILEAMDCVVIEIFEVYSQICTGIARFLVGVLGSAPTTPRPRPGETMAAARRRRG 263
+I A+ V+ E F+VY I GI + A +
Sbjct: 211 ANHNHVIQYALALVLKESFKVYCAINDGIINLIDKFFEMA----------------KHEA 254
Query: 264 LQGMRVLRKASEQSAQLTSYFELCRSLGVLNAAEFPAVERVPDDDIRDLEKLI 316
+ + + ++A +Q+ L+ ++E C+ L + +FP + P + +E+ I
Sbjct: 255 ITSLEIYKRAGQQARSLSDFYEACKGLELARNFQFPVLREPPQSFLTTMEEYI 307
>AT5G35200.1 | chr5:13462463-13465581 REVERSE LENGTH=545
Length = 544
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 127/306 (41%), Gaps = 34/306 (11%)
Query: 50 IRATSHDERSVDYRSAARVF-ALARASP-AVLQPLMWALARRAGRTRCWAVXXXXXXXXX 107
++AT+H ER R +F A++ P A + + ALARR RT WAV
Sbjct: 41 VKATNHVERPSKERYIRAIFMAISATRPRADVAYCIHALARRLSRTHNWAVALKTLIVIH 100
Query: 108 XXXXRSDLA-----PRAARLGRVPFDLADFRDRSSSPTKTSGFSAFVRAYFHFLDTR--- 159
D +R +++ F+D S +SA+VR Y FL+ R
Sbjct: 101 RALREVDQTFHEEVINYSRSRSHMLNMSHFKDDSGP--NAWAYSAWVRFYALFLEERLEC 158
Query: 160 -SLFXXXXXXXXXXXXXXXXXXXXXGVSRLQHLLDLLMQIRPYGDGMEQGLILEAMDCVV 218
+ + LQ LL ++ +P G ++ +I A+ V+
Sbjct: 159 FRVLKYDVEVDPPRTKDLDTPDLLEQLPALQELLFRVLDCQPEGAAVQNHIIQLALSMVI 218
Query: 219 IEIFEVYSQICTGIARFLVGVLGSAPTTPRPRPGETMAAARRRRGLQGMRVLRKASEQSA 278
E ++Y + GI + + +R ++ + + R+A +Q+
Sbjct: 219 SESTKIYQALTDGIDNLV----------------DKFFDMQRNDAVKALDMYRRAVKQAG 262
Query: 279 QLTSYFELCRSLGVLNAAEFPAVERVPDDDIRDLEKLIM-----SHVVEDRGKEKVSEEK 333
+L+ +FE+C+S+ V F +E+ P ++ +E+ + + V +++ EK++ K
Sbjct: 263 RLSEFFEVCKSVNVGRGERFIKIEQPPTSFLQAMEEYVKEAPLAAGVKKEQVVEKLTAPK 322
Query: 334 ALVAVE 339
++A+E
Sbjct: 323 EILAIE 328
>AT1G14910.1 | chr1:5139928-5143571 REVERSE LENGTH=693
Length = 692
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 110/290 (37%), Gaps = 42/290 (14%)
Query: 50 IRATSHDERSVDYRSAARVF-ALARASP-AVLQPLMWALARRAGRTRCWAVXXXXXXXXX 107
++AT+H E R ++F A + P A + + AL+RR +TR W V
Sbjct: 37 VKATNHVECPPKDRHLRKIFLATSAIRPRADVAYCIHALSRRLHKTRNWTVALKALLVIH 96
Query: 108 XXXXRSDLAPRAARL-----GRVPFDLADFRDRSSSPTKTSGFSAFVRAYFHFLDTR-SL 161
D R L GR+ +++F+D SS S +VR Y FL+ R
Sbjct: 97 RLLRDGDPTFREELLNFSQKGRI-MQISNFKDDSSP--VAWDCSGWVRTYALFLEERLEC 153
Query: 162 FXXXXXXXXXXXXXXXXXXXXXGVSR---------------LQHLLDLLMQIRPYGDGME 206
F G S+ LQ LL L+ +P G
Sbjct: 154 FRVLKYDIEAERLPKVSPGQEKGYSKTRDLDGEKLLEQLPALQQLLHRLIGCKPEGAAKH 213
Query: 207 QGLILEAMDCVVIEIFEVYSQICTGIARFLVGVLGSAPTTPRPRPGETMAAARRRRGLQG 266
+I A+ V+ E F+VY I GI + E R ++
Sbjct: 214 NHIIQYALSLVLKESFKVYCAINEGIINLV----------------EKFFEMPRHEAIKA 257
Query: 267 MRVLRKASEQSAQLTSYFELCRSLGVLNAAEFPAVERVPDDDIRDLEKLI 316
+ + ++A Q+ L++++E+C+ L + +FP + P + +E+ +
Sbjct: 258 LEIYKRAGLQAGNLSAFYEVCKGLELARNFQFPVLREPPQSFLTTMEEYM 307
>AT4G32285.1 | chr4:15586003-15587910 FORWARD LENGTH=636
Length = 635
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 185 VSRLQHLLDLLMQIRPYGDGMEQGLILEAMDCVVIEIFEVYSQICTGIARFLVGVLGSAP 244
+ LQ LLD + RP G +IL AM VV E F +Y+ IC +A L
Sbjct: 238 MGHLQRLLDRFLSCRPTGLAKNSRMILIAMYPVVKESFRLYADICEVLAVLLDKFFDMEY 297
Query: 245 TTPRPRPGETMAAARRRRGLQGMRVLRKASEQSAQLTSYFELCRSLGVLNAAEFPAVERV 304
T ++ A++Q +L +++ C+ GV ++E+P V+R+
Sbjct: 298 TD----------------CVKAFDAYASAAKQIDELIAFYHWCKDTGVARSSEYPEVQRI 341
Query: 305 PDDDIRDLEKLIMSHVVEDRGKEKVSEEK 333
+ LE+ V DR K S E+
Sbjct: 342 TSKLLETLEEF-----VRDRAKRAKSPER 365
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,258,485
Number of extensions: 210461
Number of successful extensions: 667
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 659
Number of HSP's successfully gapped: 9
Length of query: 396
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 295
Effective length of database: 8,337,553
Effective search space: 2459578135
Effective search space used: 2459578135
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 113 (48.1 bits)