BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0390000 Os08g0390000|AK067513
(621 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G27500.1 | chr4:13743614-13745900 FORWARD LENGTH=613 323 2e-88
AT3G15340.1 | chr3:5160016-5162305 REVERSE LENGTH=590 157 2e-38
AT5G36690.1 | chr5:14415185-14417288 REVERSE LENGTH=577 127 1e-29
AT5G36780.1 | chr5:14474485-14476588 REVERSE LENGTH=577 127 1e-29
AT1G20970.1 | chr1:7314338-7319246 FORWARD LENGTH=1365 97 2e-20
AT1G53110.1 | chr1:19790434-19792016 FORWARD LENGTH=440 89 1e-17
>AT4G27500.1 | chr4:13743614-13745900 FORWARD LENGTH=613
Length = 612
Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/328 (48%), Positives = 226/328 (68%), Gaps = 1/328 (0%)
Query: 61 PKDVVDEWPEPKQTHTFFFVRICSYEDPSLKAKLEQADKECQKKIQARSHIFEALRTKRS 120
PK+ +EWP KQ H+F+ V+ SY DP +KAKL+ ADKE +K +AR+ + + LR KR+
Sbjct: 63 PKNAAEEWPVAKQIHSFYLVKYRSYADPKIKAKLDLADKELEKLNKARTGVLDKLRAKRA 122
Query: 121 ERSNIISELKPLAAENKQYNEVVSGKLKEIEPLQKSLGKFRSENNAMRAQGAGLCSSIEE 180
ERS + L PL +E K +N + K KE+EPLQ++LGK RS N+ A+G +CSS EE
Sbjct: 123 ERSELFDLLDPLKSERKGFNTMFDEKRKEMEPLQQALGKLRS-NDGGSARGPAICSSEEE 181
Query: 181 LDQLIKSLNDRISHESISLDEEKRLVKEIKQLNGTRSKVIENAAKRAKMQDTVVERGTIH 240
L+ +I S RI HESI L EEK+++KEI+ L GTR KVI NAA RAK+++++ ++ I
Sbjct: 182 LNSMIYSYQYRIQHESIPLTEEKQILKEIRLLEGTRDKVIANAAMRAKIKESMGQKDDIQ 241
Query: 241 DQVKQIGVGIDEVKRDRQAVRDKIKVLEDQIHAVDGEIXXXXXXXXXXXXRKDKAFEALN 300
QVK +G G+D VK++RQA+ +I L +++ A EI ++DKA+ ++
Sbjct: 242 GQVKLMGAGLDGVKKERQAISARINELSEKLKATKDEITVLENELKTVSEKRDKAYSNIH 301
Query: 301 ELRKTRDLNNTSFHQYRTISNSVRDLSARGEVEAVQQLCQNEVEKFMAQWCSSKSFREDY 360
+LR+ RD N+ ++Q RT+ N RDL+A+ + ++ L EVEKF++ WCS K+FREDY
Sbjct: 302 DLRRQRDETNSEYYQNRTVLNKARDLAAQKNISELEALANAEVEKFISLWCSKKNFREDY 361
Query: 361 EKRILVSLNSRQLSRDGRMRNPDEKPIV 388
EKRIL SL+SRQLSRDGRMRNPDEKP++
Sbjct: 362 EKRILQSLDSRQLSRDGRMRNPDEKPLI 389
>AT3G15340.1 | chr3:5160016-5162305 REVERSE LENGTH=590
Length = 589
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 184/351 (52%), Gaps = 19/351 (5%)
Query: 43 LENIVTANGATSAADLAPPKDVVDEWPEPKQTHTFFFVRICSYEDPSLKAKLEQADKECQ 102
+ + T +G + D +P +++PE K +F+FV+ +Y+DP +KAK+++A E
Sbjct: 36 VSTVTTEDGTVFSGDSSPGGATEEDFPEEK-PFSFYFVKQPAYDDPEIKAKIDEAGHEIN 94
Query: 103 KKIQARSHIFEALRTKRSERSNIISELKPLAAENKQYNEVVSGKLKEIEPLQKSLGKFRS 162
+ + R + A ++++E ++ ++K L ++++ Y V+ K E + L +SL R
Sbjct: 95 RYNKDRIVVSNAQESEKAEILSLFGQMKSLVSKSEGYRVVIEEKKMEFDALHESLRNLRC 154
Query: 163 ENNAMRAQGAGLCSSIEELDQLIKSLNDRISHESISLDEEKRLVKEIKQLNGTRSKVIEN 222
+ LC S EELD LI + +I H SI +EE ++KE ++ +G
Sbjct: 155 STSDQ------LCFSKEELDHLIYIAHYQIEHGSIGFEEEDWVLKETEKADGI------- 201
Query: 223 AAKRAKMQDTVVERGTIHDQVKQIGVGIDEVKRDRQAVRDKIKVLEDQIHAVDGEIXXXX 282
+D++ E+ ++VK + V ++EVK++ A+ KI L D++ +
Sbjct: 202 ----VLSEDSLAEKEASINRVKSMAVELNEVKKELDAITWKINHLSDKVGKSQNNLRVLD 257
Query: 283 XXXXXXXXRKDKAFEALNELRKTRDLNNTSFHQYRTISNSVRDLSARGEVEAVQQLCQNE 342
+D+++E + LR RD +F+Q + R+L+A G V ++ +E
Sbjct: 258 VKKAHILEERDRSYERIKMLRIQRDKGKAAFYQSLPVMRKARELAASGNVRDLEVFASSE 317
Query: 343 VEKFMAQWCSSKSFREDYEKRILVSLNSRQLSRDGRMRNPDEKPIVLETQV 393
++FM QW K+FR+DY KRI SL RQL++DGR+++P E +V E +V
Sbjct: 318 ADRFMTQWNDDKAFRDDYVKRISPSLCERQLNQDGRIKDP-EVQVVWEKKV 367
>AT5G36690.1 | chr5:14415185-14417288 REVERSE LENGTH=577
Length = 576
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 170/334 (50%), Gaps = 27/334 (8%)
Query: 50 NGATSAADLAPPKDVVDEWPEPKQTHTFFFVRICSYEDPSLKAKLEQADKECQKKIQARS 109
+G S++ LA +D + P +F+ V+ Y++P +KAK+++A++E + + R
Sbjct: 47 SGGDSSSGLAAEEDSSGDKP-----LSFYIVKQPVYDNPEIKAKIDEANQEIFRCNELRI 101
Query: 110 HIFEALRTKRSERSNIISELKPLAAENKQYNEVVSGKLKEIEPLQKSLGKFRSENNAMRA 169
++ A +++ +E S++ ++++ L +++ Y V+ K KE + L ++L R
Sbjct: 102 NVLSAKKSELAEVSSLYTQMESLVPQSEGYRMVIEEKKKEFDTLLEALRNLRC------T 155
Query: 170 QGAGLCSSIEELDQLIKSLNDRISHESISLDEEKRLVKEIKQLNGTRSKVIENAAKRAKM 229
LC + EELD L +I + SI L+EE ++KE ++ +G
Sbjct: 156 TSDQLCFTKEELDHLSYIAQYQIEYGSIGLEEEDWMLKETEKPDGI-------------- 201
Query: 230 QDTVVERGTIHDQVKQIGVGIDEVKRDRQAVRDKIKVLEDQIHAVDGEIXXXXXXXXXXX 289
+ E+ ++VK + + ++EVK + A+ KI L D++ I
Sbjct: 202 --ILSEKEASINRVKSMALELNEVKNELDAITWKINDLSDKLWKSQNNIRVLDLEKAHIL 259
Query: 290 XRKDKAFEALNELRKTRDLNNTSFHQYRTISNSVRDLSARGEVEAVQQLCQNEVEKFMAQ 349
++D+ + + LR RD N +F Q ++ ++L+A G V ++ +EV++FM
Sbjct: 260 EKRDRFYARIKMLRIQRDKGNAAFFQSLSVMCKAKELAASGNVRELEVFASSEVDRFMTL 319
Query: 350 WCSSKSFREDYEKRILVSLNSRQLSRDGRMRNPD 383
W K+FREDY +RI SL R+L+ DGR+++ D
Sbjct: 320 WNDDKAFREDYVRRISHSLCERELNEDGRIKDAD 353
>AT5G36780.1 | chr5:14474485-14476588 REVERSE LENGTH=577
Length = 576
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 170/334 (50%), Gaps = 27/334 (8%)
Query: 50 NGATSAADLAPPKDVVDEWPEPKQTHTFFFVRICSYEDPSLKAKLEQADKECQKKIQARS 109
+G S++ LA +D + P +F+ V+ Y++P +KAK+++A++E + + R
Sbjct: 47 SGGDSSSGLAAEEDSSGDKP-----LSFYIVKQPVYDNPEIKAKIDEANQEIFRCNELRI 101
Query: 110 HIFEALRTKRSERSNIISELKPLAAENKQYNEVVSGKLKEIEPLQKSLGKFRSENNAMRA 169
++ A +++ +E S++ ++++ L +++ Y V+ K KE + L ++L R
Sbjct: 102 NVLSAKKSELAEVSSLYTQMESLVPQSEGYRMVIEEKKKEFDTLLEALRNLRC------T 155
Query: 170 QGAGLCSSIEELDQLIKSLNDRISHESISLDEEKRLVKEIKQLNGTRSKVIENAAKRAKM 229
LC + EELD L +I + SI L+EE ++KE ++ +G
Sbjct: 156 TSDQLCFTKEELDHLSYIAQYQIEYGSIGLEEEDWMLKETEKPDGI-------------- 201
Query: 230 QDTVVERGTIHDQVKQIGVGIDEVKRDRQAVRDKIKVLEDQIHAVDGEIXXXXXXXXXXX 289
+ E+ ++VK + + ++EVK + A+ KI L D++ I
Sbjct: 202 --ILSEKEASINRVKSMALELNEVKNELDAITWKINDLSDKLWKSQNNIRVLDLEKAHIL 259
Query: 290 XRKDKAFEALNELRKTRDLNNTSFHQYRTISNSVRDLSARGEVEAVQQLCQNEVEKFMAQ 349
++D+ + + LR RD N +F Q ++ ++L+A G V ++ +EV++FM
Sbjct: 260 EKRDRFYARIKMLRIQRDKGNAAFFQSLSVMCKAKELAASGNVRELEVFASSEVDRFMTL 319
Query: 350 WCSSKSFREDYEKRILVSLNSRQLSRDGRMRNPD 383
W K+FREDY +RI SL R+L+ DGR+++ D
Sbjct: 320 WNDDKAFREDYVRRISHSLCERELNEDGRIKDAD 353
>AT1G20970.1 | chr1:7314338-7319246 FORWARD LENGTH=1365
Length = 1364
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 150/313 (47%), Gaps = 18/313 (5%)
Query: 77 FFFVRICSYEDPSLKAKLEQADKECQKKIQARSHIFEALRTKRSERSNIISELKPLAAEN 136
+F R+ Y+D L +L+ A+++ +K Q R + ++ R+ + K + AE
Sbjct: 785 YFLPRVPRYDDEKLAEQLKHAEEQVDQKTQNRDALRADIQKIRAICKDYDISYKAVMAEE 844
Query: 137 KQYNEVVSGKLKEIEPLQKSLGKFRSENNAMRAQGAGLCSSIEELDQLIKSLNDRISHES 196
+ + + K +EIE LQ + + +S +S++++D ++++ + H +
Sbjct: 845 RSARKAMHSKRQEIEALQSMISRVKS------------AASVDDIDSRVRNMEHTMQHTT 892
Query: 197 ISLDEEKRLVKEIKQLNGTRSKVIENAAKRAKMQDTVVERGTIHDQVKQIGVGIDEVKRD 256
+SL+EEK ++EIKQL R ++ + + +++ + E+ +++K + +D ++ D
Sbjct: 893 LSLNEEKGFMREIKQLKQLREQISSSMGTKDEVKQALDEKEKTEERLKVLRKELDALRND 952
Query: 257 RQAVRDKIKVLEDQIHAVDGEIXXXXXXXX---XXXXRKDKAFEALNELRKTRDLNNTSF 313
+ K + + DGE + +AF L +L+K + N F
Sbjct: 953 LSKAEEITKAAKKK---CDGEWEAQSKLQEQFRAADAVRQEAFVHLQDLKKQQREKNKYF 1009
Query: 314 HQYRTISNSVRDLSARGEVEAVQQLCQNEVEKFMAQWCSSKSFREDYEKRILVSLNSRQL 373
+YR S + +++ + + A+Q LC ++VE FM W + FR+ Y K S R
Sbjct: 1010 FKYRDNSRAASEMALKKDRAALQSLCSDQVENFMNMWNNDDEFRKYYVKSNTRSTFRRLG 1069
Query: 374 SRDGRMRNPDEKP 386
+ DGR PDE+P
Sbjct: 1070 TLDGRSLGPDEEP 1082
>AT1G53110.1 | chr1:19790434-19792016 FORWARD LENGTH=440
Length = 439
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 84/136 (61%)
Query: 246 IGVGIDEVKRDRQAVRDKIKVLEDQIHAVDGEIXXXXXXXXXXXXRKDKAFEALNELRKT 305
+ + I+EV+++++ VR +I L +++ + EI ++DKA E + LR
Sbjct: 108 MSMKINEVEKEQEVVRGRIYRLGERLSEIKMEIELLDVQMACVLNQRDKAVERIKFLRMQ 167
Query: 306 RDLNNTSFHQYRTISNSVRDLSARGEVEAVQQLCQNEVEKFMAQWCSSKSFREDYEKRIL 365
RD N +F+Q R + +L+A G V +++L +EVEKFM++W + K+FR++Y+KRIL
Sbjct: 168 RDKGNAAFYQSRVVMKKAIELAASGNVRDLEELADSEVEKFMSRWNNDKAFRDNYKKRIL 227
Query: 366 VSLNSRQLSRDGRMRN 381
S+N R+L D ++R+
Sbjct: 228 PSVNERKLRCDVQIRD 243
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 66 DEWPEPKQTHTFFFVRICSYEDPSLKAKLEQADKECQKKIQARSHIFEALRTKRSERSNI 125
+EW + ++ F+FV+ +Y+DP +KAK+++AD E R HI L++KR+ R ++
Sbjct: 42 EEWC-GESSYCFYFVKQFAYDDPEIKAKIDEADHEVYHCNTDRIHIANRLKSKRAARLSL 100
Query: 126 ISELKPLAA----ENKQYNEVVSGKL 147
++ ++ L + E ++ EVV G++
Sbjct: 101 VASMETLMSMKINEVEKEQEVVRGRI 126
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.127 0.344
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,686,472
Number of extensions: 312452
Number of successful extensions: 1246
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1251
Number of HSP's successfully gapped: 7
Length of query: 621
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 516
Effective length of database: 8,227,889
Effective search space: 4245590724
Effective search space used: 4245590724
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 115 (48.9 bits)