BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0342400 Os08g0342400|AK073790
(763 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G19710.2 | chr4:10725229-10729536 FORWARD LENGTH=917 1247 0.0
AT1G31230.1 | chr1:11158744-11163055 REVERSE LENGTH=912 1213 0.0
AT5G21060.2 | chr5:7149153-7152745 REVERSE LENGTH=379 194 2e-49
AT3G02020.1 | chr3:340739-343410 REVERSE LENGTH=560 144 2e-34
AT5G14060.1 | chr5:4536143-4538993 FORWARD LENGTH=545 141 2e-33
AT5G13280.1 | chr5:4249516-4252654 FORWARD LENGTH=570 133 4e-31
>AT4G19710.2 | chr4:10725229-10729536 FORWARD LENGTH=917
Length = 916
Score = 1247 bits (3227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/764 (77%), Positives = 677/764 (88%), Gaps = 1/764 (0%)
Query: 1 DEVFEKHMAAAKDLLGGEDLARFLSQLHADVSNLKAMLRAICIAGHATESFSDFVVGHGE 60
+ V EKH A+DLL G+DLA FLS LH D+SNLKAMLRAI IAGHA+ESFSDFV GHGE
Sbjct: 153 EAVLEKHRLTARDLLDGDDLASFLSHLHNDISNLKAMLRAIYIAGHASESFSDFVAGHGE 212
Query: 61 IWSAQLLSFAIKKSGTPCSWMDTREVLVVNPTGSNQVDPDYLESEKRLEKWFARQPAETI 120
+WSAQ+LS+ ++K+G C WMDTR+VL+VNPT SNQVDPD+ ESEKRL+KWF+ P++ I
Sbjct: 213 LWSAQMLSYVVRKTGLECKWMDTRDVLIVNPTSSNQVDPDFGESEKRLDKWFSLNPSKII 272
Query: 121 IATGFIASTPENIPTTLKRDGSDFSAAIIGSLVKAGQVTIWTDVDGVFSADPRKVSEAVI 180
IATGFIASTP+NIPTTLKRDGSDFSAAI+G+L++A QVTIWTDVDGV+SADPRKV+EAVI
Sbjct: 273 IATGFIASTPQNIPTTLKRDGSDFSAAIMGALLRARQVTIWTDVDGVYSADPRKVNEAVI 332
Query: 181 LSTLSYQEAWEMSYFGANVLHPRTIIPVMKYNIPIVIRNMFNISAPGTMICQQPANESG- 239
L TLSYQEAWEMSYFGANVLHPRTIIPVM+YNIPIVIRN+FN+SAPGT+ICQ P ++
Sbjct: 333 LQTLSYQEAWEMSYFGANVLHPRTIIPVMRYNIPIVIRNIFNLSAPGTIICQPPEDDYDL 392
Query: 240 DLEACVKAFATIDKLSLVNVEGTGMAGVPGTASAIFGAVKDVGANVIMISQASSEHSVCF 299
L VK FATID L+L+NVEGTGMAGVPGTAS IFG VKDVGANVIMISQASSEHSVCF
Sbjct: 393 KLTTPVKGFATIDNLALINVEGTGMAGVPGTASDIFGCVKDVGANVIMISQASSEHSVCF 452
Query: 300 AVPEKEVAAVSAALHVRFREALSAGRLSKVEVIHNCSILAAVGLKMASTPGVSATLFDAL 359
AVPEKEV AVS AL RF EAL AGRLS++EVI NCSILAAVG KMASTPGVS TLF AL
Sbjct: 453 AVPEKEVNAVSEALRSRFSEALQAGRLSQIEVIPNCSILAAVGQKMASTPGVSCTLFSAL 512
Query: 360 AKANINVRAIAQGCSEYNITVVLKQEDCVRALRAAHSRFFLSKTTLAVGIIGPGLIGRTL 419
AKANINVRAI+QGCSEYN+TVV+K+ED V+ALRA HSRFFLS+TTLA+GI+GPGLIG TL
Sbjct: 513 AKANINVRAISQGCSEYNVTVVIKREDSVKALRAVHSRFFLSRTTLAMGIVGPGLIGATL 572
Query: 420 LNQLKDQAAVLKENMNIDLRVMGITGSRTMVLSDTGIDLAHWKEQLQTEAEPANLDKFVD 479
L+QL+DQAAVLK+ NIDLRV+GITGS+ M+LSD GIDL+ W+E L + A+LDKF
Sbjct: 573 LDQLRDQAAVLKQEFNIDLRVLGITGSKKMLLSDIGIDLSRWRELLNEKGTEADLDKFTQ 632
Query: 480 HLSENQLFPNRVLVDCTADTSVASHYYDWLKKGIHVITPNKKANSGPLDKYLKLRTLQRA 539
+ N PN V+VDCTAD+++AS YYDWL+KGIHVITPNKKANSGPLD+YLKLR LQR
Sbjct: 633 QVHGNHFIPNSVVVDCTADSAIASRYYDWLRKGIHVITPNKKANSGPLDQYLKLRDLQRK 692
Query: 540 SYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFEGTRAFSDVVS 599
SYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGI SGTLSY+FNNF G R+FS+VV+
Sbjct: 693 SYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGICSGTLSYLFNNFVGDRSFSEVVT 752
Query: 600 EAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDIPVRSLVPEALRSCSTADEY 659
EAK AG+TEPDPRDDLSGTDVARKVIILARESGLKL+L+D+P+RSLVPE L+ C++ +E+
Sbjct: 753 EAKNAGFTEPDPRDDLSGTDVARKVIILARESGLKLDLADLPIRSLVPEPLKGCTSVEEF 812
Query: 660 MQKLPSFDQDWARESKDAEAAGEVLRYVGVVDLVNKEGQVELRRYKKDHPFAQLSGSDNI 719
M+KLP +D D A+E DAE +GEVLRYVGVVD VN++G VELRRYKK+HPFAQL+GSDNI
Sbjct: 813 MEKLPQYDGDLAKERLDAENSGEVLRYVGVVDAVNQKGTVELRRYKKEHPFAQLAGSDNI 872
Query: 720 IAFTTSRYKEQPLIVRGPGAGAEVTAGGVFSDILRLASYLGAPS 763
IAFTT+RYK+ PLIVRGPGAGA+VTAGG+FSDILRLASYLGAPS
Sbjct: 873 IAFTTTRYKDHPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 916
>AT1G31230.1 | chr1:11158744-11163055 REVERSE LENGTH=912
Length = 911
Score = 1213 bits (3138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/762 (76%), Positives = 684/762 (89%), Gaps = 1/762 (0%)
Query: 3 VFEKHMAAAKDLLGGEDLARFLSQLHADVSNLKAMLRAICIAGHATESFSDFVVGHGEIW 62
V EKH A A DLL G++L+ FL++L+ D++NLKAMLRAI IAGHATESFSDFVVGHGE+W
Sbjct: 150 VLEKHRATAVDLLDGDELSSFLARLNDDINNLKAMLRAIYIAGHATESFSDFVVGHGELW 209
Query: 63 SAQLLSFAIKKSGTPCSWMDTREVLVVNPTGSNQVDPDYLESEKRLEKWFARQPAETIIA 122
SAQ+L+ ++KSG C+WMD R+VLVV PT SNQVDPD++ESEKRLEKWF + A+ IIA
Sbjct: 210 SAQMLAAVVRKSGLDCTWMDARDVLVVIPTSSNQVDPDFVESEKRLEKWFTQNSAKIIIA 269
Query: 123 TGFIASTPENIPTTLKRDGSDFSAAIIGSLVKAGQVTIWTDVDGVFSADPRKVSEAVILS 182
TGFIASTP+NIPTTLKRDGSDFSAAI+ +L ++ Q+TIWTDVDGV+SADPRKVSEAV+L
Sbjct: 270 TGFIASTPQNIPTTLKRDGSDFSAAIMSALFRSHQLTIWTDVDGVYSADPRKVSEAVVLK 329
Query: 183 TLSYQEAWEMSYFGANVLHPRTIIPVMKYNIPIVIRNMFNISAPGTMICQQPANESG-DL 241
TLSYQEAWEMSYFGANVLHPRTIIPVMKY+IPIVIRN+FN+SAPGTMIC+Q +E G L
Sbjct: 330 TLSYQEAWEMSYFGANVLHPRTIIPVMKYDIPIVIRNIFNLSAPGTMICRQIDDEDGFKL 389
Query: 242 EACVKAFATIDKLSLVNVEGTGMAGVPGTASAIFGAVKDVGANVIMISQASSEHSVCFAV 301
+A VK FATID L+LVNVEGTGMAGVPGTASAIF AVK+VGANVIMISQASSEHSVCFAV
Sbjct: 390 DAPVKGFATIDNLALVNVEGTGMAGVPGTASAIFSAVKEVGANVIMISQASSEHSVCFAV 449
Query: 302 PEKEVAAVSAALHVRFREALSAGRLSKVEVIHNCSILAAVGLKMASTPGVSATLFDALAK 361
PEKEV AVS AL+ RFR+AL+ GRLS++E+I NCSILAAVG KMASTPGVSAT F+ALAK
Sbjct: 450 PEKEVKAVSEALNSRFRQALAGGRLSQIEIIPNCSILAAVGQKMASTPGVSATFFNALAK 509
Query: 362 ANINVRAIAQGCSEYNITVVLKQEDCVRALRAAHSRFFLSKTTLAVGIIGPGLIGRTLLN 421
ANIN+RAIAQGCSE+NITVV+K+EDC+RALRA HSRF+LS+TTLAVGIIGPGLIG TLL+
Sbjct: 510 ANINIRAIAQGCSEFNITVVVKREDCIRALRAVHSRFYLSRTTLAVGIIGPGLIGGTLLD 569
Query: 422 QLKDQAAVLKENMNIDLRVMGITGSRTMVLSDTGIDLAHWKEQLQTEAEPANLDKFVDHL 481
Q++DQAAVLKE IDLRV+GITGS M++S++GIDL+ W+E ++ E E A+++KF ++
Sbjct: 570 QIRDQAAVLKEEFKIDLRVIGITGSSKMLMSESGIDLSRWRELMKEEGEKADMEKFTQYV 629
Query: 482 SENQLFPNRVLVDCTADTSVASHYYDWLKKGIHVITPNKKANSGPLDKYLKLRTLQRASY 541
N PN V+VDCTAD +AS YYDWL +GIHV+TPNKKANSGPLD+YLK+R LQR SY
Sbjct: 630 KGNHFIPNSVMVDCTADADIASCYYDWLLRGIHVVTPNKKANSGPLDQYLKIRDLQRKSY 689
Query: 542 THYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFEGTRAFSDVVSEA 601
THYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSY+FNNF GTR+FS+VV+EA
Sbjct: 690 THYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYLFNNFVGTRSFSEVVAEA 749
Query: 602 KEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDIPVRSLVPEALRSCSTADEYMQ 661
K+AG+TEPDPRDDLSGTDVARKV ILARESGLKL+L +PV++LVP+ L++C++A+E+M+
Sbjct: 750 KQAGFTEPDPRDDLSGTDVARKVTILARESGLKLDLEGLPVQNLVPKPLQACASAEEFME 809
Query: 662 KLPSFDQDWARESKDAEAAGEVLRYVGVVDLVNKEGQVELRRYKKDHPFAQLSGSDNIIA 721
KLP FD++ +++ ++AEAAGEVLRYVGVVD V K+G VEL+RYKKDHPFAQLSG+DNIIA
Sbjct: 810 KLPQFDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHPFAQLSGADNIIA 869
Query: 722 FTTSRYKEQPLIVRGPGAGAEVTAGGVFSDILRLASYLGAPS 763
FTT RYKEQPLIVRGPGAGA+VTAGG+FSDILRLA YLGAPS
Sbjct: 870 FTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLAFYLGAPS 911
>AT5G21060.2 | chr5:7149153-7152745 REVERSE LENGTH=379
Length = 378
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 196/379 (51%), Gaps = 45/379 (11%)
Query: 409 IIGPGLIGRTLLNQLKDQAAVLKENMNIDLRVMGITGSRTMVLSDTGIDLAHWKEQLQTE 468
++G G +GR LL + + L M + +RV+G+ S+++V +D+ KE+L E
Sbjct: 8 LMGCGGVGRHLLQHIVSCRS-LHAKMGVHIRVIGVCDSKSLV---APMDV--LKEELNDE 61
Query: 469 ---------AEPANLDKF---------VDHLSENQLFPNRV-----------LVDCTADT 499
+ + L K V H SE + +VDC+A
Sbjct: 62 LLSEVCLIKSTGSALSKLGALEKGGYRVVHDSELSTETEEIAKLLGKSTGLAVVDCSASM 121
Query: 500 SVASHYYDWLKKGIHVITPNKKANSGPLDKYLKLRTLQRASYTHYF-YEATVGAGLPIIS 558
+ G ++ NKK + L+ Y KL A + + +E+TVGAGLP+I+
Sbjct: 122 ETIEILMKAVDLGCCIVLANKKPVTSTLEHYDKL-----ALHPRFIRHESTVGAGLPVIA 176
Query: 559 TLRGLLETGDKILRIEGIFSGTLSYIFNNFEGTRAFSDVVSEAKEAGYTEPDPRDDLSGT 618
+L ++ +GD + RI G SGTL Y+ + E + S VV AK+ GYTEPDPRDDL G
Sbjct: 177 SLNRIISSGDPVHRIVGSLSGTLGYVMSELEDGKPLSQVVQAAKKLGYTEPDPRDDLGGM 236
Query: 619 DVARKVIILARESGLKLELSDIPVRSLVPEALR-SCSTADEYMQK-LPSFDQDWARESKD 676
DVARK +ILAR G ++ + I + SL PE + + D+++ + DQ+ K
Sbjct: 237 DVARKGLILARLLGKRIIMDSIKIESLYPEEMGPGLMSVDDFLHNGIVKLDQNIEERVKK 296
Query: 677 AEAAGEVLRYVGVVDLVNKEGQVELRRYKKDHPFAQLSGSDNIIAFTTSRYKEQPLIVRG 736
A + G VLRYV V++ QV +R KD P +L GSDNI+ + YKEQPL+++G
Sbjct: 297 ASSKGCVLRYVCVIE--GSSVQVGIREVSKDSPLGRLRGSDNIVEIYSRCYKEQPLVIQG 354
Query: 737 PGAGAEVTAGGVFSDILRL 755
GAG + TA GV +DI+ L
Sbjct: 355 AGAGNDTTAAGVLADIIDL 373
>AT3G02020.1 | chr3:340739-343410 REVERSE LENGTH=560
Length = 559
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 197/391 (50%), Gaps = 20/391 (5%)
Query: 34 LKAMLRAICIAGHATESFSDFVVGHGEIWSAQLLSFAIKKSGTPCSWMDTREVLVVNPTG 93
L+ +L+ + + T D++V GE S +L + + K G D E+ ++ T
Sbjct: 178 LEQLLKGVAMMKELTLRSRDYLVSFGECMSTRLFAAYLNKIGHKARQYDAFEIGII--TT 235
Query: 94 SNQVDPDYLE------SEKRLEKWFARQPAETIIATGFIASTPENIP-TTLKRDGSDFSA 146
+ + D LE S+K L W +++ A ++ TGF+ + TTL R GSD +A
Sbjct: 236 DDFTNADILEATYPAVSKKLLGDW-SKENALPVV-TGFLGKGWRSCAVTTLGRGGSDLTA 293
Query: 147 AIIGSLVKAGQVTIWTDVDGVFSADPRKVSEAVILSTLSYQEAWEMSYFGANVLHPRTII 206
IG + ++ +W DVDGV + DP A + L++ EA E++YFGA VLHP ++
Sbjct: 294 TTIGKALGLREIQVWKDVDGVLTCDPNIYCGAQPVPHLTFDEAAELAYFGAQVLHPLSMR 353
Query: 207 PVMKYNIPIVIRNMFNISAPGTMICQQPANESGDL-EACVKAFATIDKLSLVNVEGTGMA 265
P + NIP+ ++N +N +APGT+I S D+ +A + + ++++++ T M
Sbjct: 354 PAREGNIPVRVKNSYNPTAPGTVI-----TRSRDMSKAVLTSIVLKRNVTMLDITSTRML 408
Query: 266 GVPGTASAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVAAVSAALHVRFREALSAGR 325
G G + +F + +G +V ++ A+SE S+ + + + H + +
Sbjct: 409 GQYGFLAKVFSTFEKLGISVDVV--ATSEVSISLTLDPSKFCSRELIQHELDQVVEELEK 466
Query: 326 LSKVEVIHNCSILAAVGLKMASTPGVSATLFDALAKANINVRAIAQGCSEYNITVVLKQE 385
++ V ++ + SI++ +G + + + F L INV+ I+QG S+ NI++++ +
Sbjct: 467 IAVVNLLRHRSIISLIG-NVQRSSFILEKGFRVLRTNGINVQMISQGASKVNISLIVNDD 525
Query: 386 DCVRALRAAHSRFFLSKTTLAVGIIGPGLIG 416
+ ++A HS FF + T AV G I
Sbjct: 526 EAEHCVKALHSAFFETDTCEAVSECPTGYIA 556
>AT5G14060.1 | chr5:4536143-4538993 FORWARD LENGTH=545
Length = 544
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 192/380 (50%), Gaps = 16/380 (4%)
Query: 27 LHADVSNLKAMLRAICIAGHATESFSDFVVGHGEIWSAQLLSFAIKKSGTPCSWMDTREV 86
+ + L +L+ I + T D++V GE S +L S + K G D E+
Sbjct: 170 IEKHLEGLHQLLKGISMMKELTLRTRDYLVSFGECMSTRLFSAYLNKIGHKARQYDAFEI 229
Query: 87 LVVNP---TGSNQVDPDYLESEKRLEKWFARQPAETIIATGFIASTPENIP-TTLKRDGS 142
+ T ++ ++ Y K L ++++ A ++ TG++ + TTL R GS
Sbjct: 230 GFITTDDFTNADILEATYPAVSKTLVGDWSKENAVPVV-TGYLGKGWRSCAITTLGRGGS 288
Query: 143 DFSAAIIGSLVKAGQVTIWTDVDGVFSADPRKVSEAVILSTLSYQEAWEMSYFGANVLHP 202
D +A IG + ++ +W DVDGV + DP A + L++ EA E++YFGA VLHP
Sbjct: 289 DLTATTIGKALGLREIQVWKDVDGVLTCDPNIYPGAQSVPYLTFDEAAELAYFGAQVLHP 348
Query: 203 RTIIPVMKYNIPIVIRNMFNISAPGTMICQQPANESGDL-EACVKAFATIDKLSLVNVEG 261
++ P +IP+ ++N +N +APGT+I + S D+ +A + + ++++++
Sbjct: 349 LSMRPARDGDIPVRVKNSYNPTAPGTVITR-----SRDMSKAVLTSIVLKRNVTMLDIAS 403
Query: 262 TGMAGVPGTASAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVAAVSAALHVRFREAL 321
T M G G + +F +D+G +V ++ A+SE S+ + ++ V + L
Sbjct: 404 TRMLGQYGFLAKVFTTFEDLGISVDVV--ATSEVSISLTLDPAKLWGRELIQRVNELDNL 461
Query: 322 --SAGRLSKVEVIHNCSILAAVGLKMASTPGVSATLFDALAKANINVRAIAQGCSEYNIT 379
+++ V+++ SI++ +G + + + +F +NV+ I+QG S+ NI+
Sbjct: 462 VEELEKIAVVKLLQRRSIISLIG-NVQKSSLILEKVFQVFRSNGVNVQMISQGASKVNIS 520
Query: 380 VVLKQEDCVRALRAAHSRFF 399
+++ E+ + +RA HS FF
Sbjct: 521 LIVNDEEAEQCVRALHSAFF 540
>AT5G13280.1 | chr5:4249516-4252654 FORWARD LENGTH=570
Length = 569
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 184/379 (48%), Gaps = 20/379 (5%)
Query: 31 VSNLKAMLRAICIAGHATESFSDFVVGHGEIWSAQLLSFAIKKSGTPCSWMDTREVLVVN 90
+ L+ +L+ I + T D++V GE S ++ + + G D E+ +
Sbjct: 178 LEELEQLLKGIAMMKELTLRTRDYLVSFGECLSTRIFAAYLNTIGVKARQYDAFEIGFIT 237
Query: 91 P---TGSNQVDPDYLESEKRLEKWFARQPAETIIATGFIAST-PENIPTTLKRDGSDFSA 146
T + ++ Y KRL + PA I+ TGF+ TTL R GSD +A
Sbjct: 238 TDDFTNGDILEATYPAVAKRLYDDWMHDPAVPIV-TGFLGKGWKTGAVTTLGRGGSDLTA 296
Query: 147 AIIGSLVKAGQVTIWTDVDGVFSADPRKVSEAVILSTLSYQEAWEMSYFGANVLHPRTII 206
IG + ++ +W DVDGV + DP A + L++ EA E++YFGA VLHP+++
Sbjct: 297 TTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTFDEAAELAYFGAQVLHPQSMR 356
Query: 207 PVMKYNIPIVIRNMFNISAPGTMICQQPANESGDLEACVKAFATIDK-LSLVNVEGTGMA 265
P + IP+ ++N +N APGT+I + + D+ + + + ++++++ T M
Sbjct: 357 PAREGEIPVRVKNSYNPKAPGTIITK-----TRDMTKSILTSIVLKRNVTMLDIASTRML 411
Query: 266 GVPGTASAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVAAVSAALHVRFREALSAGR 325
G G + +F +++G +V ++ A+SE S+ + ++ + +
Sbjct: 412 GQVGFLAKVFSIFEELGISVDVV--ATSEVSISLTLDPSKLWSRELIQQELDHVVEELEK 469
Query: 326 LSKVEVIHNCSILAAVGLKMASTPGVSATLFDALAKANINVRAIAQGCSEYNITVVLKQ- 384
++ V ++ +I++ +G + + + F L +NV+ I+QG S+ NI+ ++ +
Sbjct: 470 IAVVNLLKGRAIISLIG-NVQHSSLILERAFHVLYTKGVNVQMISQGASKVNISFIVNEA 528
Query: 385 --EDCVRALRAAHSRFFLS 401
E CV+AL H FF S
Sbjct: 529 EAEGCVQAL---HKSFFES 544
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,739,053
Number of extensions: 655104
Number of successful extensions: 1571
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1558
Number of HSP's successfully gapped: 6
Length of query: 763
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 657
Effective length of database: 8,200,473
Effective search space: 5387710761
Effective search space used: 5387710761
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)