BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0406600 Os08g0406600|AK064130
(401 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G39760.1 | chr2:16583213-16585983 FORWARD LENGTH=409 238 5e-63
AT3G06190.1 | chr3:1874577-1876575 REVERSE LENGTH=407 218 5e-57
AT5G19000.2 | chr5:6342563-6344641 FORWARD LENGTH=443 205 3e-53
AT3G03740.1 | chr3:937106-939807 REVERSE LENGTH=466 197 9e-51
AT5G21010.1 | chr5:7136062-7138374 FORWARD LENGTH=411 194 5e-50
AT3G43700.1 | chr3:15601944-15603499 FORWARD LENGTH=416 189 3e-48
AT3G22080.1 | chr3:7777818-7781718 REVERSE LENGTH=649 53 2e-07
AT4G00780.1 | chr4:334779-336120 FORWARD LENGTH=300 52 5e-07
>AT2G39760.1 | chr2:16583213-16585983 FORWARD LENGTH=409
Length = 408
Score = 238 bits (607), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 143/366 (39%), Positives = 197/366 (53%), Gaps = 35/366 (9%)
Query: 36 ELVRGSHEFTVAGYSLQKRKGAGHSIRSGSFEVGGYSWAIRFYPAGSTKEEER-HVSVYL 94
E V GSH+FT+ GYSL K G I+S F VGGY WAI FYP G E++ ++S+++
Sbjct: 21 ETVNGSHQFTIQGYSLAKGMSPGKFIQSDIFSVGGYDWAIYFYPDGKNPEDQSSYISLFI 80
Query: 95 ELRSTVVEKVTARFSFHVHGASASSLH-MRGSFD------DYTPTSKS--WGYPKFMEIE 145
L S + A F + S H + FD YT K WGY +F +
Sbjct: 81 ALASDS-NDIRALFELTLMDQSGKGKHKVHSHFDRALEGGPYTLKYKGSMWGYKRFFKRS 139
Query: 146 TVE-SEYLINDCLTLLCDVEVVKTVKTGATISCFITVPPPAICRDLELLVGSKEGSDVTL 204
+E S+YL +DCL + C V VV+ G I +P + + L+ L+ S+ G D+
Sbjct: 140 ALETSDYLKDDCLVINCTVGVVRARLEGPK-QYGIVLPLSNMGQGLKDLLDSEVGCDIAF 198
Query: 205 QLEQSEYDAHRAVLAARSPVFSAQFFGPMADEDAAAAGSRRNVRIHDIKPAVFEAVLHFV 264
Q+ Y AH+ +LAARSPVF AQFFGP+ + + + I DI+P++F+A+L F+
Sbjct: 199 QVGDETYKAHKLILAARSPVFRAQFFGPIGNNNV------DRIVIDDIEPSIFKAMLSFI 252
Query: 265 YTDTLPPATTSWSASHRDKRPKLSDVAAASCSEEEVRVMIGERLAAADRFDLERMRLLCE 324
YTD LP H S S MI LAAAD +DL R+++LCE
Sbjct: 253 YTDVLPNV-------HE---------ITGSTSASSFTNMIQHLLAAADLYDLARLKILCE 296
Query: 325 DALWETIDVANAAATLRLADRHHCPQLKELCMEYIASAGVLAAVMTTEGFRELKLDCPSL 384
L E +DV N A TL LA++H QLK C+E++AS L AVM +EGF+ LK CP+L
Sbjct: 297 VLLCEKLDVDNVATTLALAEQHQFLQLKAFCLEFVASPANLGAVMKSEGFKHLKQSCPTL 356
Query: 385 LIEILE 390
L E+L
Sbjct: 357 LSELLN 362
>AT3G06190.1 | chr3:1874577-1876575 REVERSE LENGTH=407
Length = 406
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 207/384 (53%), Gaps = 55/384 (14%)
Query: 35 TELVRGSHEFTVAGYSLQKRKGAGHSIRSGSFEVGGYSWAIRFYPAGSTKEEER-HVSVY 93
TE + GSHEF ++GYSL K G G + S +F VGGYSWAI FYP G + E+ +VS++
Sbjct: 28 TETINGSHEFKISGYSLVKGMGIGKYVASDTFMVGGYSWAIYFYPDGKSPEDNSVYVSLF 87
Query: 94 LELRS-----------TVVEKV-TARFSFHVH-----GASASSLHMRGSFDDYTPTSKSW 136
+ L S T+V++ R H H + +L RGS W
Sbjct: 88 IALASEGADVRALFELTLVDQSGNERHKVHSHFGRTLESGPYTLKYRGSM---------W 138
Query: 137 GYPKFMEIETVES-EYLINDCLTLLCDVEVVKTVKTGATISCF-ITVPPPAICRDLELLV 194
GY +F + +ES +YL ++ L + C V VVK+ G C+ I VP + + L+
Sbjct: 139 GYKRFFKRSLLESSDYLKDNGLLVRCCVGVVKSRTEGP--RCYNIPVPVSGLGQQFGKLL 196
Query: 195 GSKEGSDVTLQLEQSEYDAHRAVLAARSPVFSAQFFGPMADEDAAAAGSRRNVRIHDIKP 254
S +G+DVT +++ + AH+ VLAARS VF AQ FGP+ E+ + I D++
Sbjct: 197 ESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLRSENTNC------IIIEDVQA 250
Query: 255 AVFEAVLHFVYTDTLPPATTSWSASHRDKRPKL-SDVAAASCSEEEVRVMIGERLAAADR 313
+F+ +LHF+Y D +P D + + +D+ AS ++ LAAADR
Sbjct: 251 PIFKMLLHFIYWDEMP-----------DMQDLIGTDLKWAST------LVAQHLLAAADR 293
Query: 314 FDLERMRLLCEDALWETIDVANAAATLRLADRHHCPQLKELCMEYIASAGVLAAVMTTEG 373
+ LER+R +CE L E I + A TL LA++HHC QLK C+++IA L AVM T+G
Sbjct: 294 YALERLRTICESKLCEGISINTVATTLALAEQHHCFQLKAACLKFIALPENLKAVMETDG 353
Query: 374 FRELKLDCPSLLIEILENFGKRSE 397
F LK CPSLL E+LE + SE
Sbjct: 354 FDYLKESCPSLLSELLEYVARLSE 377
>AT5G19000.2 | chr5:6342563-6344641 FORWARD LENGTH=443
Length = 442
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 203/399 (50%), Gaps = 56/399 (14%)
Query: 38 VRGSHEFTVAGYSLQKRKGAGHSIRSGSFEVGGYSWAIRFYPAGSTKEEE-RHVSVYLEL 96
V G HEF + GYSL K G G + S +F VGGYSWAI FYP G + E+ +VS+++ L
Sbjct: 32 VNGFHEFKICGYSLAKGVGVGKYVASDTFMVGGYSWAIYFYPDGKSPEDNSSYVSLFIAL 91
Query: 97 RS-----------TVVEKV-TARFSFHVHGASA-----SSLHMRGSFDDYTPTSKSWGYP 139
S T+V++ + H H A +L RGS WGY
Sbjct: 92 ASEGADVRALFELTLVDQSGNGKHKVHSHFGRALDSGPYTLKYRGSM---------WGYK 142
Query: 140 KFMEIETVE-SEYLINDCLTLLCDVEVVKTVKTGATISCFITVPPPAICRDLELLVGSKE 198
+F ++E S+YL + L + C V VVK+V G I VP + + L L+ S +
Sbjct: 143 RFFRRSSLESSDYLKENSLLVRCRVGVVKSVTEGPRYYN-IPVPVSNLGQQLGNLLESGK 201
Query: 199 GSDVTLQLEQSEYDAHRAVLAARSPVFSAQFFGPMADEDAAAAGSRRNVRIHDIKPAVFE 258
G DV Q++ ++AH+ VLA RSPVF+AQ FGP+ D + + + I D++ +F+
Sbjct: 202 GCDVVFQVDGETFNAHKLVLATRSPVFNAQLFGPLGDRNT------KCITIEDMEAPIFK 255
Query: 259 A----VLHFVYTDTLPPATTSW------SASHRDK----------RPKLSDVAAASCSEE 298
+L VY+ P ++ S RDK P + ++ +
Sbjct: 256 VLPLTLLLIVYSRMYHPGSSPGALLLFSSLLTRDKVLLHFIYWDELPDMQELIGTDSTLA 315
Query: 299 EVRVMIGERLAAADRFDLERMRLLCEDALWETIDVANAAATLRLADRHHCPQLKELCMEY 358
V LAAADR+ LER++ +CE L E + + A TL LA++HHC QLK +C+++
Sbjct: 316 STLVA-QHLLAAADRYALERLKAICESKLCEGVAINTVATTLALAEQHHCLQLKAVCLKF 374
Query: 359 IASAGVLAAVMTTEGFRELKLDCPSLLIEILENFGKRSE 397
+A L AVM T+GF LK CPSLL E+L+ + SE
Sbjct: 375 VALPENLKAVMQTDGFDYLKESCPSLLTELLQYVARLSE 413
>AT3G03740.1 | chr3:937106-939807 REVERSE LENGTH=466
Length = 465
Score = 197 bits (501), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 194/371 (52%), Gaps = 42/371 (11%)
Query: 35 TELVRGSHEFTVAGYSLQKRKGAGHSIRSGSFEVGGYSWAIRFYPAGSTKEEER-HVSVY 93
T+ + GSH FT+ GYSL K G G I S +F VGGY WAI FYP G E+ +VSV+
Sbjct: 42 TQTINGSHSFTIKGYSLAKGIGIGKHIASDTFTVGGYQWAIYFYPDGKNPEDNSAYVSVF 101
Query: 94 LELRSTVVEKVTARFSFHVHGASASSLH-MRGSFD------DYTPTSKS--WGYPKFMEI 144
+ L S + V A F + S H + FD YT + WGY +F
Sbjct: 102 IALASDGTD-VRALFELSLLDQSGKGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFRR 160
Query: 145 ETVE-SEYLINDCLTLLCDVEVVKTVKTGATISC----FITVPPPAICRDLELLVGSKEG 199
+E S++L +DCL + C V VV + I C I VP I +L+ +++G
Sbjct: 161 LMLETSDFLKDDCLKINCTVGVVVS-----EIDCPRLHSIHVPASDIGSHFGMLLENEDG 215
Query: 200 SDVTLQLEQSEYDAHRAVLAARSPVFSAQFFGPMADEDAAAAGSRRNVRIHDIKPAVFEA 259
SD+T + ++ AHR VLAARSPVF ++F +ED R++ + D++P VF+A
Sbjct: 216 SDITFNVSGEKFRAHRLVLAARSPVFESEFLDVTGEED-------RDIEVTDMEPKVFKA 268
Query: 260 VLHFVYTDTLPPATTSWSASHRDKRPKLSDVAAASCSEEEVRVMIGERLAAADRFDLERM 319
+LH++Y D L S S+S P SD AA L AAD++ L R+
Sbjct: 269 LLHYIYKDALIEDAESSSSSGSSVGPSASDTLAAKL------------LGAADKYKLPRL 316
Query: 320 RLLCEDALWETIDVANAAATLRLADRHHCPQLKELCMEYIASAGVLAAVMTTEGFRELKL 379
L+CE L + I V + A L LADR++ LK +C+++ A L AVM ++GF L+
Sbjct: 317 SLMCESVLCKDISVDSVANILALADRYNASALKSVCLKFAAEN--LIAVMRSDGFDYLRE 374
Query: 380 DCPSLLIEILE 390
CPSL E+L+
Sbjct: 375 HCPSLQSELLK 385
>AT5G21010.1 | chr5:7136062-7138374 FORWARD LENGTH=411
Length = 410
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 199/375 (53%), Gaps = 48/375 (12%)
Query: 35 TELVRGSHEFTVAGYSLQKRKGAGHSIRSGSFEVGGYSWAIRFYPAGSTKEEE-RHVSVY 93
T+ V GSH+F + GYSL K G G I S +F VGGY W I FYP G E+ +VSV+
Sbjct: 24 TQTVNGSHQFVIQGYSLAKGMGIGKHIASDNFSVGGYQWGIFFYPDGKNPEDNSSYVSVF 83
Query: 94 LELRSTVVEKVTARFSFHV-----HGASASSLHMRGSFDDYTPTSK----SWGYPKFMEI 144
+ L S E V A F + G H S D T K WGY +F
Sbjct: 84 IALASEGTE-VRALFELALVDQSGKGKHKVHSHFERSLDGGPYTLKYRGSMWGYKRFFRR 142
Query: 145 ETVE-SEYLINDCLTLLCDVEVVKTVKTGATISC----FITVPPPAICRDLELLVGSKEG 199
+E S+YL +DCL + C V VV + I C + VP + +L+ S EG
Sbjct: 143 SILETSDYLKDDCLIINCTVGVVVS-----EILCPQLHSVHVPDSELGSHFGVLLDSMEG 197
Query: 200 SDVTLQLEQSEYDAHRAVLAARSPVFSAQFFGPMADEDAAAAGSRRNVRIHDIKPAVFEA 259
SD+T + ++ AH+ VLAARSP F ++ + + V I+D++P VF+A
Sbjct: 198 SDITFNIAGEKFLAHKLVLAARSPFFKSK-------FFSEFEANNTEVTINDLEPKVFKA 250
Query: 260 VLHFVYTDTLP----PATTSWSASHRDKRPKLSDVAAASCSEEEVRVMIGERLAAADRFD 315
+L F+Y D+LP PAT +H +R KLS++ +I + LAAAD++D
Sbjct: 251 LLQFMYKDSLPEDVEPAT-----AHTFERLKLSEI---------YETLIVKVLAAADKYD 296
Query: 316 LERMRLLCEDALWETIDVANAAATLRLADRHHCPQLKELCMEYIASAGVLAAVMTTEGFR 375
L R+RLLCE + + + V + A L LADR++ +LK +C+++ A LAAV+ T+ ++
Sbjct: 297 LIRLRLLCESHICKGVSVKSVAKILALADRYNAKELKGVCLKFTAEN--LAAVLETDAYQ 354
Query: 376 ELKLDCPSLLIEILE 390
++K +C +L E+L+
Sbjct: 355 QMKDECVTLQSELLK 369
>AT3G43700.1 | chr3:15601944-15603499 FORWARD LENGTH=416
Length = 415
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/368 (34%), Positives = 192/368 (52%), Gaps = 34/368 (9%)
Query: 35 TELVRGSHEFTVAGYSLQKRKGAGHSIRSGSFEVGGYSWAIRFYPAGSTKEEE-RHVSVY 93
T+ GSH+F + GYSL K G G I S +F VGGY W I YP G E+ +VSV+
Sbjct: 31 TQTTNGSHQFVIQGYSLAKGIGVGKHIASDNFSVGGYQWTIFVYPDGKNPEDNSSYVSVF 90
Query: 94 LELRSTVVEKVTARFSFHV-----HGASASSLHMRGSFDDYTPTSK----SWGYPKFMEI 144
+ L S E V A F + G H S D T K WGY +F
Sbjct: 91 IVLASECTE-VRALFELSLVDQSGKGKHKVHSHFNRSLDGGPYTLKYRGSMWGYKRFFRR 149
Query: 145 ETVE-SEYLINDCLTLLCDVEVVKTVKTGATISCFITVPPPAICRDLELLVGSKEGSDVT 203
+E S+YL +DCL + C V VV + + I VP + L+ + +GSDVT
Sbjct: 150 SLLETSDYLKDDCLKINCTVGVVVSEMHCPRL-LSIHVPDSELGSHFGKLLDTLQGSDVT 208
Query: 204 LQLEQSEYDAHRAVLAARSPVFSAQFFGPMADEDAAAAGSRRNVRIHDIKPAVFEAVLHF 263
+ ++ AH+ VLAARS F + F+ +A+ ++ +V I D++P VF+A+LHF
Sbjct: 209 FDVAGEKFQAHKLVLAARSQFFRSMFYNTLAENNS-------DVVISDLEPKVFKALLHF 261
Query: 264 VYTDTLPPATTSWSASHRD-KRPKLSDVAAASCSEEEVRVMIGERLAAADRFDLERMRLL 322
+Y D+LP +A D RP D +I + LAAA+ ++L R+RLL
Sbjct: 262 MYKDSLPGDVEPLTAHSFDLLRPSEID-----------DTLIVKLLAAAEMYNLSRLRLL 310
Query: 323 CEDALWETIDVANAAATLRLADRHHCPQLKELCMEYIASAGVLAAVMTTEGFRELKLDCP 382
CE + + I +++ + L L+D+++ +LK + +++ A LAAV+ T+ + +LK DCP
Sbjct: 311 CESHICKGISISSVSKILALSDKYNASELKSVSLKFTAEN--LAAVLQTKAYEDLKDDCP 368
Query: 383 SLLIEILE 390
+L E+L+
Sbjct: 369 NLQSELLK 376
>AT3G22080.1 | chr3:7777818-7781718 REVERSE LENGTH=649
Length = 648
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 63 SGSFEVGGYSWAIRFYPAGSTKEEERHVSVYLELRSTVV----EKVTARFSFHVHGASAS 118
SG+F + W ++ YP G K + + +S+YL L + EK+ + V S
Sbjct: 531 SGNFSMRERKWVLKLYPKGDVKGDRKWLSLYLYLDQSETLKESEKIFVQAQLRVLDPRGS 590
Query: 119 S--LHMRGSFDDYTPTSKSWGYPKFMEIETVESEYLINDCLTLLCDVEVV 166
+ H S+ YT ++ +WGY KF+ + + YL D L + DVEVV
Sbjct: 591 NHVTHKISSW--YTSSNTAWGYRKFVSLAEIPKAYLDKDTLKVQIDVEVV 638
>AT4G00780.1 | chr4:334779-336120 FORWARD LENGTH=300
Length = 299
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 4/145 (2%)
Query: 41 SHEFTVAGYSLQKRKGAGHSIRSGSFEVGGYSWAIRFYPAGSTKEEERHVSVYLELRSTV 100
SH F + +SL K+ G + S F++ G+ W + YP G + HVS++L + V
Sbjct: 21 SHLFKIDNFSLLKKHGI-EKVESSVFDLAGHKWKLSVYPNGHKNAKGTHVSMFLVNQVPV 79
Query: 101 VEKVTARFSFHVHGASASSLHMRGSFDDYTPTSKSWGYPKFMEIETVESE-YLINDCLTL 159
+ T H R F D P S G+ +F+ + +E + +LI DC
Sbjct: 80 NDMPTYELLVVSQLERKWHTHGRDEF-DINPEPASEGFLRFISLADLERKGFLIGDCCMF 138
Query: 160 LCDVEVVKTVKTGATISCFITVPPP 184
++ G T CF + P
Sbjct: 139 GVKFHGIEPANPG-TAECFSLIEKP 162
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,064,079
Number of extensions: 316357
Number of successful extensions: 933
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 934
Number of HSP's successfully gapped: 9
Length of query: 401
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 300
Effective length of database: 8,337,553
Effective search space: 2501265900
Effective search space used: 2501265900
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)