BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0441600 Os08g0441600|AK069725
         (284 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G10870.1  | chr5:3430691-3432272 REVERSE LENGTH=266            264   5e-71
AT1G69370.1  | chr1:26080098-26081559 FORWARD LENGTH=317          223   8e-59
AT3G29200.1  | chr3:11164582-11166258 REVERSE LENGTH=341          223   1e-58

>AT5G10870.1 | chr5:3430691-3432272 REVERSE LENGTH=266
          Length = 265

 Score =  264 bits (674), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 132/252 (52%), Positives = 172/252 (68%), Gaps = 6/252 (2%)

Query: 33  DTVREFLTREEDTVVFGLIERAKHPRNTPAYDPGYLAGGGHGHDASFAEMFVRESEAVQA 92
           D +RE L R+EDT+VF LIERAK P N+PA++       G    +S  E FVRE+E +QA
Sbjct: 20  DLIRESLIRQEDTIVFSLIERAKFPLNSPAFEESRCLDSGSF--SSLTEFFVRETEIIQA 77

Query: 93  KAGRYQSLQEIPFFPFRVPFTLAPPYNFTTELYSAAALVNVNDAIWSMYFNELLPLLAKN 152
           K GRY+  +E PFF   +P ++ P + + + L+  A  VN+N  IW +YF ELLPL  K 
Sbjct: 78  KVGRYEYPEENPFFLENIPHSVFPTHKYPSALHPKALSVNINKQIWDIYFKELLPLFVKP 137

Query: 153 GDDGNYAATVSSDLVCLQALSRRINYGRYVAEVKFIGDQQNYTTLIRNKDTDALMKLLTS 212
           GDDGNY +T +SDL CLQALSRRI+YG++VAEVKF    Q+Y   IR +D +ALMKLLT 
Sbjct: 138 GDDGNYPSTAASDLACLQALSRRIHYGKFVAEVKFRDAPQDYEPAIRAQDREALMKLLTF 197

Query: 213 EAQEDVVKRRVQKKAMVFGQNVTLDGPVETGNSNSSQTSFKVDPSLVYKLYDKWVIPLTK 272
           E  E++VK+RVQKKA  FGQ V  +    +G  + S+  +KVDP L  ++Y +W+IPLTK
Sbjct: 198 EKVEEMVKKRVQKKAETFGQEVKFN----SGYGDESKKKYKVDPLLASRIYGEWLIPLTK 253

Query: 273 QVEVEYLLHRLD 284
            VEVEYLL RLD
Sbjct: 254 LVEVEYLLRRLD 265



>AT1G69370.1 | chr1:26080098-26081559 FORWARD LENGTH=317
          Length = 316

 Score =  223 bits (568), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 110/252 (43%), Positives = 159/252 (63%), Gaps = 7/252 (2%)

Query: 33  DTVREFLTREEDTVVFGLIERAKHPRNTPAYDPGYLAGGGHGHDASFAEMFVRESEAVQA 92
           +++R  L R+ED+++F L+ERA++  N   YD    A    G   S  E  VRE+E + A
Sbjct: 72  ESIRHSLIRQEDSIIFNLLERAQYRYNADTYDED--AFTMEGFQGSLVEFMVRETEKLHA 129

Query: 93  KAGRYQSLQEIPFFPFRVPFTLAPPYNFTTELYSAAALVNVNDAIWSMYFNELLPLLAKN 152
           K  RY+S  E PFFP  +P  + PP  +   L+  A  +N+N  +W+MYF  LLP L K 
Sbjct: 130 KVDRYKSPDEHPFFPQCLPEPILPPIQYPQVLHRCAESININKKVWNMYFKHLLPRLVKP 189

Query: 153 GDDGNYAATVSSDLVCLQALSRRINYGRYVAEVKFIGDQQNYTTLIRNKDTDALMKLLTS 212
           GDDGN  +    D +CLQ LS+RI++G++VAE KF  +   Y T I+ +D   LM+LLT 
Sbjct: 190 GDDGNCGSAALCDTMCLQILSKRIHFGKFVAEAKFRENPAAYETAIKEQDRTQLMQLLTY 249

Query: 213 EAQEDVVKRRVQKKAMVFGQNVTLDGPVETGNSNSSQTSFKVDPSLVYKLYDKWVIPLTK 272
           E  E+VVK+RV+ KA +FGQ++T++ P        +  S+K+ PSLV KLY + ++PLTK
Sbjct: 250 ETVEEVVKKRVEIKARIFGQDITINDP-----ETEADPSYKIQPSLVAKLYGERIMPLTK 304

Query: 273 QVEVEYLLHRLD 284
           +V++EYLL RLD
Sbjct: 305 EVQIEYLLRRLD 316



>AT3G29200.1 | chr3:11164582-11166258 REVERSE LENGTH=341
          Length = 340

 Score =  223 bits (568), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 110/252 (43%), Positives = 155/252 (61%), Gaps = 4/252 (1%)

Query: 35  VREFLTREEDTVVFGLIERAKHPRNTPAYDPGYLAGGGHGHDASFAEMFVRESEAVQAKA 94
           +R  L R+ED+++FGL+ERAK+  N   YDP   A    G + S  E  V+ +E + AK 
Sbjct: 91  IRNSLIRQEDSIIFGLLERAKYCYNADTYDP--TAFDMDGFNGSLVEYMVKGTEKLHAKV 148

Query: 95  GRYQSLQEIPFFPFRVPFTLAPPYNFTTELYSAAALVNVNDAIWSMYFNELLPLLAKNGD 154
           GR++S  E PFFP  +P  + PP  +   L+ AA  +N+N  IW+MYF +L+P L K GD
Sbjct: 149 GRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVPRLVKKGD 208

Query: 155 DGNYAATVSSDLVCLQALSRRINYGRYVAEVKFIGDQQNYTTLIRNKDTDALMKLLTSEA 214
           DGNY +T   D +CLQ LS+RI+YG++VAE KF    + Y + I+ +D DALM +LT   
Sbjct: 209 DGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDALMDMLTFPT 268

Query: 215 QEDVVKRRVQKKAMVFGQNVTLDGPVETGNSNSSQTS--FKVDPSLVYKLYDKWVIPLTK 272
            ED +K+RV+ K   +GQ V +    +         S  +K+ P LV  LY  W++PLTK
Sbjct: 269 VEDAIKKRVEMKTRTYGQEVKVGMEEKEEEEEEGNESHVYKISPILVGDLYGDWIMPLTK 328

Query: 273 QVEVEYLLHRLD 284
           +V+VEYLL RLD
Sbjct: 329 EVQVEYLLRRLD 340



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.134    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,648,019
Number of extensions: 220820
Number of successful extensions: 572
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 566
Number of HSP's successfully gapped: 3
Length of query: 284
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 187
Effective length of database: 8,447,217
Effective search space: 1579629579
Effective search space used: 1579629579
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)