BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0405700 Os08g0405700|AK108256
(205 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G28660.1 | chr2:12295419-12296944 FORWARD LENGTH=266 99 2e-21
AT2G37390.1 | chr2:15694300-15695461 FORWARD LENGTH=260 95 3e-20
AT5G02600.2 | chr5:584486-586855 REVERSE LENGTH=320 91 4e-19
AT3G24450.1 | chr3:8880286-8881611 REVERSE LENGTH=141 81 4e-16
AT3G53530.2 | chr3:19845199-19846583 FORWARD LENGTH=249 79 2e-15
AT3G56240.1 | chr3:20863460-20864402 REVERSE LENGTH=122 69 1e-12
AT1G66240.1 | chr1:24686445-24687327 REVERSE LENGTH=107 68 3e-12
AT3G05220.1 | chr3:1488808-1491171 FORWARD LENGTH=578 63 9e-11
AT5G27690.1 | chr5:9803796-9805036 FORWARD LENGTH=353 59 2e-09
AT3G06130.1 | chr3:1853048-1854673 REVERSE LENGTH=474 57 5e-09
AT5G37860.1 | chr5:15069578-15070555 REVERSE LENGTH=263 57 7e-09
AT5G19090.1 | chr5:6387910-6389855 FORWARD LENGTH=588 57 9e-09
AT1G56210.1 | chr1:21035715-21037019 FORWARD LENGTH=365 55 2e-08
AT5G05365.1 | chr5:1590125-1590672 FORWARD LENGTH=78 54 6e-08
AT1G71050.1 | chr1:26803322-26803946 REVERSE LENGTH=153 54 8e-08
AT1G22990.1 | chr1:8139221-8140045 FORWARD LENGTH=153 54 8e-08
AT5G03380.1 | chr5:832400-834301 REVERSE LENGTH=393 53 1e-07
AT1G23000.1 | chr1:8143614-8144865 FORWARD LENGTH=359 52 2e-07
AT4G38580.1 | chr4:18034596-18035693 FORWARD LENGTH=154 52 2e-07
AT4G08570.1 | chr4:5455123-5455975 REVERSE LENGTH=151 52 2e-07
AT3G56891.1 | chr3:21064199-21064922 REVERSE LENGTH=167 52 2e-07
AT1G06330.1 | chr1:1931671-1932266 REVERSE LENGTH=160 50 7e-07
AT4G35060.1 | chr4:16685874-16686419 REVERSE LENGTH=154 50 8e-07
AT5G66110.1 | chr5:26430245-26430778 FORWARD LENGTH=148 49 2e-06
AT5G60800.2 | chr5:24460822-24462464 REVERSE LENGTH=303 48 3e-06
AT4G10465.1 | chr4:6473582-6475137 FORWARD LENGTH=184 48 3e-06
AT2G18196.1 | chr2:7920793-7922268 REVERSE LENGTH=179 48 4e-06
AT5G50740.3 | chr5:20635983-20637970 REVERSE LENGTH=291 47 8e-06
AT5G17450.1 | chr5:5755386-5756743 FORWARD LENGTH=150 47 9e-06
>AT2G28660.1 | chr2:12295419-12296944 FORWARD LENGTH=266
Length = 265
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 58/64 (90%)
Query: 140 QVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKVKK 199
QVVV++V+IHC+GC GKVRKHISKMEGVTS++IDL +KKVTV+G ++P G++ESISKVK
Sbjct: 183 QVVVLRVSIHCKGCEGKVRKHISKMEGVTSYTIDLATKKVTVVGKITPVGLVESISKVKF 242
Query: 200 AELL 203
A+L
Sbjct: 243 AQLW 246
>AT2G37390.1 | chr2:15694300-15695461 FORWARD LENGTH=260
Length = 259
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 56/69 (81%)
Query: 135 GDQVLQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESI 194
GD QVVV+KV++HC+GC GKVRKH+++M+GVTSF+ID +KKVTV G ++P +L+SI
Sbjct: 176 GDTDQQVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSI 235
Query: 195 SKVKKAELL 203
SKVK A+
Sbjct: 236 SKVKNAQFW 244
>AT5G02600.2 | chr5:584486-586855 REVERSE LENGTH=320
Length = 319
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 54/64 (84%)
Query: 140 QVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKVKK 199
QVVV++V++HC+GCAGKV+KH+SK++GVTS++ID +KKVTV G V+P VL SISKVK
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 309
Query: 200 AELL 203
A+
Sbjct: 310 AQFW 313
>AT3G24450.1 | chr3:8880286-8881611 REVERSE LENGTH=141
Length = 140
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 140 QVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKVKK 199
++V +KV++HC GCA KV KHISK++GVT + ++LESKKV V G++ P VLESI KVK
Sbjct: 74 KIVELKVSMHCYGCAKKVEKHISKLDGVTWYKVELESKKVVVKGNILPVDVLESICKVKN 133
Query: 200 AELL 203
A+L
Sbjct: 134 AQLW 137
>AT3G53530.2 | chr3:19845199-19846583 FORWARD LENGTH=249
Length = 248
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 54/74 (72%), Gaps = 3/74 (4%)
Query: 133 SPGDQVLQVVVMKVAIHC--QGCAGKVRKHISKME-GVTSFSIDLESKKVTVMGHVSPAG 189
S G QVVV++V++HC +GC GKV+KH+SKM+ GVTSF+ID SKKVTV G ++P
Sbjct: 161 SSGSGSDQVVVLRVSLHCHCRGCQGKVKKHLSKMQVGVTSFNIDFASKKVTVTGDITPLE 220
Query: 190 VLESISKVKKAELL 203
VL +SKVK A+
Sbjct: 221 VLGCLSKVKNAQFW 234
>AT3G56240.1 | chr3:20863460-20864402 REVERSE LENGTH=122
Length = 121
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 140 QVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKVKK 199
Q VV+KV + CQGC G V + + KMEGV SF ID++ +KVTV G+V P V +++SK K
Sbjct: 3 QTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKTGK 62
>AT1G66240.1 | chr1:24686445-24687327 REVERSE LENGTH=107
Length = 106
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 45/60 (75%)
Query: 140 QVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKVKK 199
Q VV++VA+ C+GC G V++ + KMEGV SF +D++ +KVTV G+V P VL++++K K
Sbjct: 33 QTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGK 92
>AT3G05220.1 | chr3:1488808-1491171 FORWARD LENGTH=578
Length = 577
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 139 LQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKV- 197
LQ V+KV +HC+GC KV+K + K+EGV S D+E +VTV G++ PA +++ +SK
Sbjct: 9 LQTCVLKVNVHCEGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGNIDPALLVKKLSKSG 68
Query: 198 KKAELL 203
K AE+L
Sbjct: 69 KHAEIL 74
>AT5G27690.1 | chr5:9803796-9805036 FORWARD LENGTH=353
Length = 352
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 143 VMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKV-KKAE 201
V++V+IHC+GC K++K +SK++GV + +ID++ +KVTV+G+V P +++ I K + AE
Sbjct: 33 VLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAE 92
Query: 202 LL 203
L
Sbjct: 93 LW 94
>AT3G06130.1 | chr3:1853048-1854673 REVERSE LENGTH=474
Length = 473
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 139 LQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKV- 197
+Q V+KV IHC GC KV+K + K+EGV + ID E KVTV G V P+ +++ ++K
Sbjct: 9 IQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDPSVLIKKLAKSG 68
Query: 198 KKAELL 203
K AE+
Sbjct: 69 KHAEIW 74
>AT5G37860.1 | chr5:15069578-15070555 REVERSE LENGTH=263
Length = 262
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 139 LQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKV- 197
L+ +KV I+CQGC KV+K + K+EGV S ID + + V V G++ P +++ ++K
Sbjct: 9 LKTYFLKVNINCQGCKMKVKKTLRKIEGVYSVDIDTDQEAVIVRGNLDPEILVKKLNKRG 68
Query: 198 KKAELLFL 205
K A+L+FL
Sbjct: 69 KHAQLMFL 76
>AT5G19090.1 | chr5:6387910-6389855 FORWARD LENGTH=588
Length = 587
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 139 LQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKV- 197
+Q V+KV IHC GC KV+K + K+EGV + ID E KVTV G+V P+ +++ + K
Sbjct: 9 IQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSG 68
Query: 198 KKAELL 203
K AE+
Sbjct: 69 KHAEIW 74
>AT1G56210.1 | chr1:21035715-21037019 FORWARD LENGTH=365
Length = 364
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 143 VMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKV-KKAE 201
+KV+IHC+GC KV+K ++ +EGV ID++ KVTV+G +SP +L+ ++K K AE
Sbjct: 43 TLKVSIHCEGCKRKVKKILTSIEGVFKVDIDVKQHKVTVIGIISPEILLKKLNKAGKNAE 102
Query: 202 LL 203
L
Sbjct: 103 QL 104
>AT5G05365.1 | chr5:1590125-1590672 FORWARD LENGTH=78
Length = 77
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 140 QVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKVKK 199
VV +KV +HC C K+ K I K+E + ++ +D + KVTV G+V+ V+ + KV+K
Sbjct: 3 NVVELKVNLHCDECIRKILKAIKKIEDIEAYDVDTQLNKVTVTGNVTEEQVIRVLQKVRK 62
Query: 200 A 200
A
Sbjct: 63 A 63
>AT1G71050.1 | chr1:26803322-26803946 REVERSE LENGTH=153
Length = 152
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 138 VLQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKV 197
V+Q V +KV + C GC +V+ +S M+GV S ++ + KVTV G+V P VL+ I +
Sbjct: 26 VMQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRIERT 85
Query: 198 -KKAELL 203
KKAE+
Sbjct: 86 GKKAEIW 92
>AT1G22990.1 | chr1:8139221-8140045 FORWARD LENGTH=153
Length = 152
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 137 QVLQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISK 196
+V+Q V +KV I C GC K++ +S ++G S ++ + KVTV G+V P VL+++
Sbjct: 26 KVMQTVNIKVKIDCDGCERKIKNAVSSIKGAKSVEVNRKMHKVTVSGYVDPKKVLKTVQS 85
Query: 197 V--KKAELL 203
KKAEL
Sbjct: 86 TGKKKAELW 94
>AT5G03380.1 | chr5:832400-834301 REVERSE LENGTH=393
Length = 392
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 134 PGDQVLQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLES 193
P D + VVMK+ +HC+GC K+++ +GV ID +S K+TV+G+V P V +
Sbjct: 18 PTDGGITTVVMKLDMHCEGCGKKIKRIFKHFKGVEDVKIDYKSNKLTVIGNVDPVEVRDK 77
Query: 194 IS 195
++
Sbjct: 78 VA 79
>AT1G23000.1 | chr1:8143614-8144865 FORWARD LENGTH=359
Length = 358
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 139 LQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKV- 197
+Q ++V IHC+GC KV+K + ++EGV I+ E +KVTV G V A ++ + K
Sbjct: 12 IQTFSLRVNIHCEGCNKKVKKLLQRIEGVCHVKIEAEHQKVTVSGSVDSATLINKLVKAG 71
Query: 198 KKAELL 203
K AEL
Sbjct: 72 KHAELW 77
>AT4G38580.1 | chr4:18034596-18035693 FORWARD LENGTH=154
Length = 153
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 139 LQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKV- 197
LQ V +KV + C+GC KVR+ + M+GV+S +++ ++ KVTV+G+V P V+ +S
Sbjct: 25 LQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRT 84
Query: 198 -KKAELL 203
KK EL
Sbjct: 85 GKKVELW 91
>AT4G08570.1 | chr4:5455123-5455975 REVERSE LENGTH=151
Length = 150
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 139 LQVVVMKVA-IHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKV 197
+Q V ++VA I C+GC K++ +S ++GV S +D++ +KVTV G++ P VLE+
Sbjct: 25 MQTVALRVARIDCEGCERKIKHVLSGVKGVKSVDVDVKLQKVTVTGYIDPKKVLEAAKST 84
Query: 198 KKAELLF 204
KK L+
Sbjct: 85 KKKVELW 91
>AT3G56891.1 | chr3:21064199-21064922 REVERSE LENGTH=167
Length = 166
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 139 LQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISK 196
L +V + V + C+GC KVR+ ISK++GV + ID++ +KVTV G+V VL+ + +
Sbjct: 15 LSIVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKR 72
>AT1G06330.1 | chr1:1931671-1932266 REVERSE LENGTH=160
Length = 159
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 139 LQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKV- 197
LQ + M+V + C GC +V+ + KM GV + ID+ +KVTV G+ VL+ + K
Sbjct: 10 LQTIEMRVHMDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVRKTG 69
Query: 198 KKAELLFL 205
++AEL L
Sbjct: 70 RRAELWQL 77
>AT4G35060.1 | chr4:16685874-16686419 REVERSE LENGTH=154
Length = 153
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 139 LQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESI--SK 196
LQ V ++V I C+GC KVR+ + M G+ +I+ ++KVTV+G+V P V+ I
Sbjct: 24 LQTVDVRVLIDCEGCERKVRRALEGMRGIRDVTIEPNAQKVTVVGYVEPNKVVARIIHRT 83
Query: 197 VKKAELL 203
K+AEL
Sbjct: 84 GKRAELY 90
>AT5G66110.1 | chr5:26430245-26430778 FORWARD LENGTH=148
Length = 147
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 139 LQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKV- 197
Q V +KV + C+GC +VRK + M+GV+ ++D + K+TV G V P+ V+ +
Sbjct: 18 FQKVEIKVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVHRVMHRT 77
Query: 198 -KKAELL 203
KKAEL
Sbjct: 78 GKKAELW 84
>AT5G60800.2 | chr5:24460822-24462464 REVERSE LENGTH=303
Length = 302
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 143 VMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESIS-KVKKA 200
V+K+ HCQGC GK++K ++K +GV ++D E +TV G + ++E +S K+K+A
Sbjct: 136 VLKLNFHCQGCIGKIQKTVTKTKGVNGLTMDKEKNLLTVKGTMDVKKLVEILSEKLKRA 194
>AT4G10465.1 | chr4:6473582-6475137 FORWARD LENGTH=184
Length = 183
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 139 LQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKV- 197
LQ V +KV + C GC VR ISK+ GV S +D E +V V+G+V VL+++ +
Sbjct: 50 LQTVELKVRMCCTGCVRIVRNAISKLRGVDSVEVDKELGRVRVVGYVDRNKVLKAVRRAG 109
Query: 198 KKAEL 202
K+AE
Sbjct: 110 KRAEF 114
>AT2G18196.1 | chr2:7920793-7922268 REVERSE LENGTH=179
Length = 178
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 139 LQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISKV- 197
LQ + +KV + C GC V+ I K+ GV S ++LE ++VTV+G+V VL+++ +
Sbjct: 45 LQTIDLKVRMCCSGCERVVKHAIYKLRGVDSVEVNLEMERVTVVGYVERKKVLKAVRRAG 104
Query: 198 KKAELL 203
K+AE
Sbjct: 105 KRAEFW 110
>AT5G50740.3 | chr5:20635983-20637970 REVERSE LENGTH=291
Length = 290
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 37/55 (67%)
Query: 142 VVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESISK 196
VV++V +HC+ CA +++K I +M+GV S D ++ +V+V G +P ++E I K
Sbjct: 133 VVLRVHMHCEACAMEIQKRIMRMKGVESVEPDFKASQVSVKGVFTPEKLVEFIYK 187
>AT5G17450.1 | chr5:5755386-5756743 FORWARD LENGTH=150
Length = 149
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 139 LQVVVMKVAIHCQGCAGKVRKHISKMEGVTSFSIDLESKKVTVMGHVSPAGVLESI-SKV 197
LQ V +KV + C GC +VR + +M+GV S ++ + ++TV GHV P VL+ + S
Sbjct: 25 LQTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTG 84
Query: 198 KKAELL 203
KKAE
Sbjct: 85 KKAEFW 90
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.131 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,654,074
Number of extensions: 64497
Number of successful extensions: 208
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 207
Number of HSP's successfully gapped: 32
Length of query: 205
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 111
Effective length of database: 8,529,465
Effective search space: 946770615
Effective search space used: 946770615
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)