BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0431300 Os08g0431300|AK070015
(475 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G25860.1 | chr3:9460632-9462585 FORWARD LENGTH=481 540 e-154
AT1G34430.1 | chr1:12588027-12590084 REVERSE LENGTH=466 367 e-102
AT1G54220.1 | chr1:20246460-20250208 REVERSE LENGTH=540 171 1e-42
AT3G52200.2 | chr3:19360317-19366091 FORWARD LENGTH=714 154 1e-37
AT3G13930.1 | chr3:4596240-4600143 FORWARD LENGTH=540 128 8e-30
AT3G06850.1 | chr3:2158212-2160465 REVERSE LENGTH=484 106 2e-23
AT4G26910.1 | chr4:13520127-13522889 REVERSE LENGTH=465 91 1e-18
AT5G55070.1 | chr5:22347637-22350409 FORWARD LENGTH=465 90 3e-18
>AT3G25860.1 | chr3:9460632-9462585 FORWARD LENGTH=481
Length = 480
Score = 540 bits (1390), Expect = e-154, Method: Compositional matrix adjust.
Identities = 283/432 (65%), Positives = 326/432 (75%), Gaps = 6/432 (1%)
Query: 45 KIREIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVL 104
KIREIFMPALSSTMTEGKIVSW EG+++AKG++VVVVESDKADMDVETF+DG +AA++
Sbjct: 54 KIREIFMPALSSTMTEGKIVSWIKTEGEKLAKGESVVVVESDKADMDVETFYDGYLAAIV 113
Query: 105 VPAGESAPVGAPIALLAESEDDLQAALAKAQELSKAHPQQXXXXXXXXXXXXXXXXXXXX 164
V GE+APVGA I LLAE+E +++ A +KA S + +
Sbjct: 114 VGEGETAPVGAAIGLLAETEAEIEEAKSKAASKSSSSVAEAVVPSPPPVTSSPAPAIAQP 173
Query: 165 XXXXXXXXXGTKGIATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIEXXXXXX 224
K +ATP AKKLAKQH+VD+ VAGTGPFGRIT +DVE AAGI
Sbjct: 174 APVTAVSDGPRKTVATPYAKKLAKQHKVDIESVAGTGPFGRITASDVETAAGI-----AP 228
Query: 225 XXXXXXXXXXXXXXIGAVPQAAELPPV-PGATVVPFTGMQAAVSKNMVESLAVPAFRVGY 283
+ A LPP+ P +++VPFT MQ+AVSKNM+ESL+VP FRVGY
Sbjct: 229 SKSSIAPPPPPPPPVTAKATTTNLPPLLPDSSIVPFTAMQSAVSKNMIESLSVPTFRVGY 288
Query: 284 PIVTDKLDELYEKVKSKGVTMTVXXXXXXXXXXXQHPVVNASCRDGKSFTYNTNINIAVA 343
P+ TD LD LYEKVK KGVTMT QHPVVNASC+DGKSF+YN++INIAVA
Sbjct: 289 PVNTDALDALYEKVKPKGVTMTALLAKAAGMALAQHPVVNASCKDGKSFSYNSSINIAVA 348
Query: 344 VAIDGGLITPVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGMFGVD 403
VAI+GGLITPVL+DADKLD+YLLSQKWKELV KAR+KQLQP+EY+SGTFTLSNLGMFGVD
Sbjct: 349 VAINGGLITPVLQDADKLDLYLLSQKWKELVGKARSKQLQPHEYNSGTFTLSNLGMFGVD 408
Query: 404 RFDAILPPGQGGIMAVGASKPTVVADKDGFFSVKSKMLVNVTADHRIVYGADLAAFLQTF 463
RFDAILPPGQG IMAVGASKPTVVADKDGFFSVK+ MLVNVTADHRIVYGADLAAFLQTF
Sbjct: 409 RFDAILPPGQGAIMAVGASKPTVVADKDGFFSVKNTMLVNVTADHRIVYGADLAAFLQTF 468
Query: 464 AKIIEDPESLTL 475
AKIIE+P+SLTL
Sbjct: 469 AKIIENPDSLTL 480
>AT1G34430.1 | chr1:12588027-12590084 REVERSE LENGTH=466
Length = 465
Score = 367 bits (941), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/302 (62%), Positives = 220/302 (72%), Gaps = 16/302 (5%)
Query: 174 GTKGIATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIEXXXXXXXXXXXXXXX 233
G + +A+P AKKLAK+ +V+LA + G+GP GRI DVEA A
Sbjct: 180 GKRIVASPYAKKLAKELKVELAGLVGSGPMGRIVAKDVEAVAA----------------G 223
Query: 234 XXXXXIGAVPQAAELPPVPGATVVPFTGMQAAVSKNMVESLAVPAFRVGYPIVTDKLDEL 293
AV + P V +VVPFT MQ AVS+NMVESL VP FRVGY I TD LD L
Sbjct: 224 GGVQAAVAVKEVVAAPGVELGSVVPFTTMQGAVSRNMVESLGVPTFRVGYTISTDALDAL 283
Query: 294 YEKVKSKGVTMTVXXXXXXXXXXXQHPVVNASCRDGKSFTYNTNINIAVAVAIDGGLITP 353
Y+K+KSKGVTMT +HPVVN+SCRDG SF YN++IN+AVAVAIDGGLITP
Sbjct: 284 YKKIKSKGVTMTALLAKATALALAKHPVVNSSCRDGNSFVYNSSINVAVAVAIDGGLITP 343
Query: 354 VLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGMFGVDRFDAILPPGQ 413
VL++ADK+DIY LS+KWKELV KARAKQLQP EY++GTFTLSNLGMFGVDRFDAILPPG
Sbjct: 344 VLQNADKVDIYSLSRKWKELVDKARAKQLQPQEYNTGTFTLSNLGMFGVDRFDAILPPGT 403
Query: 414 GGIMAVGASKPTVVADKDGFFSVKSKMLVNVTADHRIVYGADLAAFLQTFAKIIEDPESL 473
G IMAVGAS+P+VVA KDG +K++M VNVTADHR++YGADLA FLQT A IIEDP+ L
Sbjct: 404 GAIMAVGASQPSVVATKDGRIGMKNQMQVNVTADHRVIYGADLAQFLQTLASIIEDPKDL 463
Query: 474 TL 475
T
Sbjct: 464 TF 465
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 61/83 (73%), Positives = 74/83 (89%)
Query: 45 KIREIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVL 104
KIREIFMPALSSTMTEGKIVSW +EGD++ KG++VVVVESDKADMDVETF+DG +AA++
Sbjct: 38 KIREIFMPALSSTMTEGKIVSWVKSEGDKLNKGESVVVVESDKADMDVETFYDGYLAAIM 97
Query: 105 VPAGESAPVGAPIALLAESEDDL 127
V G APVG+ IALLAE+ED++
Sbjct: 98 VEEGGVAPVGSAIALLAETEDEI 120
>AT1G54220.1 | chr1:20246460-20250208 REVERSE LENGTH=540
Length = 539
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 217/454 (47%), Gaps = 51/454 (11%)
Query: 47 REIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVP 106
+EI MP+LS TMTEG I W EGD+VA G+ + VE+DKA +++E +G +A ++
Sbjct: 112 QEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYLAKIVKA 171
Query: 107 AG-ESAPVGAPIALLAESEDDL------------QAALAKAQELSKAHPQQXXXXXXXXX 153
G + VG IA+ E E+D+ AA KA E + A P++
Sbjct: 172 EGSKEIQVGEVIAITVEDEEDIGKFKDYTPSSTADAAPTKA-EPTPAPPKEEKVKQPSSP 230
Query: 154 XXXXXXXXXXXXXXXXXXXXGTKGIATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVE- 212
G + A+P A+KLA+ + V L+ + GTGP GRI AD++
Sbjct: 231 PEPKASKPSTPPT-------GDRVFASPLARKLAEDNNVPLSDIEGTGPEGRIVKADIDE 283
Query: 213 --AAAGIEXXXXXXXXXXXXXXXXXXXXIGAVPQAAELPPVPGATVVPFTGMQAAVSKNM 270
A++G + A + +P + + T + A SK
Sbjct: 284 YLASSG------------KGATAKPSKSTDSKAPALDYVDIPHSQIRKVTASRLAFSKQ- 330
Query: 271 VESLAVPAFRVGYPIVTDKLDELYEKVKS-------KGVTMTVXXXXXXXXXXXQHPVVN 323
+P + + DKL L ++ S K +++ + P N
Sbjct: 331 ----TIPHYYLTVDTCVDKLMALRSQLNSFKEASGGKRISVNDLVVKAAALALRKVPQCN 386
Query: 324 ASCRDGKSFTYNTNINIAVAVAIDGGLITPVLEDADKLDIYLLSQKWKELVKKARAKQLQ 383
+S D + N+NI VAV + GL PV++DAD+ + + ++ + L +KA+ L+
Sbjct: 387 SSWTDDYIRQFK-NVNINVAVQTENGLYVPVVKDADRKGLSTIGEEVRLLAQKAKENSLK 445
Query: 384 PNEYSSGTFTLSNL-GMFGVDRFDAILPPGQGGIMAVGASKPTVV-ADKDGFFSVKSKML 441
P +Y GTFT+SNL G FG+ +F A++ P Q I+AVG+++ VV + F+ S M
Sbjct: 446 PEDYEGGTFTVSNLGGPFGIKQFCAVVNPPQAAILAVGSAEKRVVPGNGPDQFNFASYMP 505
Query: 442 VNVTADHRIVYGADLAAFLQTFAKIIEDPESLTL 475
V ++ DHR+V GA A +L+ F IE+P+S+ L
Sbjct: 506 VTLSCDHRVVDGAIGAEWLKAFKGYIENPKSMLL 539
>AT3G52200.2 | chr3:19360317-19366091 FORWARD LENGTH=714
Length = 713
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 204/436 (46%), Gaps = 26/436 (5%)
Query: 51 MPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVPAG-E 109
MPALS TM +G I W EGD++ GD + +E+DKA ++ E+ +G +A +L+P G +
Sbjct: 293 MPALSPTMNQGNIAKWWKKEGDKIEVGDVIGEIETDKATLEFESLEEGYLAKILIPEGSK 352
Query: 110 SAPVGAPIALLAESEDDLQAALAKAQELSKAHPQQXXXXXXXXXXXXXXXXXXXXXXXXX 169
VG PIAL+ E + ++A + + S+
Sbjct: 353 DVAVGKPIALIVEDAESIEAIKSSSAGSSEVD--------------TVKEVPDSVVDKPT 398
Query: 170 XXXXGTKGIATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIEXXXXXXXXXXX 229
G I +P AK L +H ++ + + +GP+G + +DV AA
Sbjct: 399 ERKAGFTKI-SPAAKLLILEHGLEASSIEASGPYGTLLKSDVVAAIASGKASKSSASTKK 457
Query: 230 XXXXXXXXXIGAVPQAAELPPVPGATV-VPFTGMQAAVSKNMVES-LAVPAFRVGYPIVT 287
+ + P + ++ ++K ++ES +P + +V
Sbjct: 458 KQPSKETPSKSSSTSKPSVTQSDNNYEDFPNSQIRKIIAKRLLESKQKIPHLYLQSDVVL 517
Query: 288 DKLDELYEKVK-SKGVTMTVXXXXXXXXXXXQHPVVNASC---RDGKSFTYNTNINIAVA 343
D L ++++ + GV ++V V A+ + +++I++A
Sbjct: 518 DPLLAFRKELQENHGVKVSVNDIVIKAVAVALRNVRQANAFWDAEKGDIVMCDSVDISIA 577
Query: 344 VAIDGGLITPVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGMFGVD 403
VA + GL+TP++++AD+ I +S + KEL +KAR+ +L P+E+ GTF++SNLGM+ VD
Sbjct: 578 VATEKGLMTPIIKNADQKSISAISLEVKELAQKARSGKLAPHEFQGGTFSISNLGMYPVD 637
Query: 404 RFDAILPPGQGGIMAVGASKPTV--VADKDGFF--SVKSKMLVNVTADHRIVYGADLAAF 459
F AI+ P Q GI+AVG V V DG SV +KM V ++ADHRI G A+F
Sbjct: 638 NFCAIINPPQAGILAVGRGNKVVEPVIGLDGIEKPSVVTKMNVTLSADHRIFDGQVGASF 697
Query: 460 LQTFAKIIEDPESLTL 475
+ ED L L
Sbjct: 698 MSELRSNFEDVRRLLL 713
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 51 MPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVPAG-E 109
MPALS TM+ G +V W EGD+V GD + +E+DKA ++ E+ +G +A +LV G +
Sbjct: 166 MPALSPTMSHGNVVKWMKKEGDKVEVGDVLCEIETDKATVEFESQEEGFLAKILVTEGSK 225
Query: 110 SAPVGAPIALLAESEDDLQ 128
PV PIA++ E EDD++
Sbjct: 226 DIPVNEPIAIMVEEEDDIK 244
>AT3G13930.1 | chr3:4596240-4600143 FORWARD LENGTH=540
Length = 539
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 28/309 (9%)
Query: 178 IATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVE--AAAGIEXXXXXXXXXXXXXXXXX 235
A+P A+KLA+ + V L+ + GTGP GRI ADVE A+G +
Sbjct: 248 FASPLARKLAEDNNVPLSSIKGTGPEGRIVKADVEDFLASGSKETTAKPSKQVD------ 301
Query: 236 XXXIGAVPQAAELPPVPGATVVPFTGMQAAVSKNMVESLAVPAFRVGYPIVTDKLDELYE 295
VP A + +P + T + A SK +P + + DK+ L
Sbjct: 302 ----SKVP-ALDYVDIPHTQIRKVTASRLAFSKQ-----TIPHYYLTVDTCVDKMMGLRS 351
Query: 296 KVKS-------KGVTMTVXXXXXXXXXXXQHPVVNASCRDGKSFTYNTNINIAVAVAIDG 348
++ S K +++ + P N+S D + N+NI VAV +
Sbjct: 352 QLNSFQEASGGKRISVNDLVIKAAALALRKVPQCNSSWTDEYIRQFK-NVNINVAVQTEN 410
Query: 349 GLITPVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGM-FGVDRFDA 407
GL PV++DADK + + ++ + L +KA+ L+P +Y GTFT+SNLG FG+ +F A
Sbjct: 411 GLYVPVVKDADKKGLSTIGEEVRFLAQKAKENSLKPEDYEGGTFTVSNLGGPFGIKQFCA 470
Query: 408 ILPPGQGGIMAVGASKPTVV-ADKDGFFSVKSKMLVNVTADHRIVYGADLAAFLQTFAKI 466
++ P Q I+A+G+++ VV ++V S M V ++ DHR++ GA A +L+ F
Sbjct: 471 VINPPQAAILAIGSAEKRVVPGTGPDQYNVASYMSVTLSCDHRVIDGAIGAEWLKAFKGY 530
Query: 467 IEDPESLTL 475
IE PES+ L
Sbjct: 531 IETPESMLL 539
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 47 REIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVP 106
+EI MP+LS TMTEG I W EGD+VA G+ + VE+DKA +++E +G +A ++
Sbjct: 112 QEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFLAKIVKE 171
Query: 107 AG-ESAPVGAPIALLAESEDDLQ 128
G + VG IA+ E EDD+Q
Sbjct: 172 EGAKEIQVGEVIAITVEDEDDIQ 194
>AT3G06850.1 | chr3:2158212-2160465 REVERSE LENGTH=484
Length = 483
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 176/432 (40%), Gaps = 52/432 (12%)
Query: 58 MTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVPAGESAPVGAPI 117
+ E +++ W EGD V + + V+SDKA +++ + G VA + G+ VG +
Sbjct: 87 IAECELLKWFVKEGDSVEEFQPLCEVQSDKATIEITSRFKGKVALISHSPGDIIKVGETL 146
Query: 118 ALLA--ESEDDLQAALAKAQELSKAHPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGT 175
LA +S+D L ++ ++ +Q GT
Sbjct: 147 VRLAVEDSQDSLLTT-DSSEIVTLGGSKQ-----------------------------GT 176
Query: 176 KGI----ATPQAKKLAKQHRVDLAKVAGTGPFGRITPADVEAAAGIEXXXXXXXXXXXXX 231
+ + +TP + LAK +D+ + GTG GR+ DV
Sbjct: 177 ENLLGALSTPAVRNLAKDLGIDINVITGTGKDGRVLKEDV-------LRFSDQKGFVTDS 229
Query: 232 XXXXXXXIGAVPQAAELPPVPGATVVPFTGMQAAVSKNMVESLAVPAFRVGYPIVTDKLD 291
IG + + VP G A+ K M + +VP F I D L
Sbjct: 230 VSSEHAVIGGDSVSTKASSNFEDKTVPLRGFSRAMVKTMTMATSVPHFHFVEEINCDSLV 289
Query: 292 ELYEKVKSKGVTMTVXXX------XXXXXXXXQHPVVNASCRDGKSF--TYNTNINIAVA 343
EL + K T+ ++P VN SC + +S + NI VA
Sbjct: 290 ELKQFFKENNTDSTIKHTFLPTLIKSLSMALTKYPFVN-SCFNAESLEIILKGSHNIGVA 348
Query: 344 VAIDGGLITPVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGMFGVD 403
+A + GL+ P +++ L + ++++ L A +L P + + GT TLSN+G G
Sbjct: 349 MATEHGLVVPNIKNVQSLSLLEITKELSRLQHLAANNKLNPEDVTGGTITLSNIGAIGGK 408
Query: 404 RFDAILPPGQGGIMAVGASKPTVVADKDGFFSVKSKMLVNVTADHRIVYGADLAAFLQTF 463
+L + I+A+G + K+G S M+VN+ ADHR++ GA +A F +
Sbjct: 409 FGSPLLNLPEVAIIALGRIEKVPKFSKEGTVYPASIMMVNIAADHRVLDGATVARFCCQW 468
Query: 464 AKIIEDPESLTL 475
+ +E PE L L
Sbjct: 469 KEYVEKPELLML 480
>AT4G26910.1 | chr4:13520127-13522889 REVERSE LENGTH=465
Length = 464
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 112/242 (46%), Gaps = 20/242 (8%)
Query: 247 ELPPVPGATVVPFTGMQAAVSKNMVESLAVPAFRVGYPIV---------TDKLDELYEKV 297
+LPP VP T ++ V+ + +S A + V + D YEK
Sbjct: 228 QLPPKERERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSQYKDAFYEK- 286
Query: 298 KSKGVTMTVXX-XXXXXXXXXQH-PVVNASCRDGKSFTYNTNINIAVAVAIDGGLITPVL 355
GV + + QH PVVNA DG Y ++I++AV GL+ PV+
Sbjct: 287 --HGVKLGLMSGFIKAAVSALQHQPVVNAVI-DGDDIIYRDYVDISIAVGTSKGLVVPVI 343
Query: 356 EDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGMFGVDRFDAILPPGQGG 415
ADK++ + + L KKA + +E + G+FT+SN G++G I+ P Q
Sbjct: 344 RGADKMNFAEIEKTINSLAKKANEGTISIDEMAGGSFTVSNGGVYGSLISTPIINPPQSA 403
Query: 416 IMAVGA--SKPTVVADKDGFFSVKSKMLVNVTADHRIVYGADLAAFLQTFAKIIEDPESL 473
I+ + + S+P VV G + M V +T DHR++ G + FL+ ++EDP+ L
Sbjct: 404 ILGMHSIVSRPMVVG---GSVVPRPMMYVALTYDHRLIDGREAVYFLRRVKDVVEDPQRL 460
Query: 474 TL 475
L
Sbjct: 461 LL 462
>AT5G55070.1 | chr5:22347637-22350409 FORWARD LENGTH=465
Length = 464
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 115/239 (48%), Gaps = 14/239 (5%)
Query: 247 ELPPVPGATVVPFTGMQAAVSKNMVESLAVPAFRVGYPIV--TD--KLDELYEK--VKSK 300
+LPP VP T ++ V+ + +S A + V T+ KL Y+ ++
Sbjct: 228 QLPPKDRERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSQYKDAFLEKH 287
Query: 301 GVTMTVXX-XXXXXXXXXQH-PVVNASCRDGKSFTYNTNINIAVAVAIDGGLITPVLEDA 358
GV + + QH PVVNA DG Y ++I++AV GL+ PV+ DA
Sbjct: 288 GVKLGLMSGFIKAAVSALQHQPVVNAVI-DGDDIIYRDYVDISIAVGTSKGLVVPVIRDA 346
Query: 359 DKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGMFGVDRFDAILPPGQGGIMA 418
DK++ + + L KKA + +E + G+FT+SN G++G I+ P Q I+
Sbjct: 347 DKMNFADIEKTINGLAKKATEGTISIDEMAGGSFTVSNGGVYGSLISTPIINPPQSAILG 406
Query: 419 VGA--SKPTVVADKDGFFSVKSKMLVNVTADHRIVYGADLAAFLQTFAKIIEDPESLTL 475
+ + +P VV G + M V +T DHR++ G + FL+ ++EDP+ L L
Sbjct: 407 MHSIVQRPMVVG---GSVVPRPMMYVALTYDHRLIDGREAVYFLRRIKDVVEDPQRLLL 462
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.130 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,659,903
Number of extensions: 263380
Number of successful extensions: 526
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 511
Number of HSP's successfully gapped: 14
Length of query: 475
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 373
Effective length of database: 8,310,137
Effective search space: 3099681101
Effective search space used: 3099681101
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 114 (48.5 bits)