BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0379400 Os08g0379400|AK069608
(390 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G23740.1 | chr1:8398245-8399656 REVERSE LENGTH=387 442 e-124
AT4G13010.1 | chr4:7600682-7602567 FORWARD LENGTH=330 92 7e-19
AT4G21580.1 | chr4:11475822-11477514 FORWARD LENGTH=326 87 1e-17
AT3G15090.1 | chr3:5076847-5078870 FORWARD LENGTH=367 84 9e-17
AT3G56460.1 | chr3:20933029-20934425 REVERSE LENGTH=349 67 2e-11
AT1G49670.2 | chr1:18381591-18386021 REVERSE LENGTH=653 61 1e-09
AT5G63620.1 | chr5:25466380-25468296 REVERSE LENGTH=428 48 8e-06
>AT1G23740.1 | chr1:8398245-8399656 REVERSE LENGTH=387
Length = 386
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/313 (72%), Positives = 245/313 (78%)
Query: 78 VPATMKAWAYDDYGDGSVLKLNDAAAVPDIADDQVLVRVAAAALNPVDAKRRAGKFKATD 137
+P MKAW Y DYG VLKL VP+I +DQVL++V AAALNPVDAKRR GKFKATD
Sbjct: 74 IPKEMKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATD 133
Query: 138 SPLPTVPGYDXXXXXXXXXXXXXXLKEGDEVYGNISEKALEGPKQSGSLAEYTAVEEKLL 197
SPLPTVPGYD LKEGDEVY N+SEKALEGPKQ GSLAEYTAVEEKLL
Sbjct: 134 SPLPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLL 193
Query: 198 ALKPKSLGFAQAAGLPLAIETAHEGLERAGFSAGKSILILGGAGGVGSLAIQLAKHVYGA 257
ALKPK++ FAQAAGLPLAIETA EGL R FSAGKSIL+L GAGGVGSL IQLAKHVYGA
Sbjct: 194 ALKPKNIDFAQAAGLPLAIETADEGLVRTEFSAGKSILVLNGAGGVGSLVIQLAKHVYGA 253
Query: 258 SKVAATASTPKLELLKSLGADVAIDYTKENFEDLPDKYDVVLDXXXXXXXXXXXXXXXXX 317
SKVAATAST KLEL++SLGAD+AIDYTKEN EDLPDKYDVV D
Sbjct: 254 SKVAATASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCDKAVKVIKEGGK 313
Query: 318 XXXLTGAVVPPGFRFVVTSDGSVLEKLNPYLESGKVKPLVDPKGPFAFSQVVEAFSYLET 377
LTGAV PPGFRFVVTS+G VL+KLNPY+ESGKVKP+VDPKGPF FS+V +AFSYLET
Sbjct: 314 VVALTGAVTPPGFRFVVTSNGDVLKKLNPYIESGKVKPVVDPKGPFPFSRVADAFSYLET 373
Query: 378 GRATGKVVISPIP 390
ATGKVV+ PIP
Sbjct: 374 NHATGKVVVYPIP 386
>AT4G13010.1 | chr4:7600682-7602567 FORWARD LENGTH=330
Length = 329
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 143/337 (42%), Gaps = 43/337 (12%)
Query: 82 MKAWAYDDYGDGSVLKLNDAAAVPDIADDQVLVRVAAAALNPVDAKRRAGKFKA-TDSPL 140
M A Y+ YG G+ + VP ++V +++ A +LNPVD K + G +
Sbjct: 6 MHALQYNSYGGGAAGLEHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPRKF 65
Query: 141 PTVPGYDXXXXXXXXXXXXXXLKEGDEVYGNISEKALEGPKQSGSLAEYTAVEEKLLALK 200
P +P D K GD+V +S L G G LAE+ EKL +
Sbjct: 66 PCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSH--LGG----GGLAEFAVATEKLTVKR 119
Query: 201 PKSLGFAQAAGLPLAIETAHE------GLERAGFSAGKSILILGGAGGVGSLAIQLAKHV 254
P+ +G A+AA LP+A TA + GL+ G +IL+ +GGVG A+QLAK
Sbjct: 120 PQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAK-- 177
Query: 255 YGASKVAATASTPKLELLKSLGADVAIDYTKENFEDLPD----KYDVVLDXXXXXXXXXX 310
+ V AT +E +KSLGAD +DY L KYD V+
Sbjct: 178 LANAHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFSVF 237
Query: 311 XXXXXXXXXXLTGAVVPPG----FRFVVTSDGSVLEKLNPYL---------------ESG 351
+ + PG + + V ++L P L + G
Sbjct: 238 EPNLSENGKVID---ITPGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEG 294
Query: 352 KVKPLVDPKGPFAFSQVVEAFSYLETGRATGKVVISP 388
KVK ++D K P S+ +A++ G ATGK+++ P
Sbjct: 295 KVKTVIDSKHP--LSKAEDAWAKSIDGHATGKIIVEP 329
>AT4G21580.1 | chr4:11475822-11477514 FORWARD LENGTH=326
Length = 325
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 135/339 (39%), Gaps = 50/339 (14%)
Query: 82 MKAWAYDDYGDGSVLKLNDAAAVPDIADDQVLVRVAAAALNPVDAKRRAGKFKATDSPLP 141
MKA + G VL+L D A P++ DD+VL+RV A ALN D +R G + P
Sbjct: 1 MKAIVISEPGKPEVLQLRDVAD-PEVKDDEVLIRVLATALNRADTLQRLGLYNPPPGSSP 59
Query: 142 TVPGYDXXXXXXXXXXXXXXLKEGDEVYGNISEKALEGPKQSGSLAEYTAVEEKLLALKP 201
+ G + K GD+V +S G AE +V + P
Sbjct: 60 YL-GLECSGTIESVGKGVSRWKVGDQVCALLS---------GGGYAEKVSVPAGQIFPIP 109
Query: 202 KSLGFAQAAGLPLAIETAHEGLERAG-FSAGKSILILGGAGGVGSLAIQLAKHVYGASKV 260
+ AA P T + G S G+S LI GG+ G+G+ AIQ+AKH+ G
Sbjct: 110 AGISLKDAAAFPEVACTVWSTVFMMGRLSVGESFLIHGGSSGIGTFAIQIAKHL-GVRVF 168
Query: 261 AATASTPKLELLKSLGADVAIDYTKENF------EDLPDKYDVVLDXX------------ 302
S KL K LGADV I+Y E+F E DV+LD
Sbjct: 169 VTAGSDEKLAACKELGADVCINYKTEDFVAKVKAETDGKGVDVILDCIGAPYLQKNLDSL 228
Query: 303 -------------XXXXXXXXXXXXXXXXXXLTGAVVP--PGFRFVVTSDGSVLEKLNPY 347
L A+ P P + VV + V + + P
Sbjct: 229 NFDGRLCIIGLMGGANAEIKLSSLLPKRLTVLGAALRPRSPENKAVVVRE--VEKNVWPA 286
Query: 348 LESGKVKPLVDPKGPFAFSQVVEAFSYLETGRATGKVVI 386
+E+GKVKP++ P SQ E S +E+ GK+++
Sbjct: 287 IEAGKVKPVIYKYLP--LSQAAEGHSLMESSNHIGKILL 323
>AT3G15090.1 | chr3:5076847-5078870 FORWARD LENGTH=367
Length = 366
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 108/214 (50%), Gaps = 10/214 (4%)
Query: 90 YGDGSVLKLNDAAAVPDIADDQVLVRVAAAALNPVDAKRRAGKFKATDSP-LPTVPGYDX 148
+G V +L + VP++ ++VLV+ A ++NP+D + RAG ++ P LP + G D
Sbjct: 40 FGGPEVFELRENVPVPNLNPNEVLVKAKAVSVNPLDCRIRAGYGRSVFQPHLPIIVGRDV 99
Query: 149 XXXXXXXXXXXXXLKEGDEVYGNISEKALEGPKQSGSLAEYTAVEEKLLALKPKSLGFAQ 208
LK G EV+G + AL G+ +Y + E L KP S+ +
Sbjct: 100 SGEVAAIGTSVKSLKVGQEVFGALHPTALR-----GTYTDYGILSEDELTEKPSSISHVE 154
Query: 209 AAGLPLAIETAHEGLE-RAGFSAGKSILILGGAGGVGSLAIQLAKHVYGASKVAATASTP 267
A+ +P A TA L+ A + G+ +L+ GG G VG AIQLA V V A+
Sbjct: 155 ASAIPFAALTAWRALKSNARITEGQRLLVFGGGGAVGFSAIQLA--VASGCHVTASCVGQ 212
Query: 268 KLELLKSLGADVAIDYTKENFE-DLPDKYDVVLD 300
+ + + GA+ A+DYT E+ E + K+D VLD
Sbjct: 213 TKDRILAAGAEQAVDYTTEDIELAVKGKFDAVLD 246
>AT3G56460.1 | chr3:20933029-20934425 REVERSE LENGTH=349
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 16/183 (8%)
Query: 108 ADDQVLVRVAAAALNPVDAKRRAGKFKATDSPLPTVPGYDXXXXXXXXXXXXXXLKEGDE 167
+D V VRV A +LN + + GK++ PLP +PG D + GD
Sbjct: 37 SDTSVRVRVIATSLNYANYLQILGKYQE-KPPLPFIPGSDYSGIVDAIGPAVTKFRVGDR 95
Query: 168 V--YGNISEKALEGPKQSGSLAEYTAVEEKLLALKPKSLGFAQAAGLPLAIETAHEGL-E 224
V + ++ GS A++ ++ L L P+ AA LP+A T+H L
Sbjct: 96 VCSFADL-----------GSFAQFIVADQSRLFLVPERCDMVAAAALPVAFGTSHVALVH 144
Query: 225 RAGFSAGKSILILGGAGGVGSLAIQLAKHVYGASKVAATASTPKLELLKSLGADVAIDYT 284
RA ++G+ +L+LG AGGVG A+Q+ K V GA +A T K++LLKS+G D +D
Sbjct: 145 RARLTSGQVLLVLGAAGGVGLAAVQIGK-VCGAIVIAVARGTEKIQLLKSMGVDHVVDLG 203
Query: 285 KEN 287
EN
Sbjct: 204 TEN 206
>AT1G49670.2 | chr1:18381591-18386021 REVERSE LENGTH=653
Length = 652
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 122/331 (36%), Gaps = 48/331 (14%)
Query: 107 IADDQVLVRVAAAALNPVDAKRRAGKFKATDSP-LPTVPGYDXXXXXXXXXXXXXXLKEG 165
I QVL+++ A +N D +G++ SP LP G++ L+ G
Sbjct: 314 IGPHQVLLKIIYAGVNASDVNFSSGRYFTGGSPKLPFDAGFEGVGLIAAVGESVKNLEVG 373
Query: 166 D----EVYGNISEKALEGPKQS--------GSLAEYTAVEEKLLALKPKSLGFAQAAGLP 213
+G SE + K +A T+ L+AL+ L
Sbjct: 374 TPAAVMTFGAYSEYMIVSSKHVLPVPRPDPEVVAMLTSGLTALIALEKLYDILKLLVQLS 433
Query: 214 LAIETAHEGLERAGFSAGKSILILGGAGGVGSLAIQLAKHVYGASKVAATASTPKLELLK 273
L ++ + +G+++L+ AGG G A+QLAK + G +A + K +LLK
Sbjct: 434 LTFSLSYGNSQAGQMKSGETVLVTAAAGGTGQFAVQLAK-LSGNKVIATCGGSEKAKLLK 492
Query: 274 SLGADVAIDYTKENFEDLPDK-----------------YDVVLDXXXXXXXXXXXXXXXX 316
LG D IDY EN + + K +D+ L+
Sbjct: 493 ELGVDRVIDYKSENIKTVLKKEFPKGVNIIYESVGGQMFDMCLNALAVYGRLIVIGMISQ 552
Query: 317 ---------------XXXXLTGAVVPPGFRFVVTSD--GSVLEKLNPYLESGKVKPLVDP 359
L + GF V S L+KL GK+K +D
Sbjct: 553 YQGEKGWEPAKYPGLCEKILAKSQTVAGFFLVQYSQLWKQNLDKLFNLYALGKLKVGIDQ 612
Query: 360 KGPFAFSQVVEAFSYLETGRATGKVVISPIP 390
K + V +A YL +G++TGKVV+ P
Sbjct: 613 KKFIGLNAVADAVEYLHSGKSTGKVVVCIDP 643
>AT5G63620.1 | chr5:25466380-25468296 REVERSE LENGTH=428
Length = 427
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 184 GSLAEYTAVEEKLLALKPKSLGFAQAAGLPLAIETAHEGLERAG-FSAGKSILILGGAGG 242
G +AEY LA P+SL ++++A L A+ TA+ + A G SI ++G GG
Sbjct: 198 GGMAEYCVTPAHGLAPLPESLPYSESAILGCAVFTAYGAMAHAAEIRPGDSIAVIG-IGG 256
Query: 243 VGSLAIQLAKHVYGASKVAAT-ASTPKLELLKSLGADVAIDYTKEN 287
VGS +Q+A+ +GAS + A KL+ K+LGA ++ KE+
Sbjct: 257 VGSSCLQIAR-AFGASDIIAVDVQDDKLQKAKTLGATHIVNAAKED 301
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.133 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,724,595
Number of extensions: 236900
Number of successful extensions: 577
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 566
Number of HSP's successfully gapped: 8
Length of query: 390
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 290
Effective length of database: 8,364,969
Effective search space: 2425841010
Effective search space used: 2425841010
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 113 (48.1 bits)