BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0459400 Os08g0459400|Os08g0459400
(705 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G41980.1 | chr5:16793765-16794889 FORWARD LENGTH=375 248 6e-66
AT1G43722.1 | chr1:16496403-16497377 FORWARD LENGTH=325 163 2e-40
AT5G35695.1 | chr5:13869120-13869941 FORWARD LENGTH=212 140 2e-33
AT5G28730.1 | chr5:10779003-10780218 FORWARD LENGTH=297 103 3e-22
AT5G28950.1 | chr5:10992505-10993435 FORWARD LENGTH=149 97 2e-20
AT3G55350.1 | chr3:20518518-20520690 FORWARD LENGTH=407 95 2e-19
AT4G10890.1 | chr4:6688833-6692937 FORWARD LENGTH=528 68 1e-11
AT3G63270.1 | chr3:23375932-23377398 REVERSE LENGTH=397 68 2e-11
AT5G12010.1 | chr5:3877975-3879483 REVERSE LENGTH=503 59 7e-09
>AT5G41980.1 | chr5:16793765-16794889 FORWARD LENGTH=375
Length = 374
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 169/292 (57%), Gaps = 14/292 (4%)
Query: 92 LYNGSDTTCISQLRMRKEVFWKLASKLRDNGLLCDTIHVSVEEQLAMFLHTVGHNLRNRV 151
+ NG + C RM K VF+KL L+ GLL T + +E QLA+FL +GHNLR R
Sbjct: 34 ILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRA 93
Query: 152 IGFYVIRSSETVSRYFNEVLKALCCLAKDMIQIRSIETHSKIVSNPGRFYPYFEDCIGAL 211
+ S ET+SR+FN VL A+ ++KD Q S +S + N PYF+DC+G +
Sbjct: 94 VQELFCYSGETISRHFNNVLNAVIAISKDFFQPNS---NSDTLENDD---PYFKDCVGVV 147
Query: 212 DGTHIPAFVPENIVNRFRGRKSYPTQNVLAAVDFDLRFTYVLVGWEGSAHDSVVLKAALR 271
D HIP V + FR TQNVLAA FDLRF YVL GWEGSA D VL AAL
Sbjct: 148 DSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALT 207
Query: 272 RSSGIQIPEGKYYLADAGYAARPGILPPFRGVRYHLKEYEGGKSPETPQELFNLRHSSLR 331
R + +Q+P+GKYY+ D Y PG + P+ GV S E +E+FN RH L
Sbjct: 208 RRNKLQVPQGKYYIVDNKYPNLPGFIAPYHGV--------STNSREEAKEMFNERHKLLH 259
Query: 332 TSVERAFGTLKNRFKVLASKPFFPYKVQVKIVIACCVLHNWILDNGPDNIIY 383
++ R FG LK RF +L S P +P + QVK+VIA C LHN++ PD++++
Sbjct: 260 RAIHRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLEKPDDLVF 311
>AT1G43722.1 | chr1:16496403-16497377 FORWARD LENGTH=325
Length = 324
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 139/258 (53%), Gaps = 9/258 (3%)
Query: 98 TTCISQLRMRKEVFWKLASKLRDNGLLCDTIHVSVEEQLAMFLHTVGHNLRNRVIGFYVI 157
C+ LRM F L + L+ N L T+++S+EE +AMFL GHN R +G
Sbjct: 64 AACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVYRDVGLRFG 123
Query: 158 RSSETVSRYFNEVLKALCCLAKDMIQIRSIETHSKI---VSNPGRFYPYFEDCIGALDGT 214
R+ ETV R F EVL A LA D I+ + + +I + R++PYF +GA+DGT
Sbjct: 124 RNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSGFVGAMDGT 183
Query: 215 HIPAFVPENIVNRFRGRKSYPTQNVLAAVDFDLRFTYVLVGWEGSAHDSVVLKAALRRSS 274
H+ V ++ + R + N++A D + FTY+ G GS +D+ VL+ A + S
Sbjct: 184 HVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVLQIAQQSDS 243
Query: 275 GIQIPEG-KYYLADAGYAARPGILPPFRG-----VRYHLKEYEGGKSPETPQELFNLRHS 328
+P KYYL D+GY + G+L P+R VRYH+ ++ G P ELFN H+
Sbjct: 244 EFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFYYGPRPRNKHELFNQCHT 303
Query: 329 SLRTSVERAFGTLKNRFK 346
SLR+ +ER F KN+ +
Sbjct: 304 SLRSVIERTFRIWKNKME 321
>AT5G35695.1 | chr5:13869120-13869941 FORWARD LENGTH=212
Length = 211
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 81/126 (64%), Gaps = 11/126 (8%)
Query: 249 FTYVLVGWEGSAHDSVVLKAALRRSSGIQIPEGKYYLADAGYAARPGILPPFRGVRYHLK 308
F YVL GWEGSAHDS VL ALR K+YL D G+A R L PFRGVRYHL+
Sbjct: 25 FIYVLSGWEGSAHDSRVLSDALR----------KFYLVDCGFANRLNFLAPFRGVRYHLQ 74
Query: 309 EYEGGK-SPETPQELFNLRHSSLRTSVERAFGTLKNRFKVLASKPFFPYKVQVKIVIACC 367
E+ G + PETP ELFNLRH SLR +ER FG K+RF + S P F YK Q +V+ C
Sbjct: 75 EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 134
Query: 368 VLHNWI 373
LHN++
Sbjct: 135 ALHNFL 140
>AT5G28730.1 | chr5:10779003-10780218 FORWARD LENGTH=297
Length = 296
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 28/211 (13%)
Query: 95 GSDTTCISQLRMRKEVFWKLASKLRDNGLLCDTIHVSVEEQLAMFLHTVGHNLRNRVIGF 154
++ +C + +RM E F +L L L + ++S++E +A+FL N R I
Sbjct: 19 SNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDIAL 78
Query: 155 YVIRSSETVSRYFNEVLKALCCLAKDMIQIRSIETHSKI---VSNPGRFYPYFEDCIGAL 211
+ ET+ R F++VLKA+ LA + I+ R +E I + + R++P+ D +G
Sbjct: 79 RFGHAQETIWRKFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRYWPFLMDLLG-- 136
Query: 212 DGTHIPAFVPENIVNRFRGRKSYPTQNVLAAVDFDLRFTYVLVGWEGSAHDSVVLKAALR 271
I +F NVLA D D+ FTY VG GS HD+ VL AA+
Sbjct: 137 ----IASF------------------NVLAICDLDMLFTYCFVGMAGSTHDARVLSAAIS 174
Query: 272 RSSGIQI-PEGKYYLADAGYAARPGILPPFR 301
+ P+ KYYL D+GYA + G L P+R
Sbjct: 175 DDPLFHVPPDSKYYLVDSGYANKRGYLAPYR 205
>AT5G28950.1 | chr5:10992505-10993435 FORWARD LENGTH=149
Length = 148
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%)
Query: 199 RFYPYFEDCIGALDGTHIPAFVPENIVNRFRGRKSYPTQNVLAAVDFDLRFTYVLVGWEG 258
R YPYF+DC+GA+D THI A V + + FR RK +QN+LAA +FD+ F YVL GWEG
Sbjct: 17 RLYPYFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEG 76
Query: 259 SAHDSVVLKAALRRSSG 275
SAHDS VL AL R+S
Sbjct: 77 SAHDSKVLNDALTRNSN 93
>AT3G55350.1 | chr3:20518518-20520690 FORWARD LENGTH=407
Length = 406
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 136/286 (47%), Gaps = 40/286 (13%)
Query: 130 VSVEEQLAMFLHTVGHNLRNRVIGFYVIRSSETVSRYFNEVLKALCCLAKDMIQIRSIET 189
+S+ +++A+ L +G VIG + TVS+ ++++ A I +
Sbjct: 109 LSLNDRVAVALRRLGSGESLSVIGETFGMNQSTVSQITWRFVESMEERA-----IHHLSW 163
Query: 190 HSKIVSNPGRFYPY--FEDCIGALDGTHI----PAFVPENIVNRFRGRKSYPTQNVLAAV 243
SK+ +F +C GA+D THI PA P N V G K++ + + A V
Sbjct: 164 PSKLDEIKSKFEKISGLPNCCGAIDITHIVMNLPAVEPSNKV-WLDGEKNF-SMTLQAVV 221
Query: 244 DFDLRFTYVLVGWEGSAHDSVVLKAAL--------RRSSGIQIPEGK------YYLADAG 289
D D+RF V+ GW GS +D VVLK + +R +G ++P + Y + D+G
Sbjct: 222 DPDMRFLDVIAGWPGSLNDDVVLKNSGFYKLVEKGKRLNGEKLPLSERTELREYIVGDSG 281
Query: 290 YAARPGILPPFRGVRYHLKEYEGGKSPETPQELFNLRHSSLRTSVERAFGTLKNRFKVLA 349
+ P +L P++G K PQ FN RHS + + A LK+R++++
Sbjct: 282 FPLLPWLLTPYQG-----------KPTSLPQTEFNKRHSEATKAAQMALSKLKDRWRIIN 330
Query: 350 SKPFFPYKVQV-KIVIACCVLHNWILDNGPDNIIYDEARWYIHNMD 394
+ P + ++ +I+ CC+LHN I+D D + D+ H+M+
Sbjct: 331 GVMWMPDRNRLPRIIFVCCLLHNIIIDM-EDQTLDDQPLSQQHDMN 375
>AT4G10890.1 | chr4:6688833-6692937 FORWARD LENGTH=528
Length = 527
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 260 AHDSVVLKAALRRSSGIQIPEG-KYYLADAGYAARPGILPPFRGVRYHLKEYEGGKSPET 318
+HD+ VLK R S P KYYL ++ Y G L P R + YHL ++ G P T
Sbjct: 71 SHDTKVLKYCARNESFSPHPSNRKYYLVNSVYPTTTGYLGPHRRILYHLGQFGRGGPPVT 130
Query: 319 PQELFNLRHSSLRTSVERAFGTLKNRFKVL 348
QELFN +H LR+ ++R FG K ++++L
Sbjct: 131 VQELFNRKHLDLRSVIDRTFGVWKAKWRIL 160
>AT3G63270.1 | chr3:23375932-23377398 REVERSE LENGTH=397
Length = 396
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 12/256 (4%)
Query: 130 VSVEEQLAMFLHTVGHNLRNRVIGFYVIRSSETVSRYFNEVLKALCCLAKDMIQIRSIET 189
+SVE+Q+A+ L + +G TVS+ ++AL AK ++ +
Sbjct: 103 LSVEKQVAIALRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIEALEERAKHHLRWPDSDR 162
Query: 190 HSKIVSNPGRFYPYFEDCIGALDGTHIPAFVPE-NIVNRFRGRKSYPTQNVLAAVDFDLR 248
+I S Y +C GA+D THI +P + + ++ + + D ++R
Sbjct: 163 IEEIKSKFEEMYG-LPNCCGAIDTTHIIMTLPAVQASDDWCDQEKNYSMFLQGVFDHEMR 221
Query: 249 FTYVLVGWEGSAHDSVVLKAA--LRRSSGIQIPEGKYYLADAGYAARPGILPPFRGVRYH 306
F ++ GW G S +LK + + QI +G G R ++ G+ Y
Sbjct: 222 FLNMVTGWPGGMTVSKLLKFSGFFKLCENAQILDGNPKTLSQGAQIREYVV---GGISYP 278
Query: 307 LKEY----EGGKSPETPQELFNLRHSSLRTSVERAFGTLKNRFKVLASKPFFPYKVQV-K 361
L + P FN RH +R+ AF LK +++L+ + P + ++
Sbjct: 279 LLPWLITPHDSDHPSDSMVAFNERHEKVRSVAATAFQQLKGSWRILSKVMWRPDRRKLPS 338
Query: 362 IVIACCVLHNWILDNG 377
I++ CC+LHN I+D G
Sbjct: 339 IILVCCLLHNIIIDCG 354
>AT5G12010.1 | chr5:3877975-3879483 REVERSE LENGTH=503
Length = 502
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 206 DCIGALDGTHIPAFVPENIVNRF-------RGRKSYPTQNVLAAVDFDLRFTYVLVGWEG 258
+ +G++ THIP P+ V + R +K+ + + A V+ FT + +GW G
Sbjct: 284 NVVGSMYTTHIPIIAPKISVASYFNKRHTERNQKTSYSITIQAVVNPKGVFTDLCIGWPG 343
Query: 259 SAHDSVVLKAAL--RRSSGIQIPEGKYYLADAGYAARPGILPPFRGVRYHLKEYEGGKSP 316
S D VL+ +L +R++ + +G + G+ +L P+ ++
Sbjct: 344 SMPDDKVLEKSLLYQRANNGGLLKGMWVAGGPGHPLLDWVLVPYTQ-----------QNL 392
Query: 317 ETPQELFNLRHSSLRTSVERAFGTLKNRFKVLASKPFFPYKVQVKIVIACCVLHN 371
Q FN + S ++ + AFG LK R+ L + + ++ ACCVLHN
Sbjct: 393 TWTQHAFNEKMSEVQGVAKEAFGRLKGRWACLQKRTEVKLQDLPTVLGACCVLHN 447
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,653,008
Number of extensions: 664243
Number of successful extensions: 1426
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 1412
Number of HSP's successfully gapped: 9
Length of query: 705
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 599
Effective length of database: 8,200,473
Effective search space: 4912083327
Effective search space used: 4912083327
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)